FFCP PHASE1:Hg19::chr1:159175250..159175264,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=2532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |||
|TSSclassifier=not | |||
|UniProt=Q4VBN9 | |||
|association_with_transcript=23bp_to_BC095496_5end | |||
|coexpression_cluster_id=C1251 | |||
|description=CAGE_peak_9_at_DARC_5end | |||
|id=chr1:159175250..159175264,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.31e-21;1!UBERON:0006242;6.31e-21;1!UBERON:0007297;3.70e-11;2!UBERON:0009117;6.67e-09;10!UBERON:0005564;6.67e-09;10!UBERON:0006603;1.58e-08;65 | |||
|ontology_enrichment_disease=DOID:114!5.81e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.52e-44!115;UBERON:0002081!8.28e-11!2;UBERON:0002950!6.36e-10!2;UBERON:0001891!6.36e-10!2;UBERON:0009616!6.36e-10!2;UBERON:0002298!3.28e-09!8;UBERON:0004151!1.82e-07!3;UBERON:0006947!3.17e-07!3;UBERON:0004054!3.17e-07!3;UBERON:0001896!5.16e-07!3;UBERON:0005290!5.16e-07!3;UBERON:0010096!5.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;2.22e-40;2!UBERON:0004151;2.55e-27;3!UBERON:0002134;2.54e-21;1!UBERON:0005208;2.54e-21;1!UBERON:0004145;2.54e-21;1!UBERON:0005946;2.54e-21;1!UBERON:0005965;2.54e-21;1!UBERON:0002078;2.54e-21;1!UBERON:0002079;6.31e-21;1!UBERON:0001301;6.31e-21;1!UBERON:0002133;2.35e-11;2!UBERON:0001255;3.70e-11;2!UBERON:0001556;3.70e-11;2!UBERON:0003135;3.56e-08;11!UBERON:0003978;5.36e-08;3!UBERON:0000946;5.36e-08;3!UBERON:0002110;7.25e-08;3!UBERON:0006947;7.25e-08;3!UBERON:0004054;7.25e-08;3!UBERON:0002323;1.28e-07;45!UBERON:0004458;9.64e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,1.34e-40,2;UBERON:0010227,1.34e-40,2;UBERON:0004151,1.82e-27,3;UBERON:0002134,1.88e-21,1;UBERON:0005208,1.88e-21,1;UBERON:0005946,1.88e-21,1;UBERON:0005965,1.88e-21,1;UBERON:0002078,1.88e-21,1;UBERON:0002079,5.16e-21,1;UBERON:0001301,7.72e-21,1;UBERON:0007023,5.86e-17,114;UBERON:0002133,2.02e-11,2;UBERON:0001255,3.70e-11,2;UBERON:0001556,3.70e-11,2;UBERON:0003886,2.98e-09,54;UBERON:0002553,3.37e-08,61;UBERON:0003135,3.63e-08,11;UBERON:0003978,4.84e-08,3;UBERON:0009751,4.84e-08,3;UBERON:0000946,4.84e-08,3;UBERON:0002523,4.84e-08,3;UBERON:0005983,4.84e-08,3;UBERON:0004145,4.84e-08,3;UBERON:0002165,4.84e-08,3;UBERON:0002062,4.84e-08,3;UBERON:0007280,4.84e-08,3;UBERON:0002110,6.34e-08,3;UBERON:0006242,6.34e-08,3;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3;UBERON:0002323,3.19e-07,46;UBERON:0004458,8.51e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,1.49417096317547,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87149209830726,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,2.05325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0.318235791390825,0,0.217716747896961,0,0,0.645499848534087,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p9@DARC | |||
}} |
Revision as of 21:38, 10 January 2014
Short description: | p9@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_DARC_5end |
Coexpression cluster: | C1251_adipose_heart_left_trachea_dura_cervix_bladder |
Association with transcript: | 23bp_to_BC095496_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | Q4VBN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 1.34e-40 | 2 |
future cardiac atrium | 1.34e-40 | 2 |
cardiac chamber | 1.82e-27 | 3 |
tricuspid valve | 1.88e-21 | 1 |
right atrium valve | 1.88e-21 | 1 |
outflow tract of atrium | 1.88e-21 | 1 |
outflow part of right atrium | 1.88e-21 | 1 |
right cardiac atrium | 1.88e-21 | 1 |
left cardiac atrium | 5.16e-21 | 1 |
epididymis | 7.72e-21 | 1 |
adult organism | 5.86e-17 | 114 |
atrioventricular valve | 2.02e-11 | 2 |
urinary bladder | 3.70e-11 | 2 |
lower urinary tract | 3.70e-11 | 2 |
body cavity precursor | 2.98e-09 | 54 |
anatomical cavity | 3.37e-08 | 61 |
male reproductive organ | 3.63e-08 | 11 |
valve | 4.84e-08 | 3 |
cardiac mesenchyme | 4.84e-08 | 3 |
cardial valve | 4.84e-08 | 3 |
tunica intima | 4.84e-08 | 3 |
heart layer | 4.84e-08 | 3 |
outflow tract | 4.84e-08 | 3 |
endocardium | 4.84e-08 | 3 |
endocardial cushion | 4.84e-08 | 3 |
presumptive endocardium | 4.84e-08 | 3 |
gallbladder | 6.34e-08 | 3 |
gall bladder primordium | 6.34e-08 | 3 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |
body cavity | 3.19e-07 | 46 |
body cavity or lining | 8.51e-07 | 49 |