FFCP PHASE1:Hg19::chr1:206749218..206749229,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1293 | |||
|description=CAGE_peak_at_chr1:206749218..206749229,+ | |||
|id=chr1:206749218..206749229,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.41e-80!42;CL:0000766!3.01e-75!76;CL:0000860!1.11e-74!45;CL:0000839!9.76e-62!70;CL:0000557!9.30e-61!71;CL:0002194!7.97e-54!63;CL:0000576!7.97e-54!63;CL:0000040!7.97e-54!63;CL:0000559!7.97e-54!63;CL:0002009!5.98e-52!65;CL:0000763!3.07e-48!112;CL:0000049!3.07e-48!112;CL:0000738!1.68e-45!140;CL:0000037!3.12e-35!172;CL:0000566!3.12e-35!172;CL:0002031!2.90e-33!124;CL:0000988!9.28e-33!182;CL:0002087!1.01e-32!119;CL:0002032!1.64e-31!165;CL:0000837!1.64e-31!165;CL:0002393!6.47e-21!9;CL:0002397!6.47e-21!9;CL:0000875!1.34e-12!3;CL:0002396!1.34e-12!3;CL:0002274!1.93e-12!5;CL:0000457!1.93e-12!5;CL:0002191!1.93e-12!5;CL:0000097!1.93e-12!5;CL:0000831!1.93e-12!5;CL:0002028!1.93e-12!5;CL:0000094!2.58e-12!8;CL:0000134!9.13e-12!358;CL:0000842!1.21e-11!3;CL:0002320!2.39e-11!365;CL:0000219!7.01e-10!390;CL:0000771!3.38e-09!2;CL:0000081!7.40e-09!11;CL:0000224!7.59e-09!4;CL:0000048!3.95e-08!430;CL:0000723!6.99e-08!436;CL:0000034!1.46e-07!444;CL:0000163!6.31e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000766;5.01e-30;69!CL:0000860;9.56e-25;33!CL:0002057;9.56e-25;33!CL:0000576;9.58e-23;48!CL:0000473;1.03e-20;39!CL:0000234;1.03e-20;39!CL:0000771;1.71e-18;2!CL:0000094;8.14e-18;8!CL:0000763;1.05e-16;100!CL:0000097;6.93e-16;5!CL:0002393;5.62e-14;6!CL:0002397;5.62e-14;6!CL:0000081;5.09e-13;11!CL:0000875;9.94e-13;3!CL:0002396;9.94e-13;3!CL:0000163;4.51e-09;9!CL:0002087;2.64e-07;104!CL:0000219;6.06e-07;193!CL:0000738;9.01e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.45e-59,72;CL:0000860,3.36e-44,42;CL:0002057,3.36e-44,42;CL:0000473,9.80e-44,48;CL:0000234,9.80e-44,48;CL:0000839,1.49e-43,66;CL:0000557,7.21e-43,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002194,1.80e-34,59;CL:0000576,1.80e-34,59;CL:0000040,1.80e-34,59;CL:0000559,1.80e-34,59;CL:0002009,2.83e-33,61;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0002393,1.35e-24,9;CL:0002397,1.35e-24,9;CL:0000037,6.09e-24,168;CL:0002031,8.80e-23,120;CL:0000988,1.45e-22,177;CL:0000771,1.31e-18,2;CL:0000094,7.15e-18,8;CL:0002087,1.55e-16,115;CL:0000097,1.10e-15,5;CL:0002028,1.10e-15,5;CL:0000081,4.64e-13,11;CL:0000875,7.86e-13,3;CL:0002396,7.86e-13,3;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000163,5.80e-09,9;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-28;42!CL:0000049;3.10e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.49e-56!80;UBERON:0002390!5.62e-56!102;UBERON:0003061!5.62e-56!102;UBERON:0002193!8.67e-53!112;UBERON:0001474!1.08e-51!86;UBERON:0004765!8.90e-43!101;UBERON:0001434!8.90e-43!101;UBERON:0002405!5.35e-41!115;UBERON:0002204!4.89e-24!167;UBERON:0003081!1.67e-21!216;UBERON:0002384!8.83e-11!375;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-37,76;UBERON:0001474,1.37e-34,82;UBERON:0004765,2.74e-31,90;UBERON:0002405,3.40e-30,93;UBERON:0002390,1.62e-28,98;UBERON:0003061,1.62e-28,98;UBERON:0001434,6.80e-28,100;UBERON:0002193,1.26e-25,108;UBERON:0002204,1.53e-15,167;UBERON:0003081,3.06e-12,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,9.53e-07,315;UBERON:0004120,9.53e-07,315;UBERON:0006603,9.53e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.436194716338694,0,0.727752183563449,0.697287110717054,0,2.47765096716083,0.28769239232215,1.2808035326455,2.83778675866302,2.06847408441971,0.645484683583826,0,0.188242339542605,0,0.898893937780338,1.53041946185451,1.60464513538047,3.83602275479425,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,1.25624332628372,0,3.47502151528187,0,0.368277635987565,0.632924774881769,4.22510572623884,2.33864729961548,2.51590374610051,1.01095768031846,0.300353785683013,0.16072558669708,5.13022938734247,1.59133341759272,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,1.03664057770386,1.15295962733569,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:206749218..206749229,+ | |||
}} |
Revision as of 23:47, 10 January 2014
Short description: | p@chr1:206749218..206749229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206749218..206749229, + |
Coexpression cluster: | C1293_CD14_CD14CD16_Basophils_Mast_Eosinophils_Neutrophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-37 | 76 |
bone element | 1.37e-34 | 82 |
skeletal element | 2.74e-31 | 90 |
immune system | 3.40e-30 | 93 |
hematopoietic system | 1.62e-28 | 98 |
blood island | 1.62e-28 | 98 |
skeletal system | 6.80e-28 | 100 |
hemolymphoid system | 1.26e-25 | 108 |
musculoskeletal system | 1.53e-15 | 167 |
lateral plate mesoderm | 3.06e-12 | 203 |
connective tissue | 5.20e-09 | 371 |
mesoderm | 9.53e-07 | 315 |
mesoderm-derived structure | 9.53e-07 | 315 |
presumptive mesoderm | 9.53e-07 | 315 |