FFCP PHASE1:Hg19::chr1:224803809..224803852,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26802 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TBE1 | |||
|association_with_transcript=-142bp_to_ENST00000272133_5end | |||
|description=CAGE_peak_2_at_CNIH3_5end | |||
|id=chr1:224803809..224803852,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-31!180;CL:0000359!1.22e-15!32;CL:0000183!2.78e-15!59;CL:0000187!8.07e-15!54;CL:0000057!2.77e-14!75;CL:0000192!3.13e-14!42;CL:0000514!3.13e-14!42;CL:0000393!5.69e-14!60;CL:0000211!5.69e-14!60;CL:0000680!4.07e-13!57;CL:0000056!4.07e-13!57;CL:0000355!4.07e-13!57;CL:0002539!7.26e-09!10;CL:0000333!1.58e-08!41;CL:0002620!9.01e-08!23;CL:0000133!1.10e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-18;32!CL:0002539;2.64e-12;10!CL:0000192;8.59e-11;43!CL:0002551;2.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.16e-19,32;CL:0000192,2.13e-14,43;CL:0000514,2.13e-14,43;CL:0002539,2.51e-12,10;CL:0000187,3.65e-11,55;CL:0000393,1.28e-10,61;CL:0000211,1.28e-10,61;CL:0000680,4.19e-10,58;CL:0000056,4.19e-10,58;CL:0000355,4.19e-10,58;CL:0000057,6.26e-10,76;CL:0002551,2.06e-08,6;CL:0000333,1.89e-07,41;CL:0000133,5.04e-07,59;CL:0000048,7.60e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;8.59e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.39e-12;14!DOID:120;3.87e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.00e-12,14;DOID:120,3.92e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.77e-16!70;UBERON:0000914!1.65e-15!83;UBERON:0002329!1.65e-15!83;UBERON:0003077!1.65e-15!83;UBERON:0003059!1.65e-15!83;UBERON:0007282!1.65e-15!83;UBERON:0009618!1.65e-15!83;UBERON:0007285!1.65e-15!83;UBERON:0001637!4.09e-14!42;UBERON:0003509!4.09e-14!42;UBERON:0004572!4.09e-14!42;UBERON:0004573!4.17e-13!33;UBERON:0004571!4.17e-13!33;UBERON:0000486!1.25e-11!82;UBERON:0001134!3.68e-11!61;UBERON:0002036!3.68e-11!61;UBERON:0003082!3.68e-11!61;UBERON:0002385!9.12e-11!63;UBERON:0001015!9.12e-11!63;UBERON:0000383!9.12e-11!63;UBERON:0000475!3.54e-10!365;UBERON:0004237!7.26e-09!10;UBERON:0004695!7.26e-09!10;UBERON:0002111!7.26e-09!10;UBERON:0004178!7.26e-09!10;UBERON:0002199!5.43e-08!45;UBERON:0002416!5.43e-08!45;UBERON:0002049!5.78e-08!79;UBERON:0007798!5.78e-08!79;UBERON:0000467!1.06e-07!625;UBERON:0000480!1.41e-07!626;UBERON:0000119!1.63e-07!312;UBERON:0002067!1.69e-07!9;UBERON:0004016!1.69e-07!9;UBERON:0010083!1.69e-07!9;UBERON:0000483!2.10e-07!309;UBERON:0001981!2.56e-07!60;UBERON:0007500!2.56e-07!60;UBERON:0004537!2.56e-07!60;UBERON:0006965!2.56e-07!60;UBERON:0002097!3.23e-07!40;UBERON:0000947!3.82e-07!21;UBERON:0010191!3.82e-07!21;UBERON:0000956!5.98e-07!25;UBERON:0000203!5.98e-07!25;UBERON:0004872!6.85e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.19e-16;33!UBERON:0004571;2.19e-16;33!UBERON:0001637;3.10e-13;42!UBERON:0003509;3.10e-13;42!UBERON:0004572;3.10e-13;42!UBERON:0004237;2.64e-12;10!UBERON:0004695;2.64e-12;10!UBERON:0002111;2.64e-12;10!UBERON:0004178;2.64e-12;10!UBERON:0000947;2.17e-10;21!UBERON:0010191;2.17e-10;21!UBERON:0002067;7.57e-09;9!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0000992;4.25e-08;13!UBERON:0001135;3.67e-07;15!UBERON:0001950;5.60e-07;20!UBERON:0001869;5.94e-07;32!UBERON:0002619;6.03e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.01e-20,42;UBERON:0003509,9.01e-20,42;UBERON:0004572,9.01e-20,42;UBERON:0004573,4.45e-18,33;UBERON:0004571,4.45e-18,33;UBERON:0003077,2.06e-14,72;UBERON:0007285,2.06e-14,72;UBERON:0007524,4.86e-14,73;UBERON:0002329,6.02e-14,71;UBERON:0003059,6.02e-14,71;UBERON:0007282,6.02e-14,71;UBERON:0004290,6.02e-14,71;UBERON:0009618,6.02e-14,71;UBERON:0007503,2.18e-12,78;UBERON:0004237,2.51e-12,10;UBERON:0004695,2.51e-12,10;UBERON:0002111,2.51e-12,10;UBERON:0004178,2.51e-12,10;UBERON:0007500,4.97e-11,59;UBERON:0001981,4.97e-11,59;UBERON:0004537,4.97e-11,59;UBERON:0006965,4.97e-11,59;UBERON:0000947,2.07e-10,21;UBERON:0010191,2.07e-10,21;UBERON:0000486,3.39e-10,83;UBERON:0004872,3.69e-09,83;UBERON:0010314,6.14e-09,132;UBERON:0001134,7.18e-09,62;UBERON:0002036,7.18e-09,62;UBERON:0003082,7.18e-09,62;UBERON:0002067,7.67e-09,9;UBERON:0004016,7.67e-09,9;UBERON:0010083,7.67e-09,9;UBERON:0000956,1.22e-08,25;UBERON:0000203,1.22e-08,25;UBERON:0000055,2.51e-08,68;UBERON:0002385,2.55e-08,64;UBERON:0001015,2.55e-08,64;UBERON:0000383,2.55e-08,64;UBERON:0000992,3.83e-08,13;UBERON:0002049,6.95e-08,78;UBERON:0007798,6.95e-08,78;UBERON:0001869,2.00e-07,32;UBERON:0001135,3.56e-07,15;UBERON:0001950,6.68e-07,20;UBERON:0000025,6.78e-07,192;UBERON:0002619,7.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,8.2123583545488,0,0.245733936501509,0,0,0,0,0,10.7572023432284,10.2458069764076,9.49403117503585,10.7345215733912,1.96993692922861,1.63200552995402,0.940364164434263,2.57612388417951,3.55873505189499,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,2.3858578411533,0,0.283604451492204,1.10864698731282,0.263504357079378,0.458426764241994,0,0,3.8945687238562,4.70150290708022,6.91381394698099,0,0,0,0,3.4409383804245,0,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,4.93858995491861,6.22323149822128,4.30254931123221,3.19201543978521,0.560677600142307,2.1349799145941,2.4666754841716,0.622422070799533,0.404132016209064,0.490385709340376,0.454072282934794,0.576175924479999,1.64025002283658,11.5499228427219,7.98660550162229,10.0130615969707,9.74706338743249,7.93177427403845,8.9888516289439,1.42907919878425,11.9149287792415,1.44656093646072,2.37600571456411,0.989067717114227,0.910161361938026,0,10.4368390651521,7.00663711282999,1.38532057742091,2.19488810440419,0,0.600952235626387,0.113432183160021,2.15267562826634,0,0.635795703478686,2.70081986475962,1.13357782162283,0,0,2.36286865137773,0.974370051611986,0.757301322732344,0.552299391853796,0.161646056818812,1.77504796258307,2.01504196455281,0.67824236924195,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.932949495138334,0.504641701751257,0,3.12899064659632,0.643240938192885,8.28809528114883,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,1.62904152655162,5.19967392639789,2.88662684050547,0.231860809950154,0.117408694235822,0,0.462985512576611,0,0,0,1.47730203652438,4.91408956792399,3.41851673264075,0,0,0.141775097242386,0.268675568108545,2.03443756959773,1.53353071666084,0,0,1.65862492432618,1.15295962733569,0.37872730027914,1.14296209725904,1.90994212779139,0,5.13217338068116,0.514137463516618,6.9078903304101,0.285826432630578,0.336393253036082,0,0.66004457238855,3.36106460970222,0,3.381211010224,0.531876233169741,0,0.771622122786426,0,0,0,0,0,4.56030658011229,0,0,3.01439377059586,0.871533458600294,0.299918973546171,1.2162378064119,0.502257091432126,4.21667878966063,0,0,7.13184525203592,0,0,0,0,0,0.215627574859517,0,8.13102797511883,5.20559415430487,0,1.84267891867784,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0,0,0,1.32845119707087,0.737476674166813,3.0409265063829,1.37060810223918,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.512556597022804,0,0,0,11.5657270351992,9.76589489222199,7.1450625732014,10.904343012856,8.25093687065711,0,0.200506470303285,0,0.229628896329213,0.546273504020151,0,0,0,0,0,0.105551628892876,0,0,0,0,2.16757150035082,0.501689773854853,0,0,0,0,0,0.769350375349168,0.656029291399411,1.62689197332152,0,0,0,1.72279661398852,1.95018073810956,0,2.22342652071881,0.308097234229289,0.614014698904518,0.827019434907183,0.107420244868274,0.145016693914229,0.767039646744908,0.445160178233687,0,0,0,0.10115778085555,4.18360994367557,3.77774816196768,9.7585217822484,8.00887308457831,4.7907542728532,13.0489948811261,5.93037501132544,1.00187420719394,0.372158369359667,0,0,0.511795582622668,0,7.95508119814842,0.78494864019923,0,0.274537029736055,0.235624804691373,5.25674452090622,3.17020642346017,7.16139375606268,0,6.09283724078211,2.11300293513511,0.272999822815972,0.282810863907425,22.6016233240486,3.85955740482287,3.3171948762061,1.75380354101505,0,1.31178950409327,5.68149055495571,6.8161169581945,9.01425928103173,0.717056761020258,0,5.35006577221875,2.48332744849418,0.211107635297664,0,7.5894634753143,1.39973888097993,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0,1.82870241333667,5.12020043105367,0,0,0.19924798825107,0,1.0077309914171,18.2038254853836,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,1.57705766875147,3.99227596002388,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,0.153900517007594,0,0,0,0.325942115766024,0,1.37396390102793,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,10.439556319966,0,0,2.14250933141343,0.126373159256976,0,1.34794648816421,1.32930774541437,1.98595173525299,1.56966459203613,2.38944859545918,0,0.416024019039416,0,0,0,0.34945333648406,0,0,0,0,0,0,0,4.11125773940253,0.993573058514948,1.26621591911757,0,2.00397050628834,0,0.19980960958213,0.144090417154106,0,1.37275998289572,1.4405479798815,0.49701014226173,0,1.22313785466253,1.150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| |||
|short_description=p2@CNIH3 | |||
}} |
Revision as of 00:25, 11 January 2014
Short description: | p2@CNIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNIH3_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_ENST00000272133_5end |
EntrezGene: | CNIH3 |
HGNC: | 26802 |
UniProt: | Q8TBE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.16e-19 | 32 |
smooth muscle cell | 2.13e-14 | 43 |
smooth muscle myoblast | 2.13e-14 | 43 |
aortic smooth muscle cell | 2.51e-12 | 10 |
muscle cell | 3.65e-11 | 55 |
electrically responsive cell | 1.28e-10 | 61 |
electrically active cell | 1.28e-10 | 61 |
muscle precursor cell | 4.19e-10 | 58 |
myoblast | 4.19e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.19e-10 | 58 |
fibroblast | 6.26e-10 | 76 |
fibroblast of dermis | 2.06e-08 | 6 |
migratory neural crest cell | 1.89e-07 | 41 |
neurectodermal cell | 5.04e-07 | 59 |
multi fate stem cell | 7.60e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.00e-12 | 14 |
female reproductive organ cancer | 3.92e-07 | 27 |