FFCP PHASE1:Hg19::chr10:14613932..14613943,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=54bp_to_ENST00000464952_5end | |||
|coexpression_cluster_id=C2996 | |||
|description=CAGE_peak_9_at_FAM107B_5end | |||
|id=chr10:14613932..14613943,- | |||
|ontology_enrichment_celltype=CL:0000791!4.24e-28!18;CL:0000789!4.24e-28!18;CL:0002420!4.24e-28!18;CL:0002419!4.24e-28!18;CL:0000790!4.24e-28!18;CL:0000625!1.13e-19!11;CL:0000084!1.19e-18!25;CL:0000827!1.19e-18!25;CL:0000624!4.84e-12!6;CL:0000838!1.29e-10!52;CL:0000542!2.67e-10!53;CL:0000051!2.67e-10!53;CL:0000738!2.85e-07!140;CL:0002087!5.50e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.65e-50;18!CL:0000789;7.65e-50;18!CL:0002419;7.65e-50;18!CL:0000084;1.35e-34;25!CL:0000625;3.66e-34;11!CL:0000624;1.98e-20;6!CL:0000898;8.09e-11;3!CL:0000623;9.70e-11;3!CL:0000542;1.88e-10;53!CL:0000815;1.51e-07;2!CL:0000792;1.51e-07;2!CL:0002677;1.51e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.08e-50,18;CL:0000789,7.08e-50,18;CL:0002420,7.08e-50,18;CL:0002419,7.08e-50,18;CL:0000790,7.08e-50,18;CL:0000084,1.28e-34,25;CL:0000827,1.28e-34,25;CL:0000625,3.31e-34,11;CL:0000838,1.44e-20,52;CL:0000624,2.02e-20,6;CL:0000542,4.44e-20,53;CL:0000051,4.44e-20,53;CL:0000898,7.73e-11,3;CL:0000623,1.04e-10,3;CL:0000825,1.04e-10,3;CL:0002087,4.18e-09,115;CL:0000815,1.46e-07,2;CL:0000792,1.46e-07,2;CL:0002677,1.46e-07,2;CL:0000738,6.75e-07,136;CL:0002031,8.50e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.65e-50;18!CL:0000051;1.88e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.97e-39!57;UBERON:0005068!5.97e-39!57;UBERON:0006241!5.97e-39!57;UBERON:0007135!5.97e-39!57;UBERON:0007023!4.74e-37!115;UBERON:0002616!4.07e-31!59;UBERON:0002780!3.76e-29!41;UBERON:0001890!3.76e-29!41;UBERON:0006240!3.76e-29!41;UBERON:0001893!4.52e-29!34;UBERON:0002020!5.52e-29!34;UBERON:0003528!5.52e-29!34;UBERON:0003080!3.01e-28!42;UBERON:0002791!8.91e-28!33;UBERON:0001869!3.54e-26!32;UBERON:0000955!4.62e-26!69;UBERON:0006238!4.62e-26!69;UBERON:0001017!2.48e-24!82;UBERON:0000073!5.09e-23!94;UBERON:0001016!5.09e-23!94;UBERON:0005743!1.21e-22!86;UBERON:0003075!1.18e-21!86;UBERON:0007284!1.18e-21!86;UBERON:0002619!2.08e-20!22;UBERON:0002346!3.68e-20!90;UBERON:0001950!6.30e-18!20;UBERON:0000956!2.01e-17!25;UBERON:0000203!2.01e-17!25;UBERON:0003056!9.91e-17!61;UBERON:0002308!5.63e-14!9;UBERON:0000125!5.63e-14!9;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0002420!1.86e-13!9;UBERON:0007245!1.86e-13!9;UBERON:0010009!1.86e-13!9;UBERON:0010011!1.86e-13!9;UBERON:0000454!1.86e-13!9;UBERON:0000178!1.67e-12!15;UBERON:0000179!1.67e-12!15;UBERON:0000463!1.67e-12!15;UBERON:0000033!2.80e-12!123;UBERON:0003076!1.24e-11!15;UBERON:0003057!1.24e-11!15;UBERON:0009663!4.35e-11!7;UBERON:0002298!2.63e-10!8;UBERON:0004732!1.87e-09!13;UBERON:0000200!5.46e-09!6;UBERON:0004121!8.26e-09!169;UBERON:0001871!1.63e-08!7;UBERON:0000924!2.37e-08!173;UBERON:0006601!2.37e-08!173;UBERON:0004733!5.76e-08!12;UBERON:0002028!5.76e-08!12;UBERON:0007277!5.76e-08!12;UBERON:0000349!5.84e-08!5;UBERON:0000369!8.46e-07!4;UBERON:0002435!8.46e-07!4;UBERON:0000204!8.46e-07!4;UBERON:0010082!8.46e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-18;15!UBERON:0000179;1.37e-18;15!UBERON:0000463;1.37e-18;15!UBERON:0002780;2.90e-09;41!UBERON:0001890;2.90e-09;41!UBERON:0002298;5.57e-09;6!UBERON:0000125;2.42e-08;9!UBERON:0002308;2.42e-08;9!UBERON:0005162;4.26e-08;2!UBERON:0000122;4.26e-08;2!UBERON:0003528;9.06e-08;34!UBERON:0002020;9.06e-08;34!UBERON:0001893;1.36e-07;34!UBERON:0002390;1.63e-07;32!UBERON:0009663;4.10e-07;7!UBERON:0000073;4.78e-07;53!UBERON:0002616;4.78e-07;53!UBERON:0001897;6.52e-07;2!UBERON:0010225;6.52e-07;2!UBERON:0002791;7.88e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.69e-19,15;UBERON:0000179,8.69e-19,15;UBERON:0000463,8.69e-19,15;UBERON:0001049,8.63e-15,56;UBERON:0005068,8.63e-15,56;UBERON:0006241,8.63e-15,56;UBERON:0007135,8.63e-15,56;UBERON:0007023,3.47e-14,114;UBERON:0000073,5.90e-14,53;UBERON:0002616,5.90e-14,53;UBERON:0000955,4.52e-11,68;UBERON:0006238,4.52e-11,68;UBERON:0002780,7.15e-11,41;UBERON:0001890,7.15e-11,41;UBERON:0003080,7.15e-11,41;UBERON:0006240,7.15e-11,41;UBERON:0003075,5.28e-10,82;UBERON:0007284,5.28e-10,82;UBERON:0001017,7.39e-10,81;UBERON:0001016,1.30e-09,89;UBERON:0002346,2.48e-09,86;UBERON:0002298,5.70e-09,6;UBERON:0000125,2.66e-08,9;UBERON:0002308,2.66e-08,9;UBERON:0001893,2.92e-08,34;UBERON:0003528,3.18e-08,34;UBERON:0002020,3.18e-08,34;UBERON:0005162,4.56e-08,2;UBERON:0000122,4.56e-08,2;UBERON:0003056,1.28e-07,61;UBERON:0002791,3.30e-07,32;UBERON:0009663,4.82e-07,7;UBERON:0010371,5.75e-07,104;UBERON:0001897,6.95e-07,2;UBERON:0010225,6.95e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,1.08505435357926,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,13.5729741378545,7.07419372948497,6.16804496998528,0,9.45174573237412,4.73447805734733,3.89653456815823,0,1.47302953737419,1.77227115666897,1.62482318259009,0,0.130059347559878,1.47994114143309,0.552700035571697,2.89803085735052,13.0492175582613,12.0393372640371,7.31748666634838,1.13309342697566,9.58051234004803,7.90343124610049,7.08455137654608,7.64556994377832,1.30216690771284,1.90090408889675,6.77588035849977,4.73550461271348,3.74792179657038,2.36777252044017,3.28451198768419,3.22570789159572,2.40696176205157,8.25499102131954,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,3.23441362289276,4.49200626979119,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,1.52927441428475,1.13929437434833,1.90585420366231,2.87953591160336,1.94541993357815,3.24018862342869,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,1.39152147242777,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1114691118213,0,1.40558667435203,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97350799631566,0.79339561045614,0,0,0,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.1251909307065,2.29363678276028,0.332787154610557,4.22255540001407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.09189682663981,1.41696576325585,0.319267718114302,0.82046545696302,0,0.691572524642179,0.968853873791107,15.704636228507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,3.90539049306924,0,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,3.39848664884159,1.18390992413128,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,5.10402014498858,0.297046400327086,0.8453114551668,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0.458729283404541,1.29005624836306,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.13776295448085,0,0,0.452122368852043,0.248298857183432,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p9@FAM107B | |||
}} |
Revision as of 01:50, 11 January 2014
Short description: | p9@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FAM107B_5end |
Coexpression cluster: | C2996_optic_CD4_corpus_thalamus_globus_spinal_diencephalon |
Association with transcript: | 54bp_to_ENST00000464952_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.08e-50 | 18 |
alpha-beta T cell | 7.08e-50 | 18 |
immature T cell | 7.08e-50 | 18 |
mature T cell | 7.08e-50 | 18 |
immature alpha-beta T cell | 7.08e-50 | 18 |
T cell | 1.28e-34 | 25 |
pro-T cell | 1.28e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.31e-34 | 11 |
lymphoid lineage restricted progenitor cell | 1.44e-20 | 52 |
CD4-positive, alpha-beta T cell | 2.02e-20 | 6 |
lymphocyte | 4.44e-20 | 53 |
common lymphoid progenitor | 4.44e-20 | 53 |
naive T cell | 7.73e-11 | 3 |
natural killer cell | 1.04e-10 | 3 |
pro-NK cell | 1.04e-10 | 3 |
nongranular leukocyte | 4.18e-09 | 115 |
regulatory T cell | 1.46e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.46e-07 | 2 |
naive regulatory T cell | 1.46e-07 | 2 |
leukocyte | 6.75e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 8.50e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.69e-19 | 15 |
haemolymphatic fluid | 8.69e-19 | 15 |
organism substance | 8.69e-19 | 15 |
neural tube | 8.63e-15 | 56 |
neural rod | 8.63e-15 | 56 |
future spinal cord | 8.63e-15 | 56 |
neural keel | 8.63e-15 | 56 |
adult organism | 3.47e-14 | 114 |
regional part of nervous system | 5.90e-14 | 53 |
regional part of brain | 5.90e-14 | 53 |
brain | 4.52e-11 | 68 |
future brain | 4.52e-11 | 68 |
regional part of forebrain | 7.15e-11 | 41 |
forebrain | 7.15e-11 | 41 |
anterior neural tube | 7.15e-11 | 41 |
future forebrain | 7.15e-11 | 41 |
neural plate | 5.28e-10 | 82 |
presumptive neural plate | 5.28e-10 | 82 |
central nervous system | 7.39e-10 | 81 |
nervous system | 1.30e-09 | 89 |
neurectoderm | 2.48e-09 | 86 |
brainstem | 5.70e-09 | 6 |
neural nucleus | 2.66e-08 | 9 |
nucleus of brain | 2.66e-08 | 9 |
telencephalon | 2.92e-08 | 34 |
brain grey matter | 3.18e-08 | 34 |
gray matter | 3.18e-08 | 34 |
multi cell component structure | 4.56e-08 | 2 |
neuron projection bundle | 4.56e-08 | 2 |
pre-chordal neural plate | 1.28e-07 | 61 |
regional part of telencephalon | 3.30e-07 | 32 |
telencephalic nucleus | 4.82e-07 | 7 |
ecto-epithelium | 5.75e-07 | 104 |
dorsal plus ventral thalamus | 6.95e-07 | 2 |
thalamic complex | 6.95e-07 | 2 |