FFCP PHASE1:Hg19::chr12:18243103..18243118,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=79785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26213 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H628 | |||
|association_with_transcript=0bp_to_NM_024730,uc001rdq.2,uc001rdr.2_5end | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_2_at_RERGL_5end | |||
|id=chr12:18243103..18243118,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.16e-10;2!UBERON:0006603;1.47e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-92!115;UBERON:0001049!8.44e-41!57;UBERON:0005068!8.44e-41!57;UBERON:0006241!8.44e-41!57;UBERON:0007135!8.44e-41!57;UBERON:0002616!1.61e-36!59;UBERON:0001017!1.23e-33!82;UBERON:0002346!2.24e-33!90;UBERON:0002780!2.83e-33!41;UBERON:0001890!2.83e-33!41;UBERON:0006240!2.83e-33!41;UBERON:0005743!3.12e-33!86;UBERON:0000955!4.57e-33!69;UBERON:0006238!4.57e-33!69;UBERON:0001893!6.39e-33!34;UBERON:0002020!1.46e-32!34;UBERON:0003528!1.46e-32!34;UBERON:0003080!2.70e-32!42;UBERON:0003075!9.64e-32!86;UBERON:0007284!9.64e-32!86;UBERON:0002791!3.50e-31!33;UBERON:0001869!1.93e-29!32;UBERON:0000073!5.99e-29!94;UBERON:0001016!5.99e-29!94;UBERON:0002619!1.47e-21!22;UBERON:0003056!2.46e-21!61;UBERON:0001950!4.06e-21!20;UBERON:0000153!3.39e-20!129;UBERON:0007811!3.39e-20!129;UBERON:0000956!1.59e-18!25;UBERON:0000203!1.59e-18!25;UBERON:0000033!2.96e-18!123;UBERON:0002308!4.48e-17!9;UBERON:0000125!4.48e-17!9;UBERON:0000924!2.04e-15!173;UBERON:0006601!2.04e-15!173;UBERON:0004121!3.15e-14!169;UBERON:0009663!7.31e-14!7;UBERON:0002420!1.41e-13!9;UBERON:0007245!1.41e-13!9;UBERON:0010009!1.41e-13!9;UBERON:0010011!1.41e-13!9;UBERON:0000454!1.41e-13!9;UBERON:0000025!9.08e-12!194;UBERON:0004111!1.03e-11!241;UBERON:0000477!3.09e-11!286;UBERON:0001872!4.33e-10!5;UBERON:0003076!1.47e-09!15;UBERON:0003057!1.47e-09!15;UBERON:0002298!2.57e-09!8;UBERON:0000481!1.18e-08!347;UBERON:0000200!2.12e-08!6;UBERON:0000062!2.51e-08!511;UBERON:0000369!2.79e-08!4;UBERON:0002435!2.79e-08!4;UBERON:0000204!2.79e-08!4;UBERON:0010082!2.79e-08!4;UBERON:0000475!2.90e-08!365;UBERON:0000483!1.13e-07!309;UBERON:0004733!1.67e-07!12;UBERON:0002028!1.67e-07!12;UBERON:0007277!1.67e-07!12;UBERON:0006947!1.74e-07!3;UBERON:0004054!1.74e-07!3;UBERON:0000119!1.80e-07!312;UBERON:0000922!2.26e-07!612;UBERON:0000468!2.46e-07!659;UBERON:0000988!6.43e-07!3;UBERON:0002021!7.59e-07!5;UBERON:0004732!7.71e-07!13;UBERON:0006331!8.22e-07!3;UBERON:0000064!9.39e-07!219;UBERON:0002050!9.76e-07!605;UBERON:0005423!9.76e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.29e-15;114!UBERON:0002360;1.50e-11;2!UBERON:0000094;1.50e-11;2!UBERON:0010743;1.50e-11;2!UBERON:0002780;2.51e-08;41!UBERON:0001890;2.51e-08;41!UBERON:0001893;4.69e-08;34!UBERON:0006947;9.95e-08;3!UBERON:0004054;9.95e-08;3!UBERON:0003135;1.15e-07;11!UBERON:0000073;1.65e-07;53!UBERON:0002616;1.65e-07;53!UBERON:0009663;9.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.79e-55,114;UBERON:0002360,1.63e-11,2;UBERON:0000094,1.63e-11,2;UBERON:0010743,1.63e-11,2;UBERON:0001049,2.09e-11,56;UBERON:0005068,2.09e-11,56;UBERON:0006241,2.09e-11,56;UBERON:0007135,2.09e-11,56;UBERON:0000073,2.66e-10,53;UBERON:0002616,2.66e-10,53;UBERON:0001017,8.31e-10,81;UBERON:0001893,1.80e-09,34;UBERON:0002780,1.90e-09,41;UBERON:0001890,1.90e-09,41;UBERON:0003080,1.90e-09,41;UBERON:0006240,1.90e-09,41;UBERON:0001016,1.51e-08,89;UBERON:0002346,7.33e-08,86;UBERON:0006947,1.30e-07,3;UBERON:0004054,1.30e-07,3;UBERON:0003135,1.30e-07,11;UBERON:0000955,2.00e-07,68;UBERON:0006238,2.00e-07,68;UBERON:0003075,4.89e-07,82;UBERON:0007284,4.89e-07,82;UBERON:0009663,8.42e-07,7;UBERON:0010314,9.75e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0.562677665642051,0,0,0,1.19548792950642,0.552567831062295,0,0,0,0,0,0,0,1.87422470710174,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0.295547618953547,4.38770794307945,0,0,7.8489263673873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85760885457012,0.611030144933625,0,0,0,1.01101699471016,0.802577647298789,0.702793337176017,0,0,0,1.18375320854817,0,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,5.06707337901887,0,0,0,0,1.45483524732629,0,0.451961481561065,0,0,1.32952671507345,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,1.03274246318642,0,2.83700546277113,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.92562821219883,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.876336514945499,0,0.998361463831671,1.61450647647597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.8054059043022,0.247871528518004,0,0,0,0,0,0,1.34881372702565,1.41696576325585,0.319267718114302,1.02558182120378,0,0.553258019713743,1.29180516505481,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,1.14813893851271,0.781078098613847,0.620060389503552,0.697573912132975,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0.227662191351298,0,0,0,1.83518279037446,0.855046056317038,0,0,2.51177897121645,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0,0.385870790539723,0,0,1.96118657403124,0,0.588925401344836,1.18818560130834,0,0,0.281951753939561,0,0,0,0,0,0,0,1.29005624836306,0,0.951880862672806,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.18270532516606,0,0,1.13776295448085,1.70587185520785,0.476128862927481,0.0645889098360061,0,0,2.03670906490128,0.404234377916439,1.30630048738177,0,0.202056159043763,1.43444410785353,0.332660356546013,0,0,0,0,0,1.833621662743,1.22068853494722,1.99727032255654,1.00636896795513,0 | |||
|short_description=p2@RERGL | |||
}} |
Revision as of 12:31, 11 January 2014
Short description: | p2@RERGL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_RERGL_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 0bp_to_NM_024730, uc001rdq.2, uc001rdr.2_5end |
EntrezGene: | RERGL |
HGNC: | 26213 |
UniProt: | Q9H628 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.79e-55 | 114 |
meninx | 1.63e-11 | 2 |
membrane organ | 1.63e-11 | 2 |
meningeal cluster | 1.63e-11 | 2 |
neural tube | 2.09e-11 | 56 |
neural rod | 2.09e-11 | 56 |
future spinal cord | 2.09e-11 | 56 |
neural keel | 2.09e-11 | 56 |
regional part of nervous system | 2.66e-10 | 53 |
regional part of brain | 2.66e-10 | 53 |
central nervous system | 8.31e-10 | 81 |
telencephalon | 1.80e-09 | 34 |
regional part of forebrain | 1.90e-09 | 41 |
forebrain | 1.90e-09 | 41 |
anterior neural tube | 1.90e-09 | 41 |
future forebrain | 1.90e-09 | 41 |
nervous system | 1.51e-08 | 89 |
neurectoderm | 7.33e-08 | 86 |
male genital duct | 1.30e-07 | 3 |
internal male genitalia | 1.30e-07 | 3 |
male reproductive organ | 1.30e-07 | 11 |
brain | 2.00e-07 | 68 |
future brain | 2.00e-07 | 68 |
neural plate | 4.89e-07 | 82 |
presumptive neural plate | 4.89e-07 | 82 |
telencephalic nucleus | 8.42e-07 | 7 |
structure with developmental contribution from neural crest | 9.75e-07 | 132 |