FFCP PHASE1:Hg19::chr12:52913675..52913704,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913675..52913704,+ | |||
|id=chr12:52913675..52913704,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.30e-28!43;CL:0000066!4.14e-21!254;CL:0000223!3.76e-20!59;CL:0002251!4.62e-17!21;CL:0002159!1.81e-16!13;CL:0002368!2.40e-16!13;CL:0000076!2.56e-12!62;CL:0000622!2.65e-11!5;CL:0002077!3.84e-10!33;CL:0000244!1.27e-09!4;CL:0000731!1.27e-09!4;CL:0002202!2.21e-09!9;CL:0002632!2.21e-09!9;CL:0000154!2.44e-09!6;CL:0002328!3.50e-08!3;CL:0000068!4.62e-08!3;CL:0000069!4.62e-08!3;CL:0000307!4.62e-08!3;CL:0000377!4.62e-08!3;CL:0000349!1.02e-07!3;CL:0002577!1.02e-07!3;CL:0002623!1.22e-07!3;CL:0002621!1.70e-07!3;CL:0002166!1.78e-07!3;CL:0000362!2.66e-07!8;CL:0000240!5.98e-07!6;CL:0000311!5.98e-07!6;CL:0000079!5.98e-07!6;CL:0000237!5.98e-07!6;CL:0000036!5.98e-07!6;CL:0000357!5.98e-07!6;CL:0000114!5.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.10e-22;13!CL:0002076;3.90e-22;42!CL:0002159;4.82e-21;14!CL:0002202;1.91e-15;9!CL:0002632;1.91e-15;9!CL:0002328;9.06e-13;3!CL:0000307;1.72e-12;3!CL:0002577;5.41e-12;3!CL:0002621;1.12e-11;3!CL:0002166;1.38e-11;3!CL:0002077;2.19e-11;34!CL:0000240;3.74e-11;6!CL:0000311;3.74e-11;6!CL:0000079;3.74e-11;6!CL:0000237;3.74e-11;6!CL:0002251;5.11e-11;20!CL:0002327;2.22e-09;4!CL:0000244;2.99e-09;4!CL:0000731;2.99e-09;4!CL:0000575;3.51e-09;2!CL:0000312;5.31e-08;5!CL:0000622;1.48e-07;5!CL:0000362;2.66e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.31e-28,42;CL:0002368,1.63e-22,13;CL:0002159,4.82e-21,14;CL:0000066,1.12e-20,253;CL:0000223,4.16e-19,58;CL:0002202,1.71e-15,9;CL:0002632,1.71e-15,9;CL:0002077,1.79e-13,34;CL:0002328,9.07e-13,3;CL:0000068,1.45e-12,3;CL:0000069,1.45e-12,3;CL:0000307,1.45e-12,3;CL:0000377,1.45e-12,3;CL:0002577,5.51e-12,3;CL:0002621,1.30e-11,3;CL:0002166,1.40e-11,3;CL:0000240,3.65e-11,6;CL:0000311,3.65e-11,6;CL:0000079,3.65e-11,6;CL:0000237,3.65e-11,6;CL:0000036,3.65e-11,6;CL:0000357,3.65e-11,6;CL:0000114,3.65e-11,6;CL:0002251,5.68e-11,20;CL:0002327,2.04e-09,4;CL:0000244,2.79e-09,4;CL:0000731,2.79e-09,4;CL:0000575,3.80e-09,2;CL:0000312,5.25e-08,5;CL:0002321,7.95e-08,250;CL:0000622,1.46e-07,5;CL:0000362,2.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.72e-12;3!CL:0000357;3.74e-11;6!CL:0000114;3.74e-11;6!CL:0000223;8.13e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!8.44e-19!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.82e-17!72;UBERON:0004119!2.46e-15!169;UBERON:0000925!2.46e-15!169;UBERON:0006595!2.46e-15!169;UBERON:0000166!1.16e-14!21;UBERON:0000161!1.48e-13!35;UBERON:0000165!4.30e-12!28;UBERON:0000930!4.30e-12!28;UBERON:0000974!1.70e-11!10;UBERON:0000365!3.91e-11!5;UBERON:0000065!6.36e-11!53;UBERON:0005631!8.56e-11!14;UBERON:0000158!8.56e-11!14;UBERON:0003729!1.45e-10!5;UBERON:0003102!8.97e-10!95;UBERON:0007196!2.00e-09!14;UBERON:0001558!2.00e-09!14;UBERON:0005910!3.36e-09!6;UBERON:0001987!4.19e-09!4;UBERON:0004340!4.19e-09!4;UBERON:0003343!1.97e-08!4;UBERON:0004785!1.97e-08!4;UBERON:0004815!3.50e-08!3;UBERON:0002031!3.50e-08!3;UBERON:0006562!6.09e-08!11;UBERON:0000072!6.26e-08!46;UBERON:0003126!6.48e-08!7;UBERON:0001005!6.48e-08!7;UBERON:0001444!6.77e-08!48;UBERON:0000077!1.60e-07!130;UBERON:0000344!1.67e-07!12;UBERON:0003124!1.68e-07!7;UBERON:0001949!1.70e-07!3;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0001723!4.22e-07!3;UBERON:0001033!4.22e-07!3;UBERON:0010056!4.22e-07!3;UBERON:0005178!8.19e-07!34;UBERON:0002224!8.19e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.06e-13;3!UBERON:0002031;9.06e-13;3!UBERON:0001949;1.12e-11;3!UBERON:0000486;9.58e-11;12!UBERON:0000165;2.06e-09;28!UBERON:0001911;2.22e-09;4!UBERON:0001987;4.18e-09;4!UBERON:0007196;5.56e-09;15!UBERON:0001558;5.56e-09;15!UBERON:0001708;8.36e-09;4!UBERON:0008895;8.36e-09;4!UBERON:0002185;8.12e-08;5!UBERON:0000365;1.77e-07;5!UBERON:0011159;3.98e-07;5!UBERON:0003729;4.91e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.02e-13,99;UBERON:0004815,9.07e-13,3;UBERON:0002031,9.07e-13,3;UBERON:0004119,1.22e-11,160;UBERON:0000925,1.22e-11,160;UBERON:0006595,1.22e-11,160;UBERON:0001949,1.30e-11,3;UBERON:0001004,8.63e-11,74;UBERON:0000033,4.38e-10,56;UBERON:0000166,9.85e-10,22;UBERON:0001911,2.04e-09,4;UBERON:0005333,2.04e-09,4;UBERON:0008425,2.04e-09,4;UBERON:0005311,2.04e-09,4;UBERON:0001987,4.24e-09,4;UBERON:0004340,4.24e-09,4;UBERON:0007196,5.21e-09,15;UBERON:0001558,5.21e-09,15;UBERON:0000165,5.22e-09,29;UBERON:0000930,5.22e-09,29;UBERON:0000153,8.18e-09,62;UBERON:0007811,8.18e-09,62;UBERON:0001708,8.47e-09,4;UBERON:0008895,8.47e-09,4;UBERON:0000161,1.47e-08,36;UBERON:0002185,8.13e-08,5;UBERON:0000365,1.67e-07,5;UBERON:0001444,3.12e-07,49;UBERON:0011159,4.03e-07,5;UBERON:0003729,5.32e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9049518364521,17.7711492079168,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,6.19301990097322,66.7411997011973,0,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41130388857231,2.45471508531751,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3165268284108,17.9842805212191,62.5290208400344,7.31448716752384,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,1.34385702559088,2.55195175036296,3.67189943081678,4.94077695473735,30.2872316540517,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,12.4282304292966,1.66435439510497,4.83824469327489,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,9.39226087146143,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,3.90036147621913,0,0,0,0,0,0,0,0,0,1.98341898433174,3.65161127993702,0.765676274967505,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.94510662174599,16.0872546128589,8.71127878890581,0,0.86101074534246,6.73885902670502,30.1532504404939,1.83778720165568,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,1.84296421259539,0,0,0,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75518379342149,0,0,0,0,0,0,0,0,0,0,0,0,3.34616986268648,0.692552326534174,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.522355239482415,0.17472666824203,0,0,0,0,3.29762656060626,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2395543863163,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10243328470236,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67855409263333,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.471878893390961,4.21885776599862,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42370108905414,8.36520537760355,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0.258355639344024,0.124149428591716,0,0,0,3.9189014621453,4.79126621519393,0.26940821205835,0.573777643141411,0.332660356546013,0.244209805832924,0,0,0,0,0,4.47585796147312,0,0,0 | |||
|short_description=p@chr12:52913675..52913704,+ | |||
}} |
Revision as of 13:37, 11 January 2014
Short description: | p@chr12:52913675..52913704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913675..52913704, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 3.02e-13 | 99 |
lower respiratory tract epithelium | 9.07e-13 | 3 |
epithelium of bronchus | 9.07e-13 | 3 |
endoderm-derived structure | 1.22e-11 | 160 |
endoderm | 1.22e-11 | 160 |
presumptive endoderm | 1.22e-11 | 160 |
gingival epithelium | 1.30e-11 | 3 |
respiratory system | 8.63e-11 | 74 |
head | 4.38e-10 | 56 |
oral opening | 9.85e-10 | 22 |
mammary gland | 2.04e-09 | 4 |
mammary bud | 2.04e-09 | 4 |
mammary ridge | 2.04e-09 | 4 |
mammary placode | 2.04e-09 | 4 |
placenta | 4.24e-09 | 4 |
allantois | 4.24e-09 | 4 |
tracheobronchial tree | 5.21e-09 | 15 |
lower respiratory tract | 5.21e-09 | 15 |
mouth | 5.22e-09 | 29 |
stomodeum | 5.22e-09 | 29 |
anterior region of body | 8.18e-09 | 62 |
craniocervical region | 8.18e-09 | 62 |
jaw skeleton | 8.47e-09 | 4 |
splanchnocranium | 8.47e-09 | 4 |
orifice | 1.47e-08 | 36 |
bronchus | 8.13e-08 | 5 |
urothelium | 1.67e-07 | 5 |
subdivision of head | 3.12e-07 | 49 |
primary subdivision of cranial skeletal system | 4.03e-07 | 5 |
mouth mucosa | 5.32e-07 | 13 |