FFCP PHASE1:Hg19::chr12:70636841..70636852,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7878 | |||
|TSSclassifier=strong | |||
|UniProt=B2RDX7,Q9NZN8 | |||
|association_with_transcript=31bp_to_ENST00000418359,NM_001199302,uc009zro.2_5end | |||
|description=CAGE_peak_12_at_CNOT2_5end | |||
|id=chr12:70636841..70636852,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.80e-10!140;CL:0000988!4.78e-10!182;CL:0000037!1.51e-09!172;CL:0000566!1.51e-09!172;CL:0000081!9.43e-09!11;CL:0000094!3.36e-08!8;CL:0002032!1.10e-07!165;CL:0000837!1.10e-07!165;CL:0000766!5.11e-07!76;CL:0000080!8.46e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.87e-25;8!CL:0000623;1.80e-24;3!CL:0000081;3.42e-18;11!CL:0000771;2.06e-17;2!CL:0001014;6.44e-17;2!CL:0001016;6.44e-17;2!CL:0000226;1.35e-11;3!CL:0000775;1.35e-11;3!CL:0000842;1.35e-11;3!CL:0002032;2.54e-09;1!CL:0000167;2.54e-09;1!CL:0000164;2.54e-09;1!CL:0000502;2.54e-09;1!CL:0000172;2.54e-09;1!CL:0000557;2.54e-09;1!CL:0000173;2.54e-09;1!CL:0000453;2.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.03e-25,3;CL:0000825,3.03e-25,3;CL:0000094,5.17e-25,8;CL:0000081,3.57e-18,11;CL:0000771,2.44e-17,2;CL:0001014,3.67e-17,2;CL:0001016,3.67e-17,2;CL:0000775,9.32e-12,3;CL:0000226,2.31e-11,3;CL:0000842,2.31e-11,3;CL:0000738,2.05e-10,136;CL:0000167,1.32e-09,1;CL:0000164,1.32e-09,1;CL:0000502,1.32e-09,1;CL:0000172,1.32e-09,1;CL:0000173,1.32e-09,1;CL:0002351,1.32e-09,1;CL:0000037,3.41e-09,168;CL:0000988,1.39e-08,177;CL:0000453,2.14e-07,5;CL:0002032,3.52e-07,161;CL:0000837,3.52e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002351;2.54e-09;1!UBERON:0005425;2.54e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.41e-10;1!DOID:4549;9.41e-10;1!DOID:5861;9.41e-10;1!DOID:6496;9.41e-10;1!DOID:4430;2.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.68e-10,1;DOID:4549,8.68e-10,1;DOID:5861,8.68e-10,1;DOID:6496,8.68e-10,1;DOID:4430,1.32e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.54e-09;1!UBERON:0001785;2.54e-09;1!UBERON:0002464;2.54e-09;1!UBERON:0004904;2.54e-09;1!UBERON:0001021;2.54e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-09,1;UBERON:0001785,2.55e-09,1;UBERON:0002464,2.55e-09,1;UBERON:0004904,2.55e-09,1;UBERON:0001021,2.55e-09,1;UBERON:0003902,2.55e-09,1;UBERON:0005425,2.55e-09,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,1.15148819429164,0.309632246632152,0,0,0,0.232401601740905,0,0.293600439334847,0,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.768482119587302,0.236482229888585,0,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0,0.641858054152187,0,0,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,0,0.65156653411535,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,2.24203425192614,0,0.196709770113833,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,1.03056216018252,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,1.97065295158377,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,1.97030760201927,1.72502059887614,1.79680250791648,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.503464760927528,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,2.91245218081951,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,1.5748172408605,1.5476039091159,0,0,0.0788057072991982,0.0524545881349981,0.316801009558219,2.86859742932552,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.453692771289717,0,0.295710299979268,0.159296767163702,1.34940933649081,0,0,0,0,0,0,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0.697448552208751,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,1.24082554265728,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.22589216407792,0,0,0,0,0,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p12@CNOT2 | |||
}} |
Revision as of 14:37, 11 January 2014
Short description: | p12@CNOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CNOT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000418359, NM_001199302, uc009zro.2_5end |
EntrezGene: | CNOT2 |
HGNC: | 7878 |
UniProt: | B2RDX7Q9NZN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.03e-25 | 3 |
pro-NK cell | 3.03e-25 | 3 |
granulocyte | 5.17e-25 | 8 |
blood cell | 3.57e-18 | 11 |
eosinophil | 2.44e-17 | 2 |
CD1a-positive Langerhans cell | 3.67e-17 | 2 |
immature CD1a-positive Langerhans cell | 3.67e-17 | 2 |
neutrophil | 9.32e-12 | 3 |
single nucleate cell | 2.31e-11 | 3 |
mononuclear cell | 2.31e-11 | 3 |
leukocyte | 2.05e-10 | 136 |
peptide hormone secreting cell | 1.32e-09 | 1 |
enteroendocrine cell | 1.32e-09 | 1 |
type D enteroendocrine cell | 1.32e-09 | 1 |
somatostatin secreting cell | 1.32e-09 | 1 |
pancreatic D cell | 1.32e-09 | 1 |
progenitor cell of endocrine pancreas | 1.32e-09 | 1 |
hematopoietic stem cell | 3.41e-09 | 168 |
hematopoietic cell | 1.39e-08 | 177 |
Langerhans cell | 2.14e-07 | 5 |
hematopoietic oligopotent progenitor cell | 3.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.52e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-09 | 1 |
cranial nerve | 2.55e-09 | 1 |
nerve trunk | 2.55e-09 | 1 |
nerve connecting eye with brain | 2.55e-09 | 1 |
nerve | 2.55e-09 | 1 |
retinal neural layer | 2.55e-09 | 1 |
presumptive neural retina | 2.55e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.68e-10 | 1 |
extraosseous chondrosarcoma | 8.68e-10 | 1 |
myxoid chondrosarcoma | 8.68e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 8.68e-10 | 1 |
somatostatinoma | 1.32e-09 | 1 |