FFCP PHASE1:Hg19::chr12:81471791..81471806,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24723 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6R3 | |||
|association_with_transcript=-2bp_to_NM_024560,uc001szl.1_5end | |||
|description=CAGE_peak_3_at_ACSS3_5end | |||
|id=chr12:81471791..81471806,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.50e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-21!115;UBERON:0003075!3.22e-19!86;UBERON:0007284!3.22e-19!86;UBERON:0005743!5.83e-19!86;UBERON:0002346!6.57e-18!90;UBERON:0001049!1.44e-17!57;UBERON:0005068!1.44e-17!57;UBERON:0006241!1.44e-17!57;UBERON:0007135!1.44e-17!57;UBERON:0001017!6.87e-17!82;UBERON:0000073!9.90e-17!94;UBERON:0001016!9.90e-17!94;UBERON:0002616!1.09e-16!59;UBERON:0002780!1.40e-13!41;UBERON:0001890!1.40e-13!41;UBERON:0006240!1.40e-13!41;UBERON:0003056!2.48e-13!61;UBERON:0003080!6.15e-13!42;UBERON:0000033!1.01e-12!123;UBERON:0000153!1.71e-12!129;UBERON:0007811!1.71e-12!129;UBERON:0000955!1.90e-12!69;UBERON:0006238!1.90e-12!69;UBERON:0001893!1.98e-12!34;UBERON:0002791!3.67e-12!33;UBERON:0002020!3.97e-12!34;UBERON:0003528!3.97e-12!34;UBERON:0000475!1.32e-11!365;UBERON:0001869!2.04e-11!32;UBERON:0004121!1.55e-10!169;UBERON:0000956!2.16e-10!25;UBERON:0000203!2.16e-10!25;UBERON:0000924!4.88e-10!173;UBERON:0006601!4.88e-10!173;UBERON:0000468!7.17e-10!659;UBERON:0000481!1.43e-09!347;UBERON:0002619!1.48e-08!22;UBERON:0000119!1.14e-07!312;UBERON:0000483!1.24e-07!309;UBERON:0001950!1.38e-07!20 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.39e-11,82;UBERON:0007284,1.39e-11,82;UBERON:0002346,1.03e-10,86;UBERON:0001016,1.40e-09,89;UBERON:0001017,1.76e-09,81;UBERON:0007023,2.75e-09,114;UBERON:0010314,1.84e-08,132;UBERON:0010371,2.08e-08,104;UBERON:0003056,4.89e-08,61;UBERON:0004121,5.82e-08,171;UBERON:0000924,5.82e-08,171;UBERON:0006601,5.82e-08,171;UBERON:0001049,6.73e-08,56;UBERON:0005068,6.73e-08,56;UBERON:0006241,6.73e-08,56;UBERON:0007135,6.73e-08,56 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.738726348460727,0.816002764977012,1.25381888591235,2.57612388417951,1.77936752594749,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,2.9305793320861,2.88248216701333,0.966182642624386,1.24430121722827,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0.936480230490962,0,0.747243402759005,0,0,0,0.816616685019573,0.245668634623536,0.309977343527296,3.56400857184616,2.22540236350701,0,0,0.673344455816265,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0,0.206105058476878,1.03056216018252,0.37223371266318,0,0.0974370051611986,0.757301322732344,0.828449087780694,0.80823028409406,0.355009592516614,0.302256294682921,0,0,0,0,2.92736894711029,2.25300606146525,0.929551542956147,1.65857688024593,1.00928340350251,1.09493207722749,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0.857839051492628,0,0,0,0.185176890317059,0,0,0,2.20267769452646,0.821860859650752,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0,0,0.716243852959582,0,0,0,0,2.28685161800217,0,0,1.17261385734044,0.637938751653163,0,0,0,0.613457458595699,2.50085260529839,0.542530047399471,0,0,1.10391690523754,1.17141414992713,0.902838299183157,0,1.03473071292505,0,0.553107505625109,0.781952530212746,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0,0.512556597022804,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.574890092096664,0.519254429183621,0,0,0,0.276242966807689,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0,0,1.28225062558195,0.656029291399411,1.30151357865721,1.64865618636356,0.54941678891006,0.577566499444116,0,0,1.6068392984416,0.580024309752732,0.308097234229289,1.38153307253517,0.413509717453592,1.28904293841928,0.290033387828457,0.596586391912706,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0.929691098594572,0.94443704049192,0,0,0,0,0.18532421910392,0,1.116475108079,2.21465597303108,0.38126038784765,0.255897791311334,0,0,0,0.539617372749944,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.424216295861138,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.717056761020258,0,0.35667105148125,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.334330152832435,0,0,0,0,0.994147647766298,1.68803299692615,0.333926115068718,0,0,0.996239941255349,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0.649376687132959,0,1.30213880542617,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,1.20596438625408,0,0.774054819518572,0,2.63262476584767,0,0,2.38545801361771,0,0.23056390438806,0,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.808813595768125,0,0.468528891450678,0,0,0,2.36750641709634,2.41981432097328,0.30607276163049,2.65383634439649,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,3.66926003308263,0.343972064943233,0,0,0,0.581934098930517,0,1.58186518546373,0,0.596143835108969,0.50648636764703,0.782205530939212,1.04206466326994,1.92107695265417,0,0,1.83258553865465,0.514784993585894,0,0.621262677827163,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,1.67569440763353,1.83328339209347,0,0.399358000997982,0.429226048136571,0.669514372325618,3.22480667936286,0,0,0.393915911536118,0.576911008668165,0.741438982396034,0.295282444544246,0,0.795229689809303,1.22583065500418,1.44677833618517,0.962776056180637,0.415440338029185,0,0,0.668245123238271,0,2.99461687736953,1.57363764404994,0.316801009558219,1.43429871466276,0,2.1440859791201,0.662091970365432,0,1.62899880526114,0,1.63293680054705,0,0,0,0,1.46552233678082,0,0.258565912723101,0.66116300871345,0.171086837884329,0.704815022316672,0.961086713109252,1.41483874589699,0.414239055347196,0,0,0,0,1.08803560673895,2.2562090462043,1.53172788381731,3.93447156851765,5.18278517625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| |||
|short_description=p3@ACSS3 | |||
}} |
Revision as of 14:56, 11 January 2014
Short description: | p3@ACSS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACSS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_024560, uc001szl.1_5end |
EntrezGene: | ACSS3 |
HGNC: | 24723 |
UniProt: | Q9H6R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neural plate | 1.39e-11 | 82 |
presumptive neural plate | 1.39e-11 | 82 |
neurectoderm | 1.03e-10 | 86 |
nervous system | 1.40e-09 | 89 |
central nervous system | 1.76e-09 | 81 |
adult organism | 2.75e-09 | 114 |
structure with developmental contribution from neural crest | 1.84e-08 | 132 |
ecto-epithelium | 2.08e-08 | 104 |
pre-chordal neural plate | 4.89e-08 | 61 |
ectoderm-derived structure | 5.82e-08 | 171 |
ectoderm | 5.82e-08 | 171 |
presumptive ectoderm | 5.82e-08 | 171 |
neural tube | 6.73e-08 | 56 |
neural rod | 6.73e-08 | 56 |
future spinal cord | 6.73e-08 | 56 |
neural keel | 6.73e-08 | 56 |