FFCP PHASE1:Hg19::chr12:124857024..124857048,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:124857024..124857048,- | |||
|id=chr12:124857024..124857048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.25e-14;32!CL:0002595;2.83e-13;5!CL:0000346;1.89e-08;3!CL:1000428;1.89e-08;3!CL:0002559;1.90e-08;5!CL:0000192;1.28e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.03e-14,32;CL:0002595,6.74e-13,5;CL:0000192,8.93e-10,43;CL:0000514,8.93e-10,43;CL:0000346,4.59e-09,3;CL:1000428,4.59e-09,3;CL:0002559,6.08e-09,5;CL:0000222,2.21e-08,121;CL:0000187,6.96e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!8.58e-09!625;UBERON:0000480!1.30e-08!626;UBERON:0001637!1.44e-08!42;UBERON:0003509!1.44e-08!42;UBERON:0004572!1.44e-08!42;UBERON:0000468!2.54e-08!659;UBERON:0004573!2.04e-07!33;UBERON:0004571!2.04e-07!33;UBERON:0000483!2.65e-07!309;UBERON:0000119!2.90e-07!312;UBERON:0003914!6.51e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.73e-17;7!UBERON:0004573;3.27e-17;33!UBERON:0004571;3.27e-17;33!UBERON:0001637;1.09e-13;42!UBERON:0003509;1.09e-13;42!UBERON:0004572;1.09e-13;42!UBERON:0003834;2.83e-13;5!UBERON:0001533;2.83e-13;5!UBERON:0000412;1.89e-08;3!UBERON:0001992;1.89e-08;3!UBERON:0002073;1.90e-08;5!UBERON:0007500;5.96e-08;56!UBERON:0001981;5.96e-08;56!UBERON:0004537;5.96e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.35e-19,42;UBERON:0003509,1.35e-19,42;UBERON:0004572,1.35e-19,42;UBERON:0004573,1.25e-18,33;UBERON:0004571,1.25e-18,33;UBERON:0003513,2.52e-17,7;UBERON:0007500,1.93e-15,59;UBERON:0001981,1.93e-15,59;UBERON:0004537,1.93e-15,59;UBERON:0006965,1.93e-15,59;UBERON:0003834,6.74e-13,5;UBERON:0001533,6.74e-13,5;UBERON:0004872,8.68e-13,83;UBERON:0000055,1.28e-12,68;UBERON:0003081,1.74e-12,203;UBERON:0007503,2.11e-12,78;UBERON:0002049,2.45e-11,78;UBERON:0007798,2.45e-11,78;UBERON:0003914,1.71e-10,117;UBERON:0002329,2.32e-09,71;UBERON:0003059,2.32e-09,71;UBERON:0007282,2.32e-09,71;UBERON:0004290,2.32e-09,71;UBERON:0009618,2.32e-09,71;UBERON:0000926,3.29e-09,315;UBERON:0004120,3.29e-09,315;UBERON:0006603,3.29e-09,315;UBERON:0003077,3.67e-09,72;UBERON:0007285,3.67e-09,72;UBERON:0000412,4.59e-09,3;UBERON:0001992,4.59e-09,3;UBERON:0007524,5.71e-09,73;UBERON:0002073,6.08e-09,5;UBERON:0005086,6.08e-09,5;UBERON:0004535,3.91e-08,109;UBERON:0005256,5.31e-08,122;UBERON:0001009,9.31e-08,112;UBERON:0001134,1.12e-07,62;UBERON:0002036,1.12e-07,62;UBERON:0003082,1.12e-07,62;UBERON:0002385,2.57e-07,64;UBERON:0001015,2.57e-07,64;UBERON:0000383,2.57e-07,64;UBERON:0000486,2.59e-07,83 | |||
|phase1_expression=0,1.49870366723688,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,1.39560233594486,0.873765488520689,1.05506791291381,0,0,0,1.80808358407193,1.46062018077475,0,0.861847406537515,0.408001382488506,0.626909442956176,0,0.547497700291537,0.251085279189606,0.458480434487708,0.164201178899891,0.314843125254717,0,0,0,0,0.30120591877825,1.10926203050036,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0.515151135268373,1.16318591023652,1.88937971844405,0.727752183563449,1.39457422143411,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.344745680736619,1.29096936716765,0,2.25890807451126,0,0.224723484445085,2.75475503133812,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0.56738522469114,1.24564449799115,1.25624332628372,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0,0,0.670700859703636,0,0,0,0.724232594804119,0,1.45990461090791,0.472674085820339,0.665188192387692,1.05401742831751,0.523916301990851,0,0.370784442784429,0,0.696518949197069,0.664789802594326,0,0,0,0.596287222100115,1.72046919021225,0.694281003215189,0,1.67799774483962,0.275118041940067,2.29894463190492,0.516833518338658,0,0,0,0,0.24406205754817,0.735326160691737,2.43042584364528,0,0,0.337834441449967,0,0,0.916008719652036,0,0,0.436094052142534,0,0.633152558322899,0,1.43418310374407,0.709336764396714,0.560677600142307,0,0.98667019366864,0.311211035399766,0.404132016209064,0.653847612453835,0,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.368502951935304,0.826606249406124,1.18800285728205,0.494533858557114,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0.226864366320042,2.15267562826634,0,0,0.900273288253207,0.618315175430633,1.28820270022815,0.37223371266318,0.675105328965065,0.389748020644795,1.7670364197088,0.368199594569197,0.323292113637624,2.13005755509969,0.906768884048762,1.52604533079439,0.193260853163297,0.272746120590835,0.860413786167011,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0.504641701751257,0,1.56449532329816,1.92972281457866,2.76269842704961,1.39310378409594,0,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.671928512795438,0,0.179117045405697,0,0.766765358330422,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.66004457238855,0.517086863031111,0,0,0.531876233169741,0,0.257207374262142,0,1.0656887160644,0.428933980974443,2.17048642156577,0,0.325736184293735,0,0,0.602878754119172,0,0.699810938274399,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.591092280605782,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,1.07057393278297,0.473107245101804,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,1.56640925970192,0.343143423810856,0.413536052245775,0.215714200818617,0,0,1.66435439510497,0.604780586659361,0.248107807818777,0.306923946576125,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.308419387605311,1.24293207719189,0.328508624055237,0.519254429183621,0.813472649219715,0.604297247958111,0.200506470303285,0.184161977871793,0.459257792658427,0.364182336013434,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,1.13733384070897,0.850468526382578,0.431831832204279,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.769350375349168,1.96808787419823,0.650756789328606,0.206082023295445,0.366277859273374,0.165018999841176,1.14853107599234,0.650060246036521,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.534192213880424,0.165284915360978,0.576570202095319,0.127612712494584,0.2023155617111,1.39453664789186,1.25924938732256,0,1.54016790088044,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0,0,2.22742273548156,1.56989728039846,0.179872457583315,0,0.235624804691373,1.2130948894399,0,2.52755073743389,0.48763373908959,1.21856744815642,3.16950440270266,0.409499734223957,0.282810863907425,0,1.10273068709225,3.98063385144732,1.315352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| |||
|short_description=p@chr12:124857024..124857048,- | |||
}} |
Revision as of 16:36, 11 January 2014
Short description: | p@chr12:124857024..124857048, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124857024..124857048, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.03e-14 | 32 |
smooth muscle cell of the subclavian artery | 6.74e-13 | 5 |
smooth muscle cell | 8.93e-10 | 43 |
smooth muscle myoblast | 8.93e-10 | 43 |
hair follicle dermal papilla cell | 4.59e-09 | 3 |
stem cell of epidermis | 4.59e-09 | 3 |
hair follicle cell | 6.08e-09 | 5 |
mesodermal cell | 2.21e-08 | 121 |
muscle cell | 6.96e-07 | 55 |