FFCP PHASE1:Hg19::chr15:101420028..101420044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=409 | |||
|TSSclassifier=strong | |||
|UniProt=B4E0M6 | |||
|association_with_transcript=0bp_to_ENST00000415812,ENST00000557963_5end | |||
|coexpression_cluster_id=C908 | |||
|description=CAGE_peak_1_at_ALDH1A3_5end | |||
|id=chr15:101420028..101420044,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.50e-21!246;CL:0002321!3.48e-21!248;CL:0000222!2.23e-16!119;CL:0000066!2.19e-15!254;CL:0000055!1.28e-13!180;CL:0000076!2.04e-12!62;CL:0000680!2.65e-11!57;CL:0000056!2.65e-11!57;CL:0000355!2.65e-11!57;CL:0000187!4.77e-11!54;CL:0000359!6.26e-11!32;CL:0000192!8.44e-10!42;CL:0000514!8.44e-10!42;CL:0000183!1.32e-09!59;CL:0000393!1.54e-09!60;CL:0000211!1.54e-09!60;CL:0000077!2.26e-09!19;CL:0002368!3.83e-07!13;CL:0002076!7.20e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.67e-10;32!CL:0000077;1.60e-09;19!CL:0000192;2.04e-07;43!CL:0002368;2.96e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.38e-20,250;CL:0000222,4.18e-16,121;CL:0000066,6.54e-14,253;CL:0000076,3.75e-12,63;CL:0000680,1.88e-11,58;CL:0000056,1.88e-11,58;CL:0000355,1.88e-11,58;CL:0000187,3.46e-11,55;CL:0000359,4.15e-11,32;CL:0000192,6.69e-10,43;CL:0000514,6.69e-10,43;CL:0000077,1.60e-09,19;CL:0000393,1.62e-09,61;CL:0000211,1.62e-09,61;CL:0002076,2.68e-07,42;CL:0002368,2.99e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.66e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.87e-23!365;UBERON:0000481!5.79e-23!347;UBERON:0000119!3.73e-19!312;UBERON:0000483!4.55e-19!309;UBERON:0003104!1.30e-17!238;UBERON:0009142!1.30e-17!238;UBERON:0004111!9.37e-17!241;UBERON:0000468!1.37e-16!659;UBERON:0002100!3.53e-16!216;UBERON:0000477!4.91e-16!286;UBERON:0000467!5.26e-16!625;UBERON:0000480!1.07e-15!626;UBERON:0000486!1.51e-14!82;UBERON:0005256!5.05e-14!143;UBERON:0001637!5.94e-14!42;UBERON:0003509!5.94e-14!42;UBERON:0004572!5.94e-14!42;UBERON:0003914!2.05e-13!118;UBERON:0001048!3.79e-13!168;UBERON:0000922!1.42e-12!612;UBERON:0004872!2.55e-12!84;UBERON:0002050!5.10e-12!605;UBERON:0005423!5.10e-12!605;UBERON:0000923!9.48e-12!604;UBERON:0005291!9.48e-12!604;UBERON:0006598!9.48e-12!604;UBERON:0002532!9.48e-12!604;UBERON:0002385!2.46e-11!63;UBERON:0001015!2.46e-11!63;UBERON:0000383!2.46e-11!63;UBERON:0000490!2.65e-11!138;UBERON:0003102!3.58e-11!95;UBERON:0004119!3.73e-11!169;UBERON:0000925!3.73e-11!169;UBERON:0006595!3.73e-11!169;UBERON:0001134!3.86e-11!61;UBERON:0002036!3.86e-11!61;UBERON:0003082!3.86e-11!61;UBERON:0004573!6.03e-11!33;UBERON:0004571!6.03e-11!33;UBERON:0000464!7.79e-11!104;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004290!1.31e-10!70;UBERON:0000055!3.04e-10!69;UBERON:0000914!3.31e-10!83;UBERON:0002329!3.31e-10!83;UBERON:0003077!3.31e-10!83;UBERON:0003059!3.31e-10!83;UBERON:0007282!3.31e-10!83;UBERON:0009618!3.31e-10!83;UBERON:0007285!3.31e-10!83;UBERON:0002049!7.17e-10!79;UBERON:0007798!7.17e-10!79;UBERON:0000025!7.34e-10!194;UBERON:0000466!2.93e-09!126;UBERON:0001007!3.34e-09!155;UBERON:0001555!3.34e-09!155;UBERON:0007026!3.34e-09!155;UBERON:0002553!5.38e-09!70;UBERON:0003886!1.06e-08!63;UBERON:0004458!2.19e-08!49;UBERON:0002323!1.15e-07!46;UBERON:0000161!1.71e-07!35;UBERON:0004921!3.40e-07!129;UBERON:0004185!3.40e-07!129;UBERON:0003103!4.12e-07!69;UBERON:0005156!5.53e-07!59;UBERON:0000990!5.53e-07!59;UBERON:0000064!6.30e-07!219;UBERON:0001004!7.42e-07!72;UBERON:0000062!9.11e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.31e-10;42!UBERON:0003509;5.31e-10;42!UBERON:0004572;5.31e-10;42!UBERON:0004573;5.41e-10;33!UBERON:0004571;5.41e-10;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.91e-18,309;UBERON:0000483,7.21e-18,306;UBERON:0004111,5.83e-16,240;UBERON:0002100,1.60e-15,199;UBERON:0000486,9.02e-15,83;UBERON:0001637,3.45e-14,42;UBERON:0003509,3.45e-14,42;UBERON:0004572,3.45e-14,42;UBERON:0003914,1.30e-13,117;UBERON:0005256,1.32e-12,122;UBERON:0004872,2.17e-12,83;UBERON:0003102,5.85e-12,99;UBERON:0000490,1.41e-11,148;UBERON:0001048,1.46e-11,160;UBERON:0002385,1.70e-11,64;UBERON:0001015,1.70e-11,64;UBERON:0000383,1.70e-11,64;UBERON:0001134,2.70e-11,62;UBERON:0002036,2.70e-11,62;UBERON:0003082,2.70e-11,62;UBERON:0004573,3.99e-11,33;UBERON:0004571,3.99e-11,33;UBERON:0003104,4.22e-11,160;UBERON:0009142,4.22e-11,160;UBERON:0002329,9.01e-11,71;UBERON:0003059,9.01e-11,71;UBERON:0007282,9.01e-11,71;UBERON:0004290,9.01e-11,71;UBERON:0009618,9.01e-11,71;UBERON:0007500,1.06e-10,59;UBERON:0001981,1.06e-10,59;UBERON:0004537,1.06e-10,59;UBERON:0006965,1.06e-10,59;UBERON:0003077,1.36e-10,72;UBERON:0007285,1.36e-10,72;UBERON:0007524,1.61e-10,73;UBERON:0000922,1.96e-10,592;UBERON:0000055,2.80e-10,68;UBERON:0004119,4.63e-10,160;UBERON:0000925,4.63e-10,160;UBERON:0006595,4.63e-10,160;UBERON:0002049,1.41e-09,78;UBERON:0007798,1.41e-09,78;UBERON:0007503,1.54e-09,78;UBERON:0005423,3.90e-09,581;UBERON:0000025,3.90e-09,192;UBERON:0002050,1.47e-08,564;UBERON:0004458,2.26e-08,49;UBERON:0001007,3.96e-08,145;UBERON:0001555,3.96e-08,145;UBERON:0007026,3.96e-08,145;UBERON:0000923,1.15e-07,560;UBERON:0010316,1.15e-07,560;UBERON:0005291,1.15e-07,560;UBERON:0006598,1.15e-07,560;UBERON:0010317,1.15e-07,560;UBERON:0002532,1.15e-07,560;UBERON:0002323,1.21e-07,46;UBERON:0000161,1.73e-07,36;UBERON:0005156,4.63e-07,59;UBERON:0000990,4.63e-07,59;UBERON:0002553,4.92e-07,61;UBERON:0001004,9.45e-07,74 | |||
|phase1_expression=11.4457378940451,29.3317717730647,95.0032683606846,54.0395811106904,216.776130797235,13.0850778615055,7.59899634504932,222.365395446244,57.4608382039645,18.9215131106162,14.653824527421,6.55324116390517,6.06664049925443,1.60896258848061,2.65117900582333,99.5041216748627,115.11465485258,95.6706218407459,127.838393283113,84.0916826664461,33.048111981569,32.5992910337211,2.86235987131057,6.98059567871709,0.627713197974014,0,0,0,0,0,0.928896739896456,401.787075097291,171.386167784824,210.020277774735,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,173.102875082913,37.5592481434036,7.28816602508123,14.8190052477672,9.02408239144601,5.06962816362883,1.5905718941022,2.43317435151318,3.40325341790644,0.886917589850256,5.18225235589444,11.0022423418079,139.889390704336,65.9996308156284,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,3.57772333260069,14.6239881168041,4.51282652089873,25.4388573865804,53.695927834868,23.6601516068458,3.9709043641994,9.56142008926517,7.82685777910763,9.37217715741077,9.66790361061953,3.80136052859256,10.4946684745713,4.77962004449629,14.5825550618717,2.76829157680647,2.02076435363553,0.788280363383256,1.53316637465883,1.89853131913626,3.29763139074733,0,0,259.475961024808,0,44.7005706175967,121.021991263282,22.3732564184075,74.1256918794566,57.7497928146576,30.9572087616144,51.5535176191864,10.2699641681923,47.1487352243908,27.4615997230611,23.1576864296745,12.67587033856,19.6830002740389,4.05808099879417,6.84566185853339,3.73621701379503,2.93586246609412,4.69431538667581,3.93262258766296,1.63323337003915,3.0708579327942,2.16984140469107,14.2560342873846,7.17074094907815,41.8674226491492,21.5585442544872,3.70339450698946,4.37914819551875,2.49357703935765,3.07284334616587,5.82326812018137,3.60571341375832,57.8504134116107,1.25572744982203,39.0810021537978,17.1664839939245,13.8041904198825,20.8166109061647,21.1265242837416,19.5422699148169,12.1518959213712,7.89239741805709,9.34004964703224,15.5564328705486,58.5158725684099,3.90510551768276,2.61955455391865,1.18692414617341,272.304542107085,138.009537018962,274.471997787277,3.17131635936948,3.71083351300159,3.83440011469411,6.53064646596834,4.28945446488568,2.55484151353081,51.6283456688393,35.3782516006087,1.38134921352481,4.17931135228781,1.44375896333917,13.0137480043828,17.3642230780445,11.3275184045237,12.4632189187605,12.6370077573596,11.8635309555548,7.28089064064888,10.203516186518,11.9271618653381,5.16708818237254,36.4628611888959,160.925438430577,13.2307840246988,0,0,27.1763357073446,0,3.68965315629341,0.171567810298526,147.72388416001,53.9528415636574,17.693099144447,25.5544108637542,6.84197441151682,25.9983696319895,14.4331342025273,6.83989389352953,1.52631302506568,6.0633908059651,3.24089858803628,7.61016608938393,0.790204397959275,1.71697232418975,0,0,0,79.6737588887604,40.8196571523229,241.726540798269,19.5237579492209,111.603432389361,278.719207753109,0,0,0.414656231081544,0.144119953416961,0.12624243342638,2.15892840593375,10.6956759156318,4.68869788840188,25.6608669034058,12.5449541098055,0.901029173531752,3.42991719156694,10.2039286754278,3.92364061949952,6.6004457238855,118.412891634124,67.9547247118577,14.370146793452,1.86156681609409,0,2.05765899409714,4.25547396069835,3.72991050622539,11.1522835053355,98.2145105758512,1.64648067356154,12.0522388188682,15.637245744672,5.543663110534,2349.71994417947,2284.28919499137,2335.76896597758,0,0,0,7.18874566474748,8.04033550838797,58.4811310666945,41.1178910935925,9.24643451476725,10.9227187576336,0,0,0,0,0.508189248444927,0,3.09315525111078,0.502548796003046,1.91381625495949,0,0,0,2.82190430954022,1.50051156317903,8.4092157346918,0.415941723061614,3.03329280955175,2.52323864054295,1.52283839490527,0.601892199455438,0,8.27784570340039,1.32845119707087,1.47495334833363,0.695068915744663,1.56640925970192,2.05886054286514,0,0,0,1.5156378572313,3.32870879020994,5.44302527993425,2.48107807818777,1.68808170616869,1.96462066103151,10.8918276867346,25.0736552042685,12.2248980069142,19.2943486378488,24.9819703960302,70.8471283999377,95.8423910681153,71.1378567981561,81.1148441650516,1.93375119346596,536.55531453159,240.147219144818,67.3960810726242,58.9975384341763,71.3316817379267,65.4239438715747,65.7710978871702,6.27479815341484,84.7607502988912,66.1808713158331,1.13733384070897,0.680374821106063,5.61381381865562,3.08454505380579,1.89662506280697,4.51520796469368,49.4459969707374,45.7091804910798,25.7455967930505,0,0,65.907682154912,334.5749386137,166.919116462787,7.10982980369284,2.56394501491362,2.64030399745882,118.298700827212,116.360784040537,231.38485897559,49.0120541741058,24.0315842698845,17.0389078946004,6.753992051742,8.1639386099888,3.0453505721988,23.5225491668438,8.6361074577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| |||
|short_description=p1@ALDH1A3 | |||
}} |
Revision as of 01:33, 12 January 2014
Short description: | p1@ALDH1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH1A3_5end |
Coexpression cluster: | C908_Mesothelial_mesenchymal_squamous_mesothelioma_mucinous_oral_Smooth |
Association with transcript: | 0bp_to_ENST00000415812, ENST00000557963_5end |
EntrezGene: | ALDH1A3 |
HGNC: | 409 |
UniProt: | B4E0M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.38e-20 | 250 |
mesodermal cell | 4.18e-16 | 121 |
epithelial cell | 6.54e-14 | 253 |
squamous epithelial cell | 3.75e-12 | 63 |
muscle precursor cell | 1.88e-11 | 58 |
myoblast | 1.88e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.88e-11 | 58 |
muscle cell | 3.46e-11 | 55 |
vascular associated smooth muscle cell | 4.15e-11 | 32 |
smooth muscle cell | 6.69e-10 | 43 |
smooth muscle myoblast | 6.69e-10 | 43 |
mesothelial cell | 1.60e-09 | 19 |
electrically responsive cell | 1.62e-09 | 61 |
electrically active cell | 1.62e-09 | 61 |
endo-epithelial cell | 2.68e-07 | 42 |
respiratory epithelial cell | 2.99e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.18e-07 | 14 |