FFCP PHASE1:Hg19::chr17:27038292..27038330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28600 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9R8 | |||
|association_with_transcript=-188bp_to_ENST00000439862,uc002hcb.3,uc010crv.2_5end | |||
|description=CAGE_peak_1_at_PROCA1_5end | |||
|id=chr17:27038292..27038330,- | |||
|ontology_enrichment_celltype=CL:0002319!1.96e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.52e-09;25!CL:0000095;3.08e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.72e-10,25;CL:0000095,1.53e-07,17;CL:0000123,1.53e-07,17;CL:0000133,9.25e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.46e-20!235;DOID:14566!5.33e-20!239;DOID:0050687!7.78e-17!143;DOID:305!7.85e-12!106;DOID:0050686!2.84e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.85e-07;14!DOID:3095;4.90e-07;22!DOID:2994;4.90e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.26e-21,235;DOID:14566,2.12e-20,239;DOID:0050687,4.70e-18,143;DOID:305,9.85e-13,106;DOID:0050686,1.61e-08,137;DOID:3095,3.20e-07,22;DOID:2994,3.20e-07,22;DOID:3119,9.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-10!94;UBERON:0001016!3.50e-10!94;UBERON:0005743!8.31e-10!86;UBERON:0001017!2.15e-09!82;UBERON:0002346!8.30e-09!90;UBERON:0001049!2.40e-08!57;UBERON:0005068!2.40e-08!57;UBERON:0006241!2.40e-08!57;UBERON:0007135!2.40e-08!57;UBERON:0003075!5.43e-08!86;UBERON:0007284!5.43e-08!86;UBERON:0000955!1.12e-07!69;UBERON:0006238!1.12e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.51e-11,89;UBERON:0001017,3.58e-10,81;UBERON:0002346,6.79e-10,86;UBERON:0001049,4.34e-09,56;UBERON:0005068,4.34e-09,56;UBERON:0006241,4.34e-09,56;UBERON:0007135,4.34e-09,56;UBERON:0003075,5.87e-09,82;UBERON:0007284,5.87e-09,82;UBERON:0000073,1.38e-08,53;UBERON:0002616,1.38e-08,53;UBERON:0000955,4.44e-08,68;UBERON:0006238,4.44e-08,68;UBERON:0011216,1.13e-07,223;UBERON:0010371,3.16e-07,104;UBERON:0004121,4.09e-07,171;UBERON:0000924,4.09e-07,171;UBERON:0006601,4.09e-07,171 | |||
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| |||
|short_description=p1@PROCA1 | |||
}} |
Revision as of 14:25, 20 January 2014
Short description: | p1@PROCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PROCA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -188bp_to_ENST00000439862, uc002hcb.3, uc010crv.2_5end |
EntrezGene: | PROCA1 |
HGNC: | 28600 |
UniProt: | G5E9R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.72e-10 | 25 |
neuron associated cell | 1.53e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.53e-07 | 17 |
neurectodermal cell | 9.25e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.51e-11 | 89 |
central nervous system | 3.58e-10 | 81 |
neurectoderm | 6.79e-10 | 86 |
neural tube | 4.34e-09 | 56 |
neural rod | 4.34e-09 | 56 |
future spinal cord | 4.34e-09 | 56 |
neural keel | 4.34e-09 | 56 |
neural plate | 5.87e-09 | 82 |
presumptive neural plate | 5.87e-09 | 82 |
regional part of nervous system | 1.38e-08 | 53 |
regional part of brain | 1.38e-08 | 53 |
brain | 4.44e-08 | 68 |
future brain | 4.44e-08 | 68 |
organ system subdivision | 1.13e-07 | 223 |
ecto-epithelium | 3.16e-07 | 104 |
ectoderm-derived structure | 4.09e-07 | 171 |
ectoderm | 4.09e-07 | 171 |
presumptive ectoderm | 4.09e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.26e-21 | 235 |
disease of cellular proliferation | 2.12e-20 | 239 |
cell type cancer | 4.70e-18 | 143 |
carcinoma | 9.85e-13 | 106 |
organ system cancer | 1.61e-08 | 137 |
germ cell and embryonal cancer | 3.20e-07 | 22 |
germ cell cancer | 3.20e-07 | 22 |
gastrointestinal system cancer | 9.19e-07 | 14 |