FFCP PHASE1:Hg19::chr19:45504688..45504782,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5971 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9956 | |||
|TSSclassifier=strong | |||
|UniProt=Q01201,D6R992,D6RIV7 | |||
|association_with_transcript=0bp_to_ENST00000221452,ENST00000505236,ENST00000509480,ENST00000540120,NM_006509,uc002paj.1_5end | |||
|coexpression_cluster_id=C2054 | |||
|description=CAGE_peak_1_at_RELB_5end | |||
|id=chr19:45504688..45504782,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.46e-34!140;CL:0002087!1.34e-25!119;CL:0002031!1.58e-24!124;CL:0000766!2.59e-23!76;CL:0002057!2.86e-23!42;CL:0000988!1.05e-20!182;CL:0000557!2.77e-20!71;CL:0000860!8.39e-20!45;CL:0000037!8.67e-20!172;CL:0000566!8.67e-20!172;CL:0002009!2.21e-19!65;CL:0002194!3.04e-18!63;CL:0000576!3.04e-18!63;CL:0000040!3.04e-18!63;CL:0000559!3.04e-18!63;CL:0002032!4.94e-18!165;CL:0000837!4.94e-18!165;CL:0000839!1.36e-17!70;CL:0002371!4.97e-13!591;CL:0000144!3.38e-12!625;CL:0000063!1.34e-11!578;CL:0000012!1.42e-11!682;CL:0000763!3.42e-11!112;CL:0000049!3.42e-11!112;CL:0000548!6.04e-11!679;CL:0000004!6.04e-11!679;CL:0000255!6.04e-11!679;CL:0000003!3.17e-10!722;CL:0000048!1.66e-09!430;CL:0000034!2.38e-09!444;CL:0000723!2.44e-09!436;CL:0002320!1.61e-08!365;CL:0000134!3.52e-08!358;CL:0000542!4.01e-07!53;CL:0000051!4.01e-07!53;CL:0000838!7.71e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.12e-18;33!CL:0002057;7.12e-18;33!CL:0000473;2.49e-16;39!CL:0000234;2.49e-16;39!CL:0000576;2.75e-12;48!CL:0000766;1.66e-11;69!CL:0002087;2.00e-08;104!CL:0000738;3.65e-08;136!CL:0000945;9.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.72e-36,136;CL:0002087,1.27e-27,115;CL:0002031,1.97e-26,120;CL:0000766,8.84e-26,72;CL:0000473,6.71e-25,48;CL:0000234,6.71e-25,48;CL:0000860,2.58e-23,42;CL:0002057,2.58e-23,42;CL:0000557,1.29e-22,67;CL:0000988,3.56e-22,177;CL:0002009,8.50e-22,61;CL:0000037,3.47e-21,168;CL:0002194,1.33e-20,59;CL:0000576,1.33e-20,59;CL:0000040,1.33e-20,59;CL:0000559,1.33e-20,59;CL:0000839,1.05e-19,66;CL:0002032,2.23e-19,161;CL:0000837,2.23e-19,161;CL:0000763,2.44e-12,108;CL:0000049,2.44e-12,108;CL:0000048,4.03e-10,427;CL:0000034,5.62e-10,441;CL:0000723,5.73e-10,433;CL:0002320,4.51e-09,361;CL:0000134,1.01e-08,354;CL:0000542,3.17e-07,53;CL:0000051,3.17e-07,53;CL:0000838,6.14e-07,52;CL:0000945,8.92e-07,24;CL:0000826,8.92e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.03e-26!112;UBERON:0002390!8.27e-24!102;UBERON:0003061!8.27e-24!102;UBERON:0003081!1.61e-22!216;UBERON:0002371!8.12e-18!80;UBERON:0002405!1.58e-17!115;UBERON:0001474!1.39e-15!86;UBERON:0000926!1.98e-13!448;UBERON:0004120!1.98e-13!448;UBERON:0006603!1.98e-13!448;UBERON:0004765!4.35e-13!101;UBERON:0001434!4.35e-13!101;UBERON:0002204!1.86e-11!167;UBERON:0002384!1.28e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-27,108;UBERON:0002390,9.97e-26,98;UBERON:0003061,9.97e-26,98;UBERON:0002405,7.19e-23,93;UBERON:0003081,2.83e-21,203;UBERON:0002371,1.16e-19,76;UBERON:0004765,1.57e-17,90;UBERON:0001474,2.95e-17,82;UBERON:0001434,9.72e-15,100;UBERON:0000926,4.13e-14,315;UBERON:0004120,4.13e-14,315;UBERON:0006603,4.13e-14,315;UBERON:0002204,1.05e-12,167;UBERON:0002384,3.95e-08,371 | |||
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| |||
|short_description=p1@RELB | |||
}} |
Revision as of 23:50, 20 January 2014
Short description: | p1@RELB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RELB_5end |
Coexpression cluster: | C2054_Eosinophils_Dendritic_Neutrophils_CD19_CD14_Basophils_CD34 |
Association with transcript: | 0bp_to_ENST00000221452, ENST00000505236, ENST00000509480, ENST00000540120, NM_006509, uc002paj.1_5end |
EntrezGene: | RELB |
HGNC: | 9956 |
UniProt: | Q01201D6R992D6RIV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-27 | 108 |
hematopoietic system | 9.97e-26 | 98 |
blood island | 9.97e-26 | 98 |
immune system | 7.19e-23 | 93 |
lateral plate mesoderm | 2.83e-21 | 203 |
bone marrow | 1.16e-19 | 76 |
skeletal element | 1.57e-17 | 90 |
bone element | 2.95e-17 | 82 |
skeletal system | 9.72e-15 | 100 |
mesoderm | 4.13e-14 | 315 |
mesoderm-derived structure | 4.13e-14 | 315 |
presumptive mesoderm | 4.13e-14 | 315 |
musculoskeletal system | 1.05e-12 | 167 |
connective tissue | 3.95e-08 | 371 |