FFCP PHASE1:Hg19::chr19:50432104..50432126,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=790 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D1 | |||
|association_with_transcript=130bp_to_ENST00000423777,uc010enq.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_ATF5_5end | |||
|id=chr19:50432104..50432126,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.64e-54!63;CL:0000576!3.64e-54!63;CL:0000040!3.64e-54!63;CL:0000559!3.64e-54!63;CL:0002009!5.15e-54!65;CL:0000557!1.70e-51!71;CL:0000766!4.00e-51!76;CL:0000839!1.65e-50!70;CL:0002057!5.64e-48!42;CL:0000860!9.06e-46!45;CL:0000763!3.99e-42!112;CL:0000049!3.99e-42!112;CL:0000738!2.86e-30!140;CL:0000037!4.89e-26!172;CL:0000566!4.89e-26!172;CL:0002087!3.70e-25!119;CL:0002031!2.57e-24!124;CL:0002032!4.14e-24!165;CL:0000837!4.14e-24!165;CL:0000988!2.63e-23!182;CL:0000451!1.55e-11!10;CL:0000990!2.20e-09!8;CL:0000134!4.86e-07!358;CL:0002393!8.03e-07!9;CL:0002397!8.03e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-109;33!CL:0002057;2.27e-109;33!CL:0000473;2.42e-105;39!CL:0000234;2.42e-105;39!CL:0000576;8.15e-59;48!CL:0000766;4.33e-39;69!CL:0000763;1.55e-19;100!CL:0000235;8.66e-18;6!CL:0000738;3.59e-14;136!CL:0002087;1.24e-13;104!CL:0000988;1.89e-08;177!CL:0000990;8.74e-08;8!CL:0000840;5.42e-07;5!CL:0002393;6.29e-07;6!CL:0002397;6.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.90e-130,48;CL:0000234,9.90e-130,48;CL:0002194,1.45e-119,59;CL:0000576,1.45e-119,59;CL:0000040,1.45e-119,59;CL:0000559,1.45e-119,59;CL:0002009,1.88e-115,61;CL:0000860,2.00e-112,42;CL:0002057,2.00e-112,42;CL:0000839,3.04e-106,66;CL:0000557,1.46e-104,67;CL:0000766,8.65e-102,72;CL:0000763,2.41e-72,108;CL:0000049,2.41e-72,108;CL:0002087,5.68e-58,115;CL:0002031,3.05e-55,120;CL:0000738,3.66e-53,136;CL:0002032,5.39e-46,161;CL:0000837,5.39e-46,161;CL:0000037,9.51e-44,168;CL:0000988,4.06e-41,177;CL:0000235,9.14e-18,6;CL:0000134,2.06e-16,354;CL:0002320,6.28e-16,361;CL:0000219,3.17e-14,386;CL:0000048,3.87e-12,427;CL:0000723,7.51e-12,433;CL:0000034,1.77e-11,441;CL:0000990,7.39e-08,8;CL:0000840,4.87e-07,5;CL:0001029,4.87e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-81;42!CL:0000049;5.67e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-43!80;UBERON:0002390!2.82e-41!102;UBERON:0003061!2.82e-41!102;UBERON:0001474!1.99e-40!86;UBERON:0002193!9.08e-40!112;UBERON:0002405!2.54e-39!115;UBERON:0004765!8.41e-33!101;UBERON:0001434!8.41e-33!101;UBERON:0002204!2.32e-18!167;UBERON:0003081!6.61e-15!216;UBERON:0002384!7.89e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-91,76;UBERON:0001474,3.18e-84,82;UBERON:0004765,4.09e-76,90;UBERON:0002405,1.99e-73,93;UBERON:0002390,2.59e-69,98;UBERON:0003061,2.59e-69,98;UBERON:0001434,8.81e-68,100;UBERON:0002193,3.25e-62,108;UBERON:0002204,1.66e-37,167;UBERON:0003081,1.96e-29,203;UBERON:0000926,4.79e-16,315;UBERON:0004120,4.79e-16,315;UBERON:0006603,4.79e-16,315;UBERON:0002384,2.86e-15,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.39334510984468,0,0,0,0,0,0,1.10799081706375,2.20598892217156,0.434021741431704,0.895661896959697,0.32389366601898,0.257575567634187,7.12451370019867,7.55751887377619,6.30718559088322,17.4321777679263,14.8020439687857,10.5300166104335,7.19230980805376,6.14785695669842,3.78371567821736,13.1003358679915,7.74581620300591,0,11.6710250516415,15.0098382531815,6.51698104890745,14.0798590490615,14.1208771913481,9.59005688698562,4.94776950280074,6.98122801675712,3.40979800426155,21.7656928971438,15.3194010666608,9.34233373493363,8.03995728821578,4.17186334736161,3.69221035998698,21.7943820948013,16.2042159834528,9.49387162322653,0.211255286311942,0.425208599930087,1.04829322754188,0.112328631146495,0.750884464207532,1.12507910687956,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,1.9472843619281,2.08955684759121,2.26028532882071,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,1.47730203652438,1.40402559083543,3.12125440806329,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,4.86495122564762,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0.156679895773023,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0.439656701034247,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.779441235357554,1.59437808376036,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891139200981258,0,0,0.281951753939561,0.45120521581504,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0.193766729508018,0.186224142887574,0,0.12729431655633,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p6@ATF5 | |||
}} |
Revision as of 00:35, 21 January 2014
Short description: | p6@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATF5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 130bp_to_ENST00000423777, uc010enq.1_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-91 | 76 |
bone element | 3.18e-84 | 82 |
skeletal element | 4.09e-76 | 90 |
immune system | 1.99e-73 | 93 |
hematopoietic system | 2.59e-69 | 98 |
blood island | 2.59e-69 | 98 |
skeletal system | 8.81e-68 | 100 |
hemolymphoid system | 3.25e-62 | 108 |
musculoskeletal system | 1.66e-37 | 167 |
lateral plate mesoderm | 1.96e-29 | 203 |
mesoderm | 4.79e-16 | 315 |
mesoderm-derived structure | 4.79e-16 | 315 |
presumptive mesoderm | 4.79e-16 | 315 |
connective tissue | 2.86e-15 | 371 |