FFCP PHASE1:Hg19::chr2:242447983..242448034,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11404 | |||
|TSSclassifier=strong | |||
|UniProt=A8K6Z3,C9JFA1,C9JN58,C9JJV0,B7Z9K1,F5H0B2,O00506 | |||
|association_with_transcript=0bp_to_ENST00000405585,ENST00000420551,ENST00000426941,ENST00000429279,ENST00000436917,ENST00000452891,ENST00000483603,ENST00000495372,ENST00000535007,ENST00000545437,NM_006374,uc002wbn.2,uc002wbo.2,uc002wbp.2,uc010fzo.2,uc010zos.1,uc010zot.1,uc010zou.1,uc010zow.1_5end | |||
|coexpression_cluster_id=C2973 | |||
|description=CAGE_peak_1_at_STK25_5end | |||
|id=chr2:242447983..242448034,- | |||
|ontology_enrichment_celltype=CL:0000055!3.12e-22!180;CL:0000220!3.59e-20!246;CL:0002321!3.81e-20!248;CL:0000222!7.30e-18!119;CL:0000183!3.51e-14!59;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0000187!1.68e-11!54;CL:0000680!2.75e-11!57;CL:0000056!2.75e-11!57;CL:0000355!2.75e-11!57;CL:0002078!2.69e-09!44;CL:0000192!6.26e-09!42;CL:0000514!6.26e-09!42;CL:0000115!1.11e-08!35;CL:1000449!2.84e-08!16;CL:0000057!4.70e-08!75;CL:0000359!1.44e-07!32;CL:0002681!4.23e-07!13;CL:0002584!4.23e-07!13;CL:1000507!9.73e-07!12;CL:1000494!9.73e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.61e-08;15!CL:0000115;6.37e-08;36!CL:0000359;2.41e-07;32!CL:0002681;3.86e-07;12!CL:0002584;3.86e-07;12!CL:0000192;4.45e-07;43!CL:0000187;4.93e-07;55!CL:0000393;5.50e-07;61!CL:0000211;5.50e-07;61!CL:0002078;8.04e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.70e-21,250;CL:0000222,1.77e-18,121;CL:0000393,8.35e-13,61;CL:0000211,8.35e-13,61;CL:0000187,1.33e-11,55;CL:0000680,2.16e-11,58;CL:0000056,2.16e-11,58;CL:0000355,2.16e-11,58;CL:0002078,8.66e-10,45;CL:0000115,3.42e-09,36;CL:0000192,4.98e-09,43;CL:0000514,4.98e-09,43;CL:1000449,2.77e-08,15;CL:0000057,3.22e-08,76;CL:0000359,1.44e-07,32;CL:0002681,4.06e-07,12;CL:0002584,4.06e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.45e-07;43!CL:0000355;8.79e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.96e-25!312;UBERON:0000483!2.32e-24!309;UBERON:0000475!5.51e-23!365;UBERON:0005256!1.28e-16!143;UBERON:0000486!1.56e-16!82;UBERON:0002049!5.96e-16!79;UBERON:0007798!5.96e-16!79;UBERON:0004290!2.15e-15!70;UBERON:0003914!2.76e-15!118;UBERON:0000914!4.35e-15!83;UBERON:0002329!4.35e-15!83;UBERON:0003077!4.35e-15!83;UBERON:0003059!4.35e-15!83;UBERON:0007282!4.35e-15!83;UBERON:0009618!4.35e-15!83;UBERON:0007285!4.35e-15!83;UBERON:0000481!2.60e-14!347;UBERON:0000025!2.84e-14!194;UBERON:0001134!5.54e-13!61;UBERON:0002036!5.54e-13!61;UBERON:0003082!5.54e-13!61;UBERON:0004111!6.32e-13!241;UBERON:0000055!6.37e-13!69;UBERON:0004872!7.83e-13!84;UBERON:0002100!1.06e-12!216;UBERON:0002385!1.06e-12!63;UBERON:0001015!1.06e-12!63;UBERON:0000383!1.06e-12!63;UBERON:0001981!2.17e-12!60;UBERON:0007500!2.17e-12!60;UBERON:0004537!2.17e-12!60;UBERON:0006965!2.17e-12!60;UBERON:0000490!5.53e-12!138;UBERON:0000468!8.84e-12!659;UBERON:0000477!1.17e-11!286;UBERON:0001009!2.43e-09!113;UBERON:0004535!3.53e-09!110;UBERON:0001637!3.95e-09!42;UBERON:0003509!3.95e-09!42;UBERON:0004572!3.95e-09!42;UBERON:0000924!1.20e-08!173;UBERON:0006601!1.20e-08!173;UBERON:0004121!2.07e-08!169;UBERON:0003104!2.24e-08!238;UBERON:0009142!2.24e-08!238;UBERON:0004211!2.84e-08!16;UBERON:0001285!2.84e-08!16;UBERON:0007684!2.84e-08!16;UBERON:0003220!2.84e-08!16;UBERON:0004208!2.84e-08!16;UBERON:0000467!3.45e-08!625;UBERON:0006555!5.75e-08!17;UBERON:0005103!5.75e-08!17;UBERON:0000083!5.75e-08!17;UBERON:0009201!5.75e-08!17;UBERON:0004819!5.75e-08!17;UBERON:0006553!5.75e-08!17;UBERON:0003074!5.75e-08!17;UBERON:0003060!5.75e-08!17;UBERON:0000480!5.85e-08!626;UBERON:0000064!7.41e-08!219;UBERON:0000353!1.19e-07!17;UBERON:0004876!1.74e-07!20;UBERON:0000080!2.27e-07!18;UBERON:0002120!2.27e-07!18;UBERON:0004875!2.27e-07!18;UBERON:0005721!2.27e-07!18;UBERON:0005754!2.27e-07!18;UBERON:0007297!2.27e-07!18;UBERON:0000922!3.20e-07!612;UBERON:0001225!4.23e-07!13;UBERON:0008987!4.23e-07!13;UBERON:0002050!7.48e-07!605;UBERON:0005423!7.48e-07!605;UBERON:0000923!7.78e-07!604;UBERON:0005291!7.78e-07!604;UBERON:0006598!7.78e-07!604;UBERON:0002532!7.78e-07!604;UBERON:0009773!9.73e-07!12;UBERON:0001231!9.73e-07!12;UBERON:0004810!9.73e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.61e-08;15!UBERON:0004819;2.61e-08;15!UBERON:0001285;2.61e-08;15!UBERON:0007684;2.61e-08;15!UBERON:0003914;2.63e-08;74!UBERON:0000353;1.51e-07;15!UBERON:0007500;1.96e-07;56!UBERON:0001981;1.96e-07;56!UBERON:0004537;1.96e-07;56!UBERON:0001225;3.86e-07;12!UBERON:0008987;3.86e-07;12!UBERON:0002385;6.07e-07;31!UBERON:0001015;6.07e-07;31!UBERON:0000383;6.07e-07;31!UBERON:0001637;9.73e-07;42!UBERON:0003509;9.73e-07;42!UBERON:0004572;9.73e-07;42!UBERON:0002049;9.83e-07;75!UBERON:0007798;9.83e-07;75 | |||
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| |||
|short_description=p1@STK25 | |||
}} |
Revision as of 09:41, 21 January 2014
Short description: | p1@STK25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STK25_5end |
Coexpression cluster: | C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte |
Association with transcript: | 0bp_to_ENST00000405585, ENST00000420551, ENST00000426941, ENST00000429279, ENST00000436917, ENST00000452891, ENST00000483603, ENST00000495372, ENST00000535007, ENST00000545437, NM_006374, uc002wbn.2, uc002wbo.2, uc002wbp.2, uc010fzo.2, uc010zos.1, uc010zot.1, uc010zou.1, uc010zow.1_5end |
EntrezGene: | STK25 |
HGNC: | 11404 |
UniProt: | A8K6Z3C9JFA1C9JN58C9JJV0B7Z9K1F5H0B2O00506 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.70e-21 | 250 |
mesodermal cell | 1.77e-18 | 121 |
electrically responsive cell | 8.35e-13 | 61 |
electrically active cell | 8.35e-13 | 61 |
muscle cell | 1.33e-11 | 55 |
muscle precursor cell | 2.16e-11 | 58 |
myoblast | 2.16e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.16e-11 | 58 |
meso-epithelial cell | 8.66e-10 | 45 |
endothelial cell | 3.42e-09 | 36 |
smooth muscle cell | 4.98e-09 | 43 |
smooth muscle myoblast | 4.98e-09 | 43 |
epithelial cell of nephron | 2.77e-08 | 15 |
fibroblast | 3.22e-08 | 76 |
vascular associated smooth muscle cell | 1.44e-07 | 32 |
kidney cortical cell | 4.06e-07 | 12 |
renal cortical epithelial cell | 4.06e-07 | 12 |