FFCP PHASE1:Hg19::chr3:125775961..125775982,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54946 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31046 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-280bp_to_ENST00000383598_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_SLC41A3_5end | |||
|id=chr3:125775961..125775982,- | |||
|ontology_enrichment_celltype=CL:0000066!3.68e-21!254;CL:0002076!5.28e-16!43;CL:0000223!5.50e-16!59;CL:0002251!4.92e-10!21;CL:0002150!2.33e-07!3;CL:0000861!2.33e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.32e-11,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.58e-17;29 | |||
|ontology_enrichment_disease=DOID:305!7.01e-21!106;DOID:0050687!1.06e-16!143;DOID:162!2.41e-13!235;DOID:14566!9.88e-13!239;DOID:1749!1.77e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:305;1.34e-07;106!DOID:1749;1.74e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.88e-23,106;DOID:0050687,4.66e-16,143;DOID:162,1.31e-12,235;DOID:14566,3.01e-12,239;DOID:1749,1.65e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.21e-18!9;UBERON:0004119!3.95e-16!169;UBERON:0000925!3.95e-16!169;UBERON:0006595!3.95e-16!169;UBERON:0001007!9.47e-13!155;UBERON:0001555!9.47e-13!155;UBERON:0007026!9.47e-13!155;UBERON:0000077!3.35e-11!130;UBERON:0008947!6.92e-11!38;UBERON:0003258!6.92e-11!38;UBERON:0004921!1.25e-10!129;UBERON:0004185!1.25e-10!129;UBERON:0001004!9.22e-10!72;UBERON:0001041!1.29e-09!98;UBERON:0000065!2.43e-09!53;UBERON:0000072!3.42e-09!46;UBERON:0001557!4.05e-09!19;UBERON:0001048!4.28e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.79e-59;9!UBERON:0001557;5.79e-59;9!UBERON:0000072;8.91e-16;37!UBERON:0000065;6.11e-13;44!UBERON:0001004;3.70e-08;65!UBERON:0001000;1.49e-07;1!UBERON:0000997;1.49e-07;1!UBERON:0005056;1.49e-07;1!UBERON:0004176;1.49e-07;1!UBERON:0005352;1.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.80e-59,9;UBERON:0001557,3.39e-27,19;UBERON:0008947,9.24e-16,38;UBERON:0003258,9.24e-16,38;UBERON:0000072,2.08e-12,47;UBERON:0000065,1.42e-10,54;UBERON:0001004,6.91e-09,74;UBERON:0001007,2.74e-08,145;UBERON:0001555,2.74e-08,145;UBERON:0007026,2.74e-08,145;UBERON:0004921,4.98e-08,118;UBERON:0000997,1.26e-07,1;UBERON:0005056,1.26e-07,1;UBERON:0001000,1.87e-07,1;UBERON:0005352,1.87e-07,1;UBERON:0004119,3.17e-07,160;UBERON:0000925,3.17e-07,160;UBERON:0006595,3.17e-07,160;UBERON:0001041,3.36e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,6.27026040211173,10.1150814046861,9.3994301654558,7.05881425487321,7.1900216550494,8.06720104977729,9.842685495692,7.45641567476315,8.46443745282059,0,0,0,0,0,0,0,0,2.45976877086227,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.376575203107117,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0.709163045303809,0,0,0,0,0,0,0,0,0,6.42736934762042,0.975966209950223,0,0,0,0.359030577639089,0.651884231532048,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0.242780379534093,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,1.46988596121566,0.261177619741208,0,0,9.19185147246309,8.91689668451464,8.0473147912145,0,0,0.225980740780532,0,0.19871461170299,0,3.71547627196126,0.0801588202515337,0.213452994739353,1.79828648623917,0,0,0,0,0,2.82832841540154,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0.168942440653073,0.256241518587947,5.18145512596798,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7962490351128,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0.235479278551542,0,2.24217730651031,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0.883352102537187,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.892769693028288,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,1.51557396436479,0.803892390468535,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC41A3 | |||
}} |
Revision as of 21:05, 21 January 2014
Short description: | p4@SLC41A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC41A3_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -280bp_to_ENST00000383598_5end |
EntrezGene: | SLC41A3 |
HGNC: | 31046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.32e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.80e-59 | 9 |
upper respiratory tract | 3.39e-27 | 19 |
respiratory primordium | 9.24e-16 | 38 |
endoderm of foregut | 9.24e-16 | 38 |
segment of respiratory tract | 2.08e-12 | 47 |
respiratory tract | 1.42e-10 | 54 |
respiratory system | 6.91e-09 | 74 |
digestive system | 2.74e-08 | 145 |
digestive tract | 2.74e-08 | 145 |
primitive gut | 2.74e-08 | 145 |
subdivision of digestive tract | 4.98e-08 | 118 |
mammalian vulva | 1.26e-07 | 1 |
external female genitalia | 1.26e-07 | 1 |
vas deferens | 1.87e-07 | 1 |
spermatic cord | 1.87e-07 | 1 |
endoderm-derived structure | 3.17e-07 | 160 |
endoderm | 3.17e-07 | 160 |
presumptive endoderm | 3.17e-07 | 160 |
foregut | 3.36e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.88e-23 | 106 |
cell type cancer | 4.66e-16 | 143 |
cancer | 1.31e-12 | 235 |
disease of cellular proliferation | 3.01e-12 | 239 |
squamous cell carcinoma | 1.65e-07 | 14 |