FFCP PHASE1:Hg19::chr4:79697168..79697226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18041 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-269bp_to_ENST00000389010_5end | |||
|description=CAGE_peak_3_at_BMP2K_5end | |||
|id=chr4:79697168..79697226,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.87e-11!112;CL:0000049!1.87e-11!112;CL:0000037!7.05e-10!172;CL:0000566!7.05e-10!172;CL:0002032!1.11e-09!165;CL:0000837!1.11e-09!165;CL:0000988!2.10e-08!182;CL:0000839!1.21e-07!70;CL:0000557!3.06e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.68e-11,108;CL:0000049,3.68e-11,108;CL:0002032,1.25e-10,161;CL:0000837,1.25e-10,161;CL:0000037,1.66e-10,168;CL:0000988,4.04e-09,177;CL:0000839,3.84e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.43e-10!51;DOID:0060083!1.43e-10!51;DOID:1240!5.31e-08!39;DOID:8692!1.25e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.31e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.55e-10,51;DOID:0060083,4.55e-10,51;DOID:1240,9.21e-08,39;DOID:8692,1.89e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.71e-09!82;UBERON:0000073!7.09e-09!94;UBERON:0001016!7.09e-09!94;UBERON:0005743!1.38e-08!86;UBERON:0001049!3.37e-08!57;UBERON:0005068!3.37e-08!57;UBERON:0006241!3.37e-08!57;UBERON:0007135!3.37e-08!57;UBERON:0001893!3.41e-08!34;UBERON:0002780!5.64e-08!41;UBERON:0001890!5.64e-08!41;UBERON:0006240!5.64e-08!41;UBERON:0002791!9.70e-08!33;UBERON:0000955!1.23e-07!69;UBERON:0006238!1.23e-07!69;UBERON:0002616!1.25e-07!59;UBERON:0002020!1.34e-07!34;UBERON:0003528!1.34e-07!34;UBERON:0001869!2.23e-07!32;UBERON:0003080!2.77e-07!42;UBERON:0001474!7.35e-07!86;UBERON:0003075!7.97e-07!86;UBERON:0007284!7.97e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.02e-10,89;UBERON:0001017,4.77e-10,81;UBERON:0000073,7.62e-10,53;UBERON:0002616,7.62e-10,53;UBERON:0001049,3.25e-09,56;UBERON:0005068,3.25e-09,56;UBERON:0006241,3.25e-09,56;UBERON:0007135,3.25e-09,56;UBERON:0001893,4.68e-09,34;UBERON:0002780,1.10e-08,41;UBERON:0001890,1.10e-08,41;UBERON:0003080,1.10e-08,41;UBERON:0006240,1.10e-08,41;UBERON:0003528,2.21e-08,34;UBERON:0002020,2.21e-08,34;UBERON:0000955,2.23e-08,68;UBERON:0006238,2.23e-08,68;UBERON:0001869,4.00e-08,32;UBERON:0002791,5.25e-08,32 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.26858963686374,0,0,0.872338524100369,2.53299878168311,1.26343974685366,0.522371256399677,0.245733936501509,1.39560233594486,1.31064823278103,1.31883489114227,0.495065411840187,0.662794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,0.738726348460727,1.22400414746552,0.626909442956176,0.286235987131057,1.91624195102038,2.13422487311165,1.45185470921107,1.55991119954897,2.59745578335141,0,0.383829398097213,0.464448369948228,0.919421224478927,0.6024118375565,1.10926203050036,3.25362242437267,2.13253848731132,1.17440175733939,1.10799081706375,1.60435557976113,2.38711957787437,2.46307021663917,1.94336199611388,2.31818010870768,1.59938062657521,3.02300754951048,2.91100873425379,1.85943229524548,0.822335776043652,2.78735733805593,1.1507695692886,0.512321413058201,2.12834006899727,1.03423704220986,1.29096936716765,0,2.07066573496865,1.36453075028923,1.34834090667051,1.22433556948361,0.962787081228281,1.27867425159808,0.989553900560148,0.797854630486527,1.27867425159808,0.580418477257168,1.13477044938228,1.24564449799115,1.7587406567972,1.0429658368404,0.868755378820466,0.605399502633369,1.84138817993782,0.949387162322653,1.05627643155971,1.70083439972035,0.419317291016752,1.23561494261145,1.50176892841506,1.44653028027372,0.855038231223746,0.79566670879636,0.730656615058536,0,1.09227722252426,1.77901850772711,0.853460445133014,2.00197993518006,2.29900975981793,1.32208974556972,0.954053754535364,2.27685187643779,1.76171156811282,0.382273228125229,2.64342657158052,0.560508562981536,1.31692042387539,0.393419540227666,0.393010762749165,0,0.501559486172034,0,0,0,0.334231370655521,0.294605907474837,0,0.541607727530031,0.768547918354051,0.650296737799391,0.822189523018381,0.829050053357545,0.869409257205157,0.14828656316206,0.267540828089713,0,0.793165398882963,0,0,0.253019692019503,0,0.651083453856419,2.85135613334512,0,0.127986611154418,0,0.473554504088034,1.64225599384209,0,0.267440195783507,0.579297615531196,2.43806866313962,0.670700859703636,0.895037932904712,0.361439152384566,0,0.579386075843295,0,0.973269740605272,1.98523116044542,0.443458794925128,1.40535657109002,4.91171533116422,0.728590576585084,0.370784442784429,2.27183175558278,0.348259474598534,1.59549552622638,0.238490624305342,1.14398982156026,1.85728750664782,1.98762407366705,0.860234595106124,0,0.56530794192401,1.25849830862972,0.550236083880135,1.25396979922086,1.03366703667732,1.77883131343355,0.66944122552934,0.805658634218294,0.760272105718513,1.46437234528902,0.367663080345869,0,1.07159673940896,1.12264686313085,1.46394924628319,0,0,1.64881569537367,0,3.87780264148325,0.436094052142534,1.49091585508596,1.2663051166458,1.72131935057184,2.58152958673932,1.06400514659507,0,0,1.2333377420858,1.55605517699883,1.0776853765575,1.14423332179421,0.605429710579726,1.15235184896,0.468642863667593,0.624320153660641,1.1409436430889,0.747243402759005,0.939475989150119,1.78060238804945,0.702254033511242,1.42907919878425,0.491337269247072,1.34323515528495,0,0.494533858557114,0.910161361938026,0,1.68336113954066,0.875829639103749,1.10825646193673,0,0.30648779579902,1.95309476578576,0.680593098960126,1.4351170855109,1.49490172172997,1.05965950579781,1.20036438433761,0.515262646192195,1.03056216018252,0.930584281657949,1.5189869901714,1.16924406193438,1.51460264546469,0.920498986422993,0.969876340912871,1.77504796258307,0.906768884048762,1.01736355386293,1.15956511897978,0.818238361772504,0.573609190778008,0.975789649036763,0.530119073285941,0.929551542956147,1.65857688024593,1.00928340350251,1.82488679537915,0,2.57296375277154,2.76269842704961,0.928735856063958,0,0.946454400318751,0.505754070234305,0.723033089650446,1.10293972732394,1.08939722046203,0.949082476444386,1.8876383142423,1.37355025587742,1.15424147083917,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,1.18157981336281,2.20731549707325,0.368965315629341,0.686271241194102,0.329250856225877,0,0.703702806881416,0.740707561268237,0.977424915930974,0,1.44331342025273,0.463721619900307,0.821860859650752,0.721832238805369,1.38895653772983,0.761016608938393,0,0,2.70838706696137,3.97807250736704,2.0808362720422,0,0.671928512795438,0.567100388969546,1.25381931783988,1.16253575405585,0.383382679165211,0,1.84901711427775,6.84182781284548,3.17063897517315,6.81709140502452,1.8414389344729,0.381988425558278,2.34434894420094,0,2.26220483947312,2.10240140490742,0.571652865261156,0.224262168690721,1.30788020649984,0.95339771567235,0.775630294546667,0,0,0.797814349754612,2.08014873822732,0.514414748524284,2.83698264046557,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0.710783897485092,0.791951872933429,1.20575750823834,0.871533458600294,1.09970290300263,1.2162378064119,2.00902836572851,2.10833939483032,0.239624855491583,1.14861935834114,1.42636905040718,0.723906533337896,0.61642896765115,0.179060963239896,1.00876629594175,0.591092280605782,0.646882724578552,0.256686072559497,2.28685161800217,2.60279707715243,0.773288812777695,2.01019518401218,3.18969375826582,1.49801404789436,0,1.24324654030811,1.10422342547226,0.500170521059677,1.08506009479894,2.49565033836969,1.24900292158013,0.630809660135739,0.937131319941706,0.300946099727719,0,2.0694614258501,1.32845119707087,0.553107505625109,0.695068915744663,0.391602314925481,0.343143423810856,0.82707210449155,0.862856803274467,0.640365346820666,0.303127571446259,0,0.907170879989041,1.48864684691266,1.2276957863045,1.12264037773229,1.28139149255701,1.02341449813341,0.804269605718038,0,0.308419387605311,0.887808626565635,1.23190734020714,0,0.348631135379878,0.846016147141356,0.200506470303285,2.02578175658972,0.574072240823034,0.910455840033585,0.917870904715969,0.902399225814824,0.924184045252977,0.784349769176855,1.46139224653261,0.844413031143006,3.4120015221269,0.510281115829547,1.29549549661284,0,0.541892875087706,1.00337954770971,1.01950509218015,1.66215201785745,0.895499018888713,3.06963827304308,2.3529190592241,0,0.328014645699706,1.95227036798582,1.23649213977267,1.83138929636687,1.56768049849117,1.14853107599234,0,0,1.16004861950546,0.924291702687866,0.614014698904518,0.827019434907183,1.28904293841928,1.16013355131383,0.852266274161009,0.890320356467374,0.826424576804891,0.960950336825531,2.55225424989168,2.12431339796655,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0.869932992075073,0.37064843820784,1.00187420719394,0.372158369359667,0.632758849437452,1.33441135746677,0,1.28381696410176,0.318203247925937,0,1.43897966066652,1.37268514868027,1.17812402345686,0.202182481573316,0,1.26377536871694,0.48763373908959,1.21856744815642,0,0.545999645631943,0.707027159768564,1.13008116620243,1.10273068709225,1.32687795048244,0.438450885253763,0,0.655894752046633,0.405820753925408,0.92947049429925,0,0.286822704408103,0.88424136911809,0.7133421029625,0,0,0.329294892959902,0.75894634753143,0.699869440489966,0.48111056362756,0.670302275535787,0,0.847294206991012,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0.714695326373367,1.64544909234478,1.29694662238543,1.08006287447623,0.79312517629427,0.320472213382419,0.962479855263359,1.22520107990516,1.48642540100575,1.15415370381156,1.42283686696828,2.39139409093234,0.997896857164083,2.8725805519855,2.11673582723883,0.324621940274555,2.24637742490767,2.73881614839831,1.72347885350326,5.01268954180134,1.69291777801603,1.2847046008296,1.81619736471943,1.27753871307098,3.09154810280188,5.22309299324379,2.46043718681657,3.50383197595008,0.781552381608161,1.9488432172667,1.23087398947712,1.35227839237992,3.3307196799782,1.4098700508785,1.12284324244932,0.293016358543788,0.728163130497081,1.78309414843965,0.852408440419239,1.67121139316383,1.18785872333055,1.22864280839693,2.98244294329889,1.96937182974718,0.445234820091624,1.31843099381408,2.11125408127993,0.796991953004279,2.48655523978033,0.503865495708552,0.715880777515084,1.96935688737711,0.311039587661807,1.52776196950456,0.537063524026827,2.55786185113436,0.295930216910801,2.3948309234694,0,0.969332746095218,1.57705766875147,1.99613798001194,1.30213880542617,1.22443999994674,0,1.593108275997,0.254253650292766,0.472775363535873,1.03423011972439,0.874813840149763,1.56262495439963,2.65722415744152,2.29133233388275,7.62908681585416,0.774054819518572,2.65992857058193,2.19385397153973,1.41620002574687,0.697118721393016,0.846452843541768,1.13942055847001,0.69169171316418,0.807818799687949,1.19512109114209,0.638002319463839,1.55715908783166,0.533034776018635,1.02193298195737,1.72678282034527,0.997270091400938,1.1279783030859,1.37243774022418,2.18168063068596,0.75901493089674,1.43042921082341,1.47698645169619,0.163232808159148,0.424059214301822,2.16388639742091,0,0.265372693510018,1.83309043480088,1.18608451472249,0.741383633679017,0.730953646538188,2.69604531922708,0.802577647298789,2.34264445725339,1.82454789215666,1.36965233252463,0.242780379534093,0,2.41981432097328,3.0607276163049,1.13735843331278,0.60129367765797,0.103688191397247,0.664653872707185,0,0.627865836814451,0,1.13843818411917,1.94144542218394,0.867798691675654,1.07791637155815,1.82824333818845,1.57254001417827,0.859930162358083,0.967563312890852,1.24251839046515,0.903270027585302,0.678923115418936,1.5003541537555,1.58186518546373,1.23337732182076,0.993573058514948,1.32952671507345,1.36885967914362,1.04206466326994,0.426905989478705,0,0.288180834308212,2.86341490414789,0.514784993585894,1.7286575758578,0.248505071130865,0.942776138467182,0.135904206073614,0.523014231561666,1.01998217636322,1.15580235960608,2.40168115483916,1.64286454670392,3.83239764200917,1.28929632425987,0.788662062837943,1.39641200636127,1.3749625440701,2.15361907373044,2.1964690054889,0.429226048136571,0.223171457441873,2.14987111957524,1.44119953416961,0,1.41809728153003,1.81314888438566,1.28066733322951,1.37798474120648,1.86281330544726,1.59045937961861,2.04305109167363,1.92903778158023,1.10031549277787,1.66176135211674,1.349843349309,0.77380195455795,1.82248669974074,0,1.33969702408637,1.41627387964495,0.105600336519406,0.35857467866569,0.575745591958336,1.42939065274673,0,1.017074150619,0.542999601753713,0,0.979762080328227,2.39460383124975,2.13440553948281,0.170388021785422,1.58636928128176,0.732761168390412,1.32506888912221,1.68067843270016,1.3223260174269,0.342173675768659,1.40963004463334,1.06787412567695,0.314408610199332,0.828478110694391,2.97699613087171,0.197611631897944,1.46151118057075,0,0.544017803369474,0.7520696820681,0.306345576763462,0.327872630709804,1.41348686625211,0.886068179966986,1.58634144372552,1.251909307065,2.86704597845036,1.55300672151593,1.36612086471044,1.38348634936231,1.62474530350739,2.42638588066636,1.99825733481477,1.17632909849086,2.81000943484129,2.17381542916238,0.74627401443437,0.934853239388898,0,0.947015026375446,1.50940741051545,0,1.37304041038154,0.907385542579434,0.621748802331122,1.92211694986524,2.07085797312813,2.24901556081802,1.55262956876259,0,0.265841714557995,3.65221543268214,1.35231848097497,0.380805212168795,0.813741466409323,1.09109195521536,1.07410557042488,0.928067519756987,2.3885753321917,1.20008329398946,0.686791410365586,0.673498977531838,2.52369796457302,1.15571898244382,2.35885750512418,0.521988583930423,0.680117776536817,0.694567422971502,2.20263034055821,0.537266523244462,0.926404341482917,1.53498834705095,1.06013487567529,0.38582807654183,0.675769762612291,0.76872455576384,1.38172136692479,0.607719912354764,1.65910123382077,0.779441235357554,3.85308036908753,1.63565394255844,1.31043939538565,0.983091635014877,1.26787274015176,0.79994958341972,2.98736843143594,1.72214979660816,0.567515953566836,0.736423801007363,1.11903606175556,1.24415452006595,2.30209868346573,2.26432103933032,0.786329709279482,1.96577348745625,1.01839517972415,0.637724760305049,0.123935764259002,1.11728983594649,1.27201740261367,3.70650201505891,0,0,1.531227386766,2.76185667914776,0,0.957803154342908,0.82046545696302,3.27693205088234,1.79808856406967,1.93770774758221,0,1.07962490351128,0.353909170043221,0.183428598521679,0.577628330751691,1.52552838186867,1.3807198521202,1.5913297769302,0.902523940191087,1.41193548092464,0,0.785720083444267,0.982631505060581,1.03499260351932,2.566428215499,0,1.44680757550829,2.21955335678674,2.7348740450911,0.548257766857182,1.98484471355718,1.75871244359621,0.127762427639595,0,0.672567444437648,1.21393120847326,1.59363533945908,1.33053555243958,1.38280785066935,0,1.83518279037446,1.57854656550838,1.06374456795571,0.556157009460346,1.25588948560822,2.19961825882403,0.560544326627578,0,0.863710364874486,0.47775168788705,1.00067161847319,2.68623139945635,2.20858708199438,0.695433089210318,0,0.62164849248911,0.85359238546975,1.38251932362818,0,1.06498800657509,1.10777426186905,1.27016115057279,0.22910686854405,0,0,0.559277158988962,0,0.731507549893617,1.29485767437579,0.410651227424988,1.1598144313382,1.45713297917742,0.935757853848423,0.994753875806841,0.951360726220549,0.33883824611688,0.769583617218004,0.754814217833368,0.463044948647668,1.96703604453562,0.470317296361523,0.980593287015622,0.471353094203252,1.76677620403451,0.297046400327086,0.8453114551668,0,1.69171052363736,1.4180735354187,2.59847005404815,1.07132363163395,0,1.12337913364836,1.46067277649303,0,2.00675416412032,1.73548718412503,1.56380427439104,1.74540276136151,1.0580536810308,0.371995018166751,0.462175628631418,0.865253124247578,1.51399709802095,1.09265571963696,0.886889507080059,0.713921808193872,2.6721740526556,1.37842349302267,0.250707539292375,6.82008283964155,12.8622782474966,4.1458471972939,0.930896962757057,0.639701945702943,1.66645102024618,2.0668451147522,1.98639085746745,0.560659312903067,1.01835453245064,1.21270313374932,0.653150243690884,0.342233301085281,1.34704106029175,1.07583308089015,0.665320713092027,0.89543595472072,2.24127426343202,0,1.52702843581198,0,1.71138021856013,1.62758471326295,0,0.603821380773079,2.56454793842586 | |||
|short_description=p3@BMP2K | |||
}} |
Revision as of 01:49, 22 January 2014
Short description: | p3@BMP2K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BMP2K_5end |
Coexpression cluster: | NA |
Association with transcript: | -269bp_to_ENST00000389010_5end |
EntrezGene: | BMP2K |
HGNC: | 18041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.68e-11 | 108 |
common myeloid progenitor | 3.68e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-10 | 161 |
hematopoietic stem cell | 1.66e-10 | 168 |
hematopoietic cell | 4.04e-09 | 177 |
myeloid lineage restricted progenitor cell | 3.84e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.02e-10 | 89 |
central nervous system | 4.77e-10 | 81 |
regional part of nervous system | 7.62e-10 | 53 |
regional part of brain | 7.62e-10 | 53 |
neural tube | 3.25e-09 | 56 |
neural rod | 3.25e-09 | 56 |
future spinal cord | 3.25e-09 | 56 |
neural keel | 3.25e-09 | 56 |
telencephalon | 4.68e-09 | 34 |
regional part of forebrain | 1.10e-08 | 41 |
forebrain | 1.10e-08 | 41 |
anterior neural tube | 1.10e-08 | 41 |
future forebrain | 1.10e-08 | 41 |
brain grey matter | 2.21e-08 | 34 |
gray matter | 2.21e-08 | 34 |
brain | 2.23e-08 | 68 |
future brain | 2.23e-08 | 68 |
cerebral hemisphere | 4.00e-08 | 32 |
regional part of telencephalon | 5.25e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.55e-10 | 51 |
immune system cancer | 4.55e-10 | 51 |
leukemia | 9.21e-08 | 39 |
myeloid leukemia | 1.89e-07 | 31 |