FFCP PHASE1:Hg19::chr4:140098339..140098392,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3317 | |||
|TSSclassifier=strong | |||
|UniProt=D6RGD9 | |||
|association_with_transcript=0bp_to_ENST00000394235,ENST00000511006,ENST00000511184,uc003ihq.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ELF2_5end | |||
|id=chr4:140098339..140098392,- | |||
|ontology_enrichment_celltype=CL:0000763!6.01e-26!112;CL:0000049!6.01e-26!112;CL:0002057!2.89e-25!42;CL:0000766!2.98e-25!76;CL:0000860!4.18e-25!45;CL:0000557!9.03e-22!71;CL:0000839!3.47e-21!70;CL:0002009!7.85e-21!65;CL:0002194!3.45e-20!63;CL:0000576!3.45e-20!63;CL:0000040!3.45e-20!63;CL:0000559!3.45e-20!63;CL:0000037!1.75e-16!172;CL:0000566!1.75e-16!172;CL:0000988!1.17e-14!182;CL:0000738!1.41e-14!140;CL:0002032!1.81e-14!165;CL:0000837!1.81e-14!165;CL:0002031!1.44e-09!124;CL:0002087!3.96e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.50e-19;33!CL:0002057;5.50e-19;33!CL:0000576;3.86e-16;48!CL:0000473;1.66e-13;39!CL:0000234;1.66e-13;39!CL:0000766;5.14e-12;69!CL:0000763;2.72e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.69e-26,108;CL:0000049,4.69e-26,108;CL:0000766,1.21e-25,72;CL:0000860,2.88e-25,42;CL:0002057,2.88e-25,42;CL:0000557,4.19e-22,67;CL:0000473,5.48e-22,48;CL:0000234,5.48e-22,48;CL:0000839,1.64e-21,66;CL:0002009,3.30e-21,61;CL:0002194,1.44e-20,59;CL:0000576,1.44e-20,59;CL:0000040,1.44e-20,59;CL:0000559,1.44e-20,59;CL:0000037,2.23e-16,168;CL:0000988,5.56e-15,177;CL:0000738,1.66e-14,136;CL:0002032,2.32e-14,161;CL:0000837,2.32e-14,161;CL:0002031,1.79e-09,120;CL:0002087,4.90e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-18;42!CL:0000049;9.39e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-30!115;UBERON:0002390!2.52e-23!102;UBERON:0003061!2.52e-23!102;UBERON:0002193!7.12e-20!112;UBERON:0002371!3.26e-17!80;UBERON:0001474!5.56e-17!86;UBERON:0004765!1.69e-14!101;UBERON:0001434!1.69e-14!101;UBERON:0002405!7.92e-14!115;UBERON:0001049!8.38e-11!57;UBERON:0005068!8.38e-11!57;UBERON:0006241!8.38e-11!57;UBERON:0007135!8.38e-11!57;UBERON:0001017!1.15e-09!82;UBERON:0002616!2.13e-09!59;UBERON:0005743!1.50e-08!86;UBERON:0003080!1.68e-08!42;UBERON:0002780!3.94e-08!41;UBERON:0001890!3.94e-08!41;UBERON:0006240!3.94e-08!41;UBERON:0000073!4.54e-08!94;UBERON:0001016!4.54e-08!94;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0000178!3.61e-07!15;UBERON:0000179!3.61e-07!15;UBERON:0000463!3.61e-07!15;UBERON:0002020!1.00e-06!34;UBERON:0003528!1.00e-06!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.28e-08;114!UBERON:0000178;4.12e-07;15!UBERON:0000179;4.12e-07;15!UBERON:0000463;4.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.99e-30,114;UBERON:0002390,1.94e-23,98;UBERON:0003061,1.94e-23,98;UBERON:0002193,7.04e-20,108;UBERON:0002371,2.52e-17,76;UBERON:0001474,4.74e-17,82;UBERON:0004765,4.04e-16,90;UBERON:0001434,1.62e-14,100;UBERON:0002405,1.74e-14,93;UBERON:0001049,1.98e-10,56;UBERON:0005068,1.98e-10,56;UBERON:0006241,1.98e-10,56;UBERON:0007135,1.98e-10,56;UBERON:0000073,1.89e-09,53;UBERON:0002616,1.89e-09,53;UBERON:0001017,2.44e-09,81;UBERON:0001016,9.25e-09,89;UBERON:0002780,3.94e-08,41;UBERON:0001890,3.94e-08,41;UBERON:0003080,3.94e-08,41;UBERON:0006240,3.94e-08,41;UBERON:0000178,3.60e-07,15;UBERON:0000179,3.60e-07,15;UBERON:0000463,3.60e-07,15;UBERON:0000955,4.47e-07,68;UBERON:0006238,4.47e-07,68;UBERON:0003528,9.99e-07,34;UBERON:0002020,9.99e-07,34 | |||
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| |||
|short_description=p1@ELF2 | |||
}} |
Revision as of 03:10, 22 January 2014
Short description: | p1@ELF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELF2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000394235, ENST00000511006, ENST00000511184, uc003ihq.2_5end |
EntrezGene: | ELF2 |
HGNC: | 3317 |
UniProt: | D6RGD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.69e-26 | 108 |
common myeloid progenitor | 4.69e-26 | 108 |
myeloid leukocyte | 1.21e-25 | 72 |
classical monocyte | 2.88e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-25 | 42 |
granulocyte monocyte progenitor cell | 4.19e-22 | 67 |
defensive cell | 5.48e-22 | 48 |
phagocyte | 5.48e-22 | 48 |
myeloid lineage restricted progenitor cell | 1.64e-21 | 66 |
macrophage dendritic cell progenitor | 3.30e-21 | 61 |
monopoietic cell | 1.44e-20 | 59 |
monocyte | 1.44e-20 | 59 |
monoblast | 1.44e-20 | 59 |
promonocyte | 1.44e-20 | 59 |
hematopoietic stem cell | 2.23e-16 | 168 |
hematopoietic cell | 5.56e-15 | 177 |
leukocyte | 1.66e-14 | 136 |
hematopoietic oligopotent progenitor cell | 2.32e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 1.79e-09 | 120 |
nongranular leukocyte | 4.90e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.99e-30 | 114 |
hematopoietic system | 1.94e-23 | 98 |
blood island | 1.94e-23 | 98 |
hemolymphoid system | 7.04e-20 | 108 |
bone marrow | 2.52e-17 | 76 |
bone element | 4.74e-17 | 82 |
skeletal element | 4.04e-16 | 90 |
skeletal system | 1.62e-14 | 100 |
immune system | 1.74e-14 | 93 |
neural tube | 1.98e-10 | 56 |
neural rod | 1.98e-10 | 56 |
future spinal cord | 1.98e-10 | 56 |
neural keel | 1.98e-10 | 56 |
regional part of nervous system | 1.89e-09 | 53 |
regional part of brain | 1.89e-09 | 53 |
central nervous system | 2.44e-09 | 81 |
nervous system | 9.25e-09 | 89 |
regional part of forebrain | 3.94e-08 | 41 |
forebrain | 3.94e-08 | 41 |
anterior neural tube | 3.94e-08 | 41 |
future forebrain | 3.94e-08 | 41 |
blood | 3.60e-07 | 15 |
haemolymphatic fluid | 3.60e-07 | 15 |
organism substance | 3.60e-07 | 15 |
brain | 4.47e-07 | 68 |
future brain | 4.47e-07 | 68 |
brain grey matter | 9.99e-07 | 34 |
gray matter | 9.99e-07 | 34 |