FFCP PHASE1:Hg19::chr5:176730651..176730666,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9765 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000512758_5end | |||
|coexpression_cluster_id=C1588 | |||
|description=CAGE_peak_3_at_RAB24_5end | |||
|id=chr5:176730651..176730666,- | |||
|ontology_enrichment_celltype=CL:0002057!3.11e-28!42;CL:0000860!6.42e-25!45;CL:0000766!1.12e-22!76;CL:0000557!1.72e-19!71;CL:0000738!3.20e-19!140;CL:0000763!9.23e-19!112;CL:0000049!9.23e-19!112;CL:0002009!1.60e-18!65;CL:0000037!6.43e-18!172;CL:0000566!6.43e-18!172;CL:0002194!2.63e-17!63;CL:0000576!2.63e-17!63;CL:0000040!2.63e-17!63;CL:0000559!2.63e-17!63;CL:0002032!8.58e-17!165;CL:0000837!8.58e-17!165;CL:0000839!1.89e-16!70;CL:0000988!2.16e-16!182;CL:0002087!1.14e-14!119;CL:0002031!6.00e-14!124;CL:0002393!8.40e-08!9;CL:0002397!8.40e-08!9;CL:0000034!1.42e-07!444;CL:0000723!1.94e-07!436;CL:0000048!2.13e-07!430;CL:0000094!5.91e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-54;33!CL:0002057;1.22e-54;33!CL:0000576;1.72e-40;48!CL:0000473;6.02e-38;39!CL:0000234;6.02e-38;39!CL:0000766;1.35e-32;69!CL:0000094;1.34e-18;8!CL:0000763;4.66e-15;100!CL:0002393;1.56e-14;6!CL:0002397;1.56e-14;6!CL:0000081;4.65e-13;11!CL:0002087;1.17e-11;104!CL:0000738;1.10e-09;136!CL:0000875;1.27e-08;3!CL:0002396;1.27e-08;3!CL:0000775;2.36e-08;3!CL:0000767;2.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-80,42;CL:0002057,1.76e-80,42;CL:0000473,7.82e-69,48;CL:0000234,7.82e-69,48;CL:0000766,1.40e-65,72;CL:0002009,3.01e-59,61;CL:0000557,2.28e-55,67;CL:0002194,3.38e-55,59;CL:0000576,3.38e-55,59;CL:0000040,3.38e-55,59;CL:0000559,3.38e-55,59;CL:0000839,4.21e-48,66;CL:0000763,7.09e-47,108;CL:0000049,7.09e-47,108;CL:0000738,2.03e-42,136;CL:0000037,6.77e-34,168;CL:0002032,4.00e-33,161;CL:0000837,4.00e-33,161;CL:0002087,7.83e-33,115;CL:0000988,2.43e-31,177;CL:0002031,3.66e-31,120;CL:0002393,2.04e-21,9;CL:0002397,2.04e-21,9;CL:0000094,9.94e-19,8;CL:0000081,3.76e-13,11;CL:0000134,1.76e-12,354;CL:0002320,6.48e-12,361;CL:0000219,4.24e-11,386;CL:0000034,1.87e-10,441;CL:0000723,2.40e-10,433;CL:0000048,3.54e-10,427;CL:0000875,1.32e-08,3;CL:0002396,1.32e-08,3;CL:0000775,2.18e-08,3;CL:0000767,2.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.82e-57;42!CL:0000049;3.28e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.88e-19!112;UBERON:0002390!8.13e-19!102;UBERON:0003061!8.13e-19!102;UBERON:0001474!1.14e-15!86;UBERON:0002371!1.14e-14!80;UBERON:0004765!1.92e-13!101;UBERON:0001434!1.92e-13!101;UBERON:0002204!4.62e-11!167;UBERON:0002405!2.28e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-10;15!UBERON:0000179;2.10e-10;15!UBERON:0000463;2.10e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-52,98;UBERON:0003061,2.16e-52,98;UBERON:0002193,3.90e-48,108;UBERON:0002371,2.54e-47,76;UBERON:0001474,4.63e-45,82;UBERON:0004765,6.60e-40,90;UBERON:0002405,3.21e-38,93;UBERON:0001434,1.26e-34,100;UBERON:0003081,1.44e-23,203;UBERON:0002204,1.33e-19,167;UBERON:0000926,3.38e-12,315;UBERON:0004120,3.38e-12,315;UBERON:0006603,3.38e-12,315;UBERON:0002384,3.79e-11,371;UBERON:0000178,1.83e-10,15;UBERON:0000179,1.83e-10,15;UBERON:0000463,1.83e-10,15 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0,0.730310090387373,0,0.492484232307152,0.204000691244253,0,0,0.273748850145768,0,0.305653622991805,0.0821005894499457,0,5.11373559903575,1.91914699048606,2.01260960310899,0,0,0,0,0.284338464974843,0,8.30993112797816,2.20598892217156,3.68918480216948,0,0,0,2.4717700592526,2.64513160582167,3.15359279544161,2.55671940596253,1.6446715520873,4.33588919253145,2.8769239232215,3.33008918487831,5.43909128743746,3.7922024881028,7.10033151942209,5.41705946377367,2.63539275359647,0.818718450173537,4.71919317334678,6.12167784741805,3.53021929783703,8.31138263538754,2.30895910130701,2.99195486432448,4.26224750532694,6.96502172708602,2.26954089876456,3.73693349397345,1.7587406567972,0.521482918420201,3.25783267057675,7.87019353423379,4.78760926783834,9.81033401066742,7.39393502091796,10.2050063983221,9.43463904787692,5.50410292617826,3.00353785683013,1.76798145366788,20.8059302931111,11.5371672775472,9.1332076882317,0,0,1.77901850772711,1.70692089026603,0,0.574752439954483,0,1.90810750907073,0,0,0,0,3.92355994087075,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0.557052284425868,0.294605907474837,0,0,0,0.390178042679635,0.328875809207352,0,0,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0.403213486449465,1.33720097891754,0.434473211648397,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.087834785693126,0.196468613246569,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,1.67360306382335,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,18.4492584410489,31.022421131866,0.436094052142534,0,0,0.794455084879313,0.573673241497627,0.709336764396714,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0.193260853163297,1.09098448236334,0,0,0.662648841607426,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0.473227200159376,0,0.241011029883482,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.721832238805369,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.829312462163088,0.864719720501769,0.12624243342638,0,0,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0.224170287987055,1.57624608161542,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0,10.4860983352606,8.97484377612075,5.8018171881045,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0.391602314925481,0,0.82707210449155,3.01999881146064,1.70764092485511,0.909382714338778,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.482561763430822,1.48418066444991,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0.483437798366489,1.20303882181971,0.184161977871793,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.27470839445503,0.247528499761764,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.275673144969061,0,0.145016693914229,0.255679882248303,0.534192213880424,0.165284915360978,0.768760269460425,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0.616067160352178,0,0,0.74129687641568,0.572499546967965,0.372158369359667,0.316379424718726,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.54907405947211,0.589062011728432,0.606547444719948,1.58510321173008,0.421258456238981,0,1.46228093778771,2.11300293513511,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0.845086807596724,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0.886860307073351,0,0.507447609232169,3.0585488285695,1.70894156152249,3.097013080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| |||
|short_description=p3@RAB24 | |||
}} |
Revision as of 09:18, 22 January 2014
Short description: | p3@RAB24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB24_5end |
Coexpression cluster: | C1588_Eosinophils_CD14CD16_CD14_Neutrophils_Basophils_Whole_embryonic |
Association with transcript: | 0bp_to_ENST00000512758_5end |
EntrezGene: | RAB24 |
HGNC: | 9765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-52 | 98 |
blood island | 2.16e-52 | 98 |
hemolymphoid system | 3.90e-48 | 108 |
bone marrow | 2.54e-47 | 76 |
bone element | 4.63e-45 | 82 |
skeletal element | 6.60e-40 | 90 |
immune system | 3.21e-38 | 93 |
skeletal system | 1.26e-34 | 100 |
lateral plate mesoderm | 1.44e-23 | 203 |
musculoskeletal system | 1.33e-19 | 167 |
mesoderm | 3.38e-12 | 315 |
mesoderm-derived structure | 3.38e-12 | 315 |
presumptive mesoderm | 3.38e-12 | 315 |
connective tissue | 3.79e-11 | 371 |
blood | 1.83e-10 | 15 |
haemolymphatic fluid | 1.83e-10 | 15 |
organism substance | 1.83e-10 | 15 |