FFCP PHASE1:Hg19::chr6:114178630..114178643,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6759 | |||
|TSSclassifier=strong | |||
|UniProt=P29966 | |||
|association_with_transcript=89bp_to_ENST00000368635_5end | |||
|description=CAGE_peak_2_at_MARCKS_5end | |||
|id=chr6:114178630..114178643,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.50e-13!42;CL:0000055!3.47e-12!180;CL:0000860!1.11e-10!45;CL:0000057!5.16e-10!75;CL:0002371!5.50e-10!591;CL:0000144!4.80e-09!625;CL:0002009!8.43e-09!65;CL:0002194!1.44e-08!63;CL:0000576!1.44e-08!63;CL:0000040!1.44e-08!63;CL:0000559!1.44e-08!63;CL:0000048!2.24e-08!430;CL:0000723!4.07e-08!436;CL:0000766!1.06e-07!76;CL:0000034!1.98e-07!444;CL:0000222!5.60e-07!119;CL:0000548!6.36e-07!679;CL:0000004!6.36e-07!679;CL:0000255!6.36e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-10;33!CL:0002057;1.03e-10;33!CL:0000473;2.73e-10;39!CL:0000234;2.73e-10;39!CL:0000576;3.06e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.38e-15,48;CL:0000234,2.38e-15,48;CL:0000860,1.39e-13,42;CL:0002057,1.39e-13,42;CL:0002009,1.49e-10,61;CL:0002194,2.52e-10,59;CL:0000576,2.52e-10,59;CL:0000040,2.52e-10,59;CL:0000559,2.52e-10,59;CL:0000057,3.43e-10,76;CL:0000048,3.95e-09,427;CL:0000766,4.97e-09,72;CL:0000723,7.59e-09,433;CL:0000034,4.43e-08,441;CL:0000557,1.00e-07,67;CL:0000222,2.30e-07,121;CL:0000839,5.32e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.52e-12!659;UBERON:0000467!2.55e-11!625;UBERON:0000480!4.24e-11!626;UBERON:0002204!2.18e-09!167;UBERON:0003081!3.25e-09!216;UBERON:0002050!7.77e-07!605;UBERON:0005423!7.77e-07!605;UBERON:0000923!8.46e-07!604;UBERON:0005291!8.46e-07!604;UBERON:0006598!8.46e-07!604;UBERON:0002532!8.46e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.17e-11,315;UBERON:0004120,2.17e-11,315;UBERON:0006603,2.17e-11,315;UBERON:0003081,5.11e-11,203;UBERON:0002204,2.00e-10,167;UBERON:0000923,1.70e-09,560;UBERON:0010316,1.70e-09,560;UBERON:0005291,1.70e-09,560;UBERON:0006598,1.70e-09,560;UBERON:0010317,1.70e-09,560;UBERON:0002532,1.70e-09,560;UBERON:0002050,3.32e-09,564;UBERON:0005423,1.17e-07,581;UBERON:0002371,1.19e-07,76;UBERON:0001434,4.47e-07,100;UBERON:0000922,4.64e-07,592;UBERON:0001474,5.09e-07,82;UBERON:0002405,7.40e-07,93 | |||
|phase1_expression=42.1493839907691,27.8330681058278,16.2097564710367,106.077696254318,61.6806310309657,87.2338524100369,2.53299878168311,0.631719873426831,1.04474251279935,5.89761447603621,34.1922572306489,2.40285509343189,2.90143676051299,5.81701858912219,12.9244976533887,36.3055579083959,35.5589771534146,27.7517834347202,31.715631921383,49.9871495791759,51.612174884796,11.9112794161673,15.4567433050771,13.1399448069969,7.40701573609337,3.20936304141395,4.26923065139718,3.14843125254717,6.29382842958246,1.15148819429164,7.43117391917165,6.43594857135249,7.53014796945625,1.84877005083394,0,0,1.76160263600908,19.3898392986157,31.2849338053421,30.1645110295034,28.4372652284704,11.3362783106643,16.7424118962221,20.2103551903595,13.9814099164859,12.3717871205786,70.6584272193281,31.2487594896588,23.5376841880279,44.3046284176112,28.9461598377884,15.1348627128695,61.7094768518547,20.0100251910986,29.7938270507552,38.4014372666914,14.7369321031237,14.1575795200403,86.0095737562236,13.1580901101198,42.1962503027367,13.1940520074686,14.9597743216224,10.2293940127847,206.338768664923,101.561955219714,125.810094297106,28.1398505087552,23.9882142473293,10.8594422352558,164.668664716276,36.4594859627689,62.6595527132951,9.71774317034932,18.4965740969588,12.9988360215193,2.02191536063691,5.40636814229423,3.05378614724452,10.5454715184262,11.7360839547463,9.6812001495256,0,2.18455444504853,2.66852776159066,6.82768356106412,2.00197993518006,1.14950487990897,3.30522436392431,2.86216126360609,3.41527781465669,7.04684627245127,3.44045905312706,0,20.7388168303168,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,1.20460095262218,0.383959833463255,0,0,0,0,0,0,9.75227465255847,9.38981203585091,9.07824189089065,262.404824631195,4.01070328508712,11.0083354410226,0,2.91980922181582,17.5834759925166,29.7117392599836,13.6143917824345,1.37528029272598,1.82147644146271,4.07862887062872,2.27183175558278,1.21890816109487,1.86141144726411,1.66943437013739,0,1.11437250398869,5.76410981363445,5.16140757063675,8.33137203858226,1.13061588384802,9.64848703282784,25.8610959423663,2.50793959844173,11.1119206442811,6.40379272836078,5.35552980423472,251.365493876108,7.60272105718513,12.4471649349566,179.419583208784,21.0636906449257,6.51888016473782,9.20570427767296,4.50445921933289,0,2.84779697870439,6.04565754970344,13.1780417436063,50.4114343392823,1.3082821564276,40.2547280873208,11.0168545148184,8.34177839123278,82.3221101549095,5.32002573297536,4.48542080113846,12.8098794875646,10.853372130355,1.24484414159907,15.3570166159444,14.0577236677575,46.4667302869939,6.91411109375999,2.10889288650417,2.18512053781224,1.71141546463335,4.03511437489863,20.7859062599464,11.6548519945055,27.9497105337474,3.67477508258808,18.0566446448299,1.75653827998801,32.0760771466154,32.391967735491,18.2032272387605,2.87447256726495,13.9718974581875,6.00568895385428,1.6623846929051,17.1201272143527,30.0358039883039,10.3664260645552,15.5402090929229,172.752219168374,11.1049842185655,5.51022943014861,96.9294240352619,74.6100311686298,199.671418535363,8.56137539125313,17.5527385530917,110.298689842477,214.316274333253,18.0417801338907,119.133143875464,116.44314634545,82.0122079572992,9.83451435400828,3.67195621010264,2.45471508531751,2.58124135850103,0.731842236777572,1.59035721985782,4.06678800043314,3.42081481550722,6.81266297364197,7.2995471815166,0,15.4377825166292,0,5.10804720835177,5.0531563716871,10.4109984035063,8.26064981382698,5.78426471720357,12.1323370005633,6.75426276686459,7.59265981155509,13.2134681996961,10.0072947213927,3.07797725557112,111.461473648322,40.6701144029993,6.173610169971,14.7008711385542,0,0,2.36315962672562,0.882926198829301,6.64137568132813,12.1813145311953,7.79227026401241,0,0.402115889646523,2.68506490959736,4.88712457965487,6.23960871167747,17.3197610430328,8.57884996815569,10.6841911754598,9.96128489551409,47.6875077953909,34.0554932499931,0,0,28.3149557000507,3.51006397708857,9.80965671105606,8.43604505880993,1.6798212819886,0.992425680696705,3.04498977189684,1.74380363108377,0.383382679165211,0.492663237895943,0.528290604079356,2.48793738648926,3.31475892859011,1.38866676769018,8.50871783515065,3.4378958300245,1.17217447210047,3.4214489204541,5.14137463516618,33.9387655363627,5.14487578735041,40.8157147017113,43.1600468144947,8.2138880119464,16.6760513327533,0,9.298330278116,11.4353390131494,31.2022310734098,8.48784335065069,15.6034045225606,7.99266537048298,4.43231780340257,3.25572963234866,4.93944202068461,8.79487697593085,9.95097456479128,5.543663110534,18.6892413776943,6.97226766880235,5.89840647974137,75.4067439975381,72.3250211662262,126.500363689819,7.18874566474748,24.1210065251639,7.13184525203592,5.64647096003559,5.54786070886035,2.50685348535854,0,0.591092280605782,0,0.513372145118994,5.84417635711666,5.20559415430487,11.5993321916654,15.0764638800914,29.3451825760455,26.9642528620986,29.9161459204025,14.5045429702612,7.48418099486753,2.00068208423871,37.16330824686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| |||
|short_description=p2@MARCKS | |||
}} |
Revision as of 13:29, 22 January 2014
Short description: | p2@MARCKS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCKS_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000368635_5end |
EntrezGene: | MARCKS |
HGNC: | 6759 |
UniProt: | P29966 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.38e-15 | 48 |
phagocyte | 2.38e-15 | 48 |
classical monocyte | 1.39e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-13 | 42 |
macrophage dendritic cell progenitor | 1.49e-10 | 61 |
monopoietic cell | 2.52e-10 | 59 |
monocyte | 2.52e-10 | 59 |
monoblast | 2.52e-10 | 59 |
promonocyte | 2.52e-10 | 59 |
fibroblast | 3.43e-10 | 76 |
multi fate stem cell | 3.95e-09 | 427 |
myeloid leukocyte | 4.97e-09 | 72 |
somatic stem cell | 7.59e-09 | 433 |
stem cell | 4.43e-08 | 441 |
granulocyte monocyte progenitor cell | 1.00e-07 | 67 |
mesodermal cell | 2.30e-07 | 121 |
myeloid lineage restricted progenitor cell | 5.32e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.17e-11 | 315 |
mesoderm-derived structure | 2.17e-11 | 315 |
presumptive mesoderm | 2.17e-11 | 315 |
lateral plate mesoderm | 5.11e-11 | 203 |
musculoskeletal system | 2.00e-10 | 167 |
germ layer | 1.70e-09 | 560 |
germ layer / neural crest | 1.70e-09 | 560 |
embryonic tissue | 1.70e-09 | 560 |
presumptive structure | 1.70e-09 | 560 |
germ layer / neural crest derived structure | 1.70e-09 | 560 |
epiblast (generic) | 1.70e-09 | 560 |
embryonic structure | 3.32e-09 | 564 |
developing anatomical structure | 1.17e-07 | 581 |
bone marrow | 1.19e-07 | 76 |
skeletal system | 4.47e-07 | 100 |
embryo | 4.64e-07 | 592 |
bone element | 5.09e-07 | 82 |
immune system | 7.40e-07 | 93 |