FFCP PHASE1:Hg19::chr9:139379069..139379135,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1549 | |||
|description=CAGE_peak_at_chr9:139379069..139379135,- | |||
|id=chr9:139379069..139379135,- | |||
|ontology_enrichment_celltype=CL:0000066!3.33e-36!254;CL:0000223!5.15e-20!59;CL:0002076!3.62e-19!43;CL:0002368!4.55e-10!13;CL:0002251!1.21e-09!21;CL:0002159!3.51e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.07e-21;42!CL:0002368;5.93e-15;13!CL:0002159;6.11e-11;14!CL:0002251;1.31e-10;20!CL:0002202;5.39e-09;9!CL:0002632;5.39e-09;9!CL:0000244;6.41e-08;4!CL:0000731;6.41e-08;4!CL:0002327;5.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.96e-43,253;CL:0000223,5.15e-28,58;CL:0002076,3.50e-25,42;CL:0002368,5.59e-15,13;CL:0002159,5.48e-11,14;CL:0002251,1.50e-10,20;CL:0002202,4.94e-09,9;CL:0002632,4.94e-09,9;CL:0000244,6.60e-08,4;CL:0000731,6.60e-08,4;CL:0002321,1.17e-07,250;CL:0000076,1.79e-07,63;CL:0002327,5.60e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;7.07e-16;58!UBERON:0008947;1.74e-08;29 | |||
|ontology_enrichment_disease=DOID:305!8.76e-25!106;DOID:0050687!5.79e-15!143;DOID:1749!1.26e-09!14;DOID:162!7.27e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.72e-12;14!DOID:5093;9.36e-08;4!DOID:1612;9.36e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.65e-23,106;DOID:0050687,9.97e-15,143;DOID:1749,5.12e-12,14;DOID:162,4.77e-08,235;DOID:5093,9.24e-08,4;DOID:1612,9.24e-08,4;DOID:14566,1.38e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.41e-33!169;UBERON:0000925!3.41e-33!169;UBERON:0006595!3.41e-33!169;UBERON:0001007!2.91e-28!155;UBERON:0001555!2.91e-28!155;UBERON:0007026!2.91e-28!155;UBERON:0001004!5.20e-23!72;UBERON:0000077!9.94e-22!130;UBERON:0004921!6.86e-21!129;UBERON:0004185!6.86e-21!129;UBERON:0001041!6.05e-20!98;UBERON:0005911!7.25e-19!82;UBERON:0000065!1.45e-15!53;UBERON:0003104!2.42e-13!238;UBERON:0009142!2.42e-13!238;UBERON:0000481!1.01e-12!347;UBERON:0000072!1.39e-12!46;UBERON:0000161!1.52e-12!35;UBERON:0002530!2.73e-12!59;UBERON:0008947!9.95e-12!38;UBERON:0003258!9.95e-12!38;UBERON:0000475!1.06e-11!365;UBERON:0000466!1.47e-11!126;UBERON:0003929!3.86e-11!54;UBERON:0000166!6.99e-11!21;UBERON:0005153!2.48e-10!37;UBERON:0003102!3.04e-10!95;UBERON:0000165!3.46e-10!28;UBERON:0000930!3.46e-10!28;UBERON:0001048!1.07e-09!168;UBERON:0002365!1.15e-09!31;UBERON:0002330!1.15e-09!31;UBERON:0000062!2.18e-09!511;UBERON:0005177!4.06e-09!107;UBERON:0005157!5.78e-09!51;UBERON:0000464!1.25e-08!104;UBERON:0009569!1.96e-08!113;UBERON:0005178!1.18e-07!34;UBERON:0002224!1.18e-07!34;UBERON:0002100!1.52e-07!216;UBERON:0001557!2.19e-07!19;UBERON:0005181!3.16e-07!35;UBERON:0000064!5.27e-07!219;UBERON:0004807!8.47e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;6.68e-14;31!UBERON:0002330;6.68e-14;31!UBERON:0000065;1.74e-12;44!UBERON:0001004;2.38e-12;65!UBERON:0000072;6.05e-12;37!UBERON:0005911;3.46e-10;36!UBERON:0000161;6.54e-10;19!UBERON:0000166;6.54e-10;19!UBERON:0000365;8.64e-09;5!UBERON:0000486;2.72e-08;12!UBERON:0001737;2.76e-08;9!UBERON:0001557;2.76e-08;9!UBERON:0004807;2.96e-08;22!UBERON:0000165;8.37e-08;28!UBERON:0002423;1.02e-07;25!UBERON:0007196;1.03e-07;15!UBERON:0001558;1.03e-07;15!UBERON:0000344;1.98e-07;20!UBERON:0002530;2.54e-07;57!UBERON:0005910;3.26e-07;6!UBERON:0001911;5.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.01e-30,160;UBERON:0000925,9.01e-30,160;UBERON:0006595,9.01e-30,160;UBERON:0001007,3.43e-24,145;UBERON:0001555,3.43e-24,145;UBERON:0007026,3.43e-24,145;UBERON:0001004,1.11e-23,74;UBERON:0001041,3.16e-20,87;UBERON:0004921,7.90e-19,118;UBERON:0005911,2.41e-17,82;UBERON:0000065,8.51e-16,54;UBERON:0002365,3.27e-14,31;UBERON:0002330,3.27e-14,31;UBERON:0008947,2.30e-13,38;UBERON:0003258,2.30e-13,38;UBERON:0000072,5.82e-13,47;UBERON:0002530,2.67e-12,59;UBERON:0001048,5.74e-12,160;UBERON:0005177,1.41e-11,101;UBERON:0009569,1.78e-10,112;UBERON:0003929,3.01e-10,54;UBERON:0000161,1.32e-09,36;UBERON:0000166,2.20e-09,22;UBERON:0000365,6.70e-09,5;UBERON:0005157,2.80e-08,47;UBERON:0005153,2.92e-08,37;UBERON:0001737,4.07e-08,9;UBERON:0009497,9.22e-08,25;UBERON:0000015,9.22e-08,25;UBERON:0002423,9.22e-08,25;UBERON:0006235,9.22e-08,25;UBERON:0004161,9.22e-08,25;UBERON:0007196,1.02e-07,15;UBERON:0001558,1.02e-07,15;UBERON:0003102,1.17e-07,99;UBERON:0000344,1.88e-07,20;UBERON:0000915,2.10e-07,52;UBERON:0000165,2.32e-07,29;UBERON:0000930,2.32e-07,29;UBERON:0005910,2.65e-07,6;UBERON:0005178,2.91e-07,34;UBERON:0002224,2.91e-07,34;UBERON:0001911,5.60e-07,4;UBERON:0005333,5.60e-07,4;UBERON:0008425,5.60e-07,4;UBERON:0005311,5.60e-07,4;UBERON:0005181,6.02e-07,35;UBERON:0002100,7.30e-07,199;UBERON:0000033,7.65e-07,56;UBERON:0004807,7.77e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7913183671839,18.6747669642515,30.3198288336766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,8.37879163072847,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,16.5715739814163,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.831192346452549,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,13.3349988682675,12.8190676677692,12.3325976017272,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0.721879481669586,0.828147600278907,1.01150814046861,1.20505514941741,2.31617342738027,1.30727666455444,1.42362371466658,1.34831308160164,1.37355025587742,2.30848294167834,0,0,0.4115740113314,0,22.8159062679296,11.7939266001315,7.68026878685825,0.441463099414651,3.81264159483652,0,23.9255622190804,20.2323155863715,2.81481122752566,1.48141512253647,0,0,0,0.115930404975077,0,0,0,0,9.4824527755113,9.4433477830436,0,0,0,12.185398418281,8.39910640994298,5.52922879245307,3.31366534000539,2.61570544662566,4.21720947081732,0,0,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0.871533458600294,0,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,1.20859449591622,26.8678670206402,6.07734526976916,0,0,0.524497659837696,2.25599806453706,0.847168708148562,2.35304930753057,0,0.633309773357254,0,0,0,0,0.270946437543853,0,0,1.66215201785745,0.447749509444357,0,0,0,0,0,1.23649213977267,0,0,33.307401203778,25.3523495954243,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,19.1730501818735,22.2940478143523,9.18811529961006,14.4655626623436,0,0.62962469366128,0,0,0,0,0.9266210955196,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,12.6050967670421,9.38423185750102,25.0449265181042,1.60044461320525,23.2472901242464,18.5318623234388,11.0857538384169,12.4050636111758,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,0,0.890469640183247,0,0,0.597743964753209,0,1.0077309914171,0,0,0.933118762985422,0.629078458031288,3.04335996948536,0,0,0,0,0,0.371072392647405,0,7.29197731038653,52.4759999977174,0,7.39657413855748,1.5255219017566,2.6002644994473,1.03423011972439,0,0,0,0,0,0,0,1.31631238292384,4.13966161372163,0.697118721393016,0.538651809526579,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,1.9566461893209,1.21390189767046,0,0,0,0,0,0,0,0,0.313932918407225,0,1.70765727617876,0,0.520679215005393,5.09560466554764,7.13885493959301,5.94070672022902,0.51595809741485,0.387025325156341,0.0730893170861856,0.410577285266046,0.193978032976839,0,0,0,0.19871461170299,0.253243183823515,3.32437350649165,6.4127056201227,1.92107695265417,0,5.18725501754782,0,5.3194449337209,0.14405479798815,0.372757606696298,2.35694034616795,0,0,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,2.20592910460226,2.47247575143499,2.56133466645903,0,0,0,0,0,0,0,0,0,0.182248669974074,3.68978156359193,0.236417121897595,0.104909176269996,2.11200673038813,0,4.79787993298613,0,0,1.27134268827375,0,0,0.326587360109409,0,0,0,0,39.4225508594042,2.65013777824443,0.258565912723101,0.13223260174269,2.9084762440336,0.704815022316672,0.106787412567695,0.943225830597996,0,0,0.790446527591777,0,2.55336503108073,0,0,0,0,1.72759505875258,0.886068179966986,0,0,0,0,0.0620964029413835,0,1.12482367165896,0,0,0,0,0,0.298509605773748,0,0,0.947015026375446,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0,0.107410557042488,0,1.19428766609585,0.400027764663154,0.686791410365586,0.336749488765919,3.78554694685953,0,3.64550705337374,3.65392008751296,0.906823702049089,1.85217979459067,0,5.55175407352611,0,0.438568099157414,0.883445729729405,0.192914038270915,0,0,0,0.911579868532147,0,0,0,0,0,0.491545817507439,2.11312123358627,0,0,0,0,0,1.81843360035278,3.11038630016486,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0,0.207471757392654,0,0,17.3721461746815,2.24142474360707,5.86971515269373,0.808679663052368,0,0,0,0,0,39.0757005616546,0,1.63771917510097,1.6264169483875,0.405225507710368,0,0,0.0634158101939068,0,4.38606213485746,0,0,1.14986184875636,0,0,6.06965604236632,0.227662191351298,0.354809480650555,0,0.685952037749674,0.679697329768317,0.394636641377094,0.354581522651905,2.78078504730173,0.549451649953598,0,0,0,0,1.43325506366115,0,0,0.929931402945002,0,0,2.90102629828252,1.0243108625637,0.691259661814092,7.744092458765,0,0,0,1.3746412112643,0,0,2.57267493134922,0.098150233615243,1.09726132484042,0,0,0,0,0,0.596852325484105,0,0,0,0.905777061400041,0.385870790539723,0,19.2830091508224,0,5.89191367754065,0,0,0,0,0,0.0644578879735772,0,2.67830907908486,6.70500256259814,4.17255106783675,5.84269110597214,3.66983426723633,0,0,0.339957450954573,0,5.290268405154,0.371995018166751,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0,0.710478008196067,0.558672428662721,2.69116470193472,0.12729431655633,0,1.08858373948481,0.684466602170562,5.11875602910865,2.29511057256564,3.65926392200615,1.87227517805241,0.853818767021724,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr9:139379069..139379135,- | |||
}} |
Revision as of 04:08, 23 January 2014
Short description: | p@chr9:139379069..139379135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139379069..139379135, - |
Coexpression cluster: | C1549_breast_liver_Sebocyte_Hepatocyte_pancreas_Bronchial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.96e-43 | 253 |
endodermal cell | 5.15e-28 | 58 |
endo-epithelial cell | 3.50e-25 | 42 |
respiratory epithelial cell | 5.59e-15 | 13 |
general ecto-epithelial cell | 5.48e-11 | 14 |
epithelial cell of alimentary canal | 1.50e-10 | 20 |
epithelial cell of tracheobronchial tree | 4.94e-09 | 9 |
epithelial cell of lower respiratory tract | 4.94e-09 | 9 |
transitional epithelial cell | 6.60e-08 | 4 |
urothelial cell | 6.60e-08 | 4 |
embryonic cell | 1.17e-07 | 250 |
squamous epithelial cell | 1.79e-07 | 63 |
mammary gland epithelial cell | 5.60e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.65e-23 | 106 |
cell type cancer | 9.97e-15 | 143 |
squamous cell carcinoma | 5.12e-12 | 14 |
cancer | 4.77e-08 | 235 |
thoracic cancer | 9.24e-08 | 4 |
breast cancer | 9.24e-08 | 4 |
disease of cellular proliferation | 1.38e-07 | 239 |