FFCP PHASE1:Hg19::chrX:80458001..80458016,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10823 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=85bp_to_uc010nmn.2_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_8_at_SH3BGRL_5end | |||
|id=chrX:80458001..80458016,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.63e-61!65;CL:0002194!2.08e-61!63;CL:0000576!2.08e-61!63;CL:0000040!2.08e-61!63;CL:0000559!2.08e-61!63;CL:0002057!1.47e-56!42;CL:0000557!8.58e-55!71;CL:0000766!1.41e-54!76;CL:0000839!1.69e-53!70;CL:0000860!8.43e-52!45;CL:0002087!2.77e-38!119;CL:0000738!4.09e-36!140;CL:0000763!2.84e-35!112;CL:0000049!2.84e-35!112;CL:0002031!8.90e-32!124;CL:0000037!1.70e-26!172;CL:0000566!1.70e-26!172;CL:0002032!3.89e-25!165;CL:0000837!3.89e-25!165;CL:0000988!6.87e-24!182;CL:0002393!5.79e-15!9;CL:0002397!5.79e-15!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.42e-61;39!CL:0000234;6.42e-61;39!CL:0000576;1.91e-56;48!CL:0000860;1.56e-50;33!CL:0002057;1.56e-50;33!CL:0000766;2.02e-38;69!CL:0000235;2.15e-26;6!CL:0000763;1.66e-19;100!CL:0002619;6.69e-15;3!CL:0000875;9.19e-15;3!CL:0002396;9.19e-15;3!CL:0000738;1.07e-14;136!CL:0002087;4.74e-14;104!CL:0002393;3.74e-12;6!CL:0002397;3.74e-12;6!CL:0000219;1.21e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.22e-108,59;CL:0000576,2.22e-108,59;CL:0000040,2.22e-108,59;CL:0000559,2.22e-108,59;CL:0002009,1.28e-104,61;CL:0000473,2.67e-103,48;CL:0000234,2.67e-103,48;CL:0000839,3.42e-96,66;CL:0000557,1.17e-94,67;CL:0000766,2.69e-92,72;CL:0000860,9.08e-80,42;CL:0002057,9.08e-80,42;CL:0000763,4.92e-59,108;CL:0000049,4.92e-59,108;CL:0002087,9.03e-58,115;CL:0000738,3.25e-50,136;CL:0002031,1.56e-49,120;CL:0000037,4.53e-39,168;CL:0002032,6.16e-37,161;CL:0000837,6.16e-37,161;CL:0000988,1.18e-36,177;CL:0000235,2.03e-26,6;CL:0002393,3.92e-24,9;CL:0002397,3.92e-24,9;CL:0000134,4.74e-16,354;CL:0002320,1.45e-15,361;CL:0002619,6.87e-15,3;CL:0000875,9.02e-15,3;CL:0002396,9.02e-15,3;CL:0000219,7.43e-14,386;CL:0000048,9.23e-12,427;CL:0000723,1.80e-11,433;CL:0000034,4.25e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.32e-59;42!CL:0000049;4.99e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-51!102;UBERON:0003061!2.22e-51!102;UBERON:0002193!3.35e-48!112;UBERON:0002371!1.33e-46!80;UBERON:0001474!4.22e-42!86;UBERON:0002405!5.05e-35!115;UBERON:0004765!1.26e-34!101;UBERON:0001434!1.26e-34!101;UBERON:0003081!1.02e-18!216;UBERON:0002204!2.62e-17!167;UBERON:0007023!1.35e-10!115;UBERON:0000062!8.07e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-82,76;UBERON:0002390,1.94e-76,98;UBERON:0003061,1.94e-76,98;UBERON:0001474,4.77e-76,82;UBERON:0002405,9.08e-70,93;UBERON:0002193,1.22e-68,108;UBERON:0004765,1.25e-68,90;UBERON:0001434,5.25e-61,100;UBERON:0002204,2.60e-33,167;UBERON:0003081,1.24e-32,203;UBERON:0000926,6.28e-18,315;UBERON:0004120,6.28e-18,315;UBERON:0006603,6.28e-18,315;UBERON:0002384,6.66e-15,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,1.54816123316076,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.217010870715852,9.40444991807682,5.18229865630367,7.46969146139141,2.18097358169347,1.13362783106643,2.18325655069035,1.39457422143411,0,1.54853185447552,2.3015391385772,1.5369642391746,0.945928919554341,1.72372840368309,2.5819387343353,5.41705946377367,1.69418105588344,1.09162460023138,2.24723484445085,1.53041946185451,0.962787081228281,0,1.31940520074686,0.997318288108159,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,2.26123798731069,1.0429658368404,1.95469960234605,1.21079900526674,1.84138817993782,1.26584954976354,3.80259515361495,4.67729459923096,3.98351426465914,0.898629049171961,0.901061357049038,0.964353520182481,6.27028036230747,6.76316702476906,4.74926799788048,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,2.27183175558278,1.0447784237956,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43190610957315,3.7440682422278,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,1.03384013061444,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.455324382702595,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,1.4097587696978,0.45120521581504,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0.0645889098360061,0.372448285775147,0,0.0636471582781649,0,0.217716747896961,0,0.202056159043763,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@SH3BGRL | |||
}} | |||
Revision as of 06:12, 23 January 2014
| Short description: | p8@SH3BGRL |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_SH3BGRL_5end |
| Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
| Association with transcript: | 85bp_to_uc010nmn.2_5end |
| EntrezGene: | SH3BGRL |
| HGNC: | 10823 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.27e-82 | 76 |
| hematopoietic system | 1.94e-76 | 98 |
| blood island | 1.94e-76 | 98 |
| bone element | 4.77e-76 | 82 |
| immune system | 9.08e-70 | 93 |
| hemolymphoid system | 1.22e-68 | 108 |
| skeletal element | 1.25e-68 | 90 |
| skeletal system | 5.25e-61 | 100 |
| musculoskeletal system | 2.60e-33 | 167 |
| lateral plate mesoderm | 1.24e-32 | 203 |
| mesoderm | 6.28e-18 | 315 |
| mesoderm-derived structure | 6.28e-18 | 315 |
| presumptive mesoderm | 6.28e-18 | 315 |
| connective tissue | 6.66e-15 | 371 |
