FFCP PHASE1:Hg19::chr1:161188022..161188042,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:161188022..161188042,+ | |||
|coexpression_cluster_id=C143 | |coexpression_cluster_id=C143 | ||
|description=CAGE_peak_at_chr1:161188022..161188042,+ | |description=CAGE_peak_at_chr1:161188022..161188042,+ | ||
Latest revision as of 23:34, 27 July 2015
| Short description: | p@chr1:161188022..161188042, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:161188022..161188042, + |
| Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr1:161188022..161188042+ |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.17e-141 | 48 |
| phagocyte | 1.17e-141 | 48 |
| monopoietic cell | 2.98e-117 | 59 |
| monocyte | 2.98e-117 | 59 |
| monoblast | 2.98e-117 | 59 |
| promonocyte | 2.98e-117 | 59 |
| classical monocyte | 1.04e-116 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.04e-116 | 42 |
| macrophage dendritic cell progenitor | 3.41e-113 | 61 |
| myeloid lineage restricted progenitor cell | 4.17e-104 | 66 |
Showing 1 to 10 of 32 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.81e-89 | 76 |
| bone element | 2.23e-82 | 82 |
| immune system | 1.49e-75 | 93 |
| skeletal element | 2.24e-74 | 90 |
| hematopoietic system | 3.20e-71 | 98 |
| blood island | 3.20e-71 | 98 |
| hemolymphoid system | 2.89e-67 | 108 |
| skeletal system | 3.73e-66 | 100 |
| musculoskeletal system | 2.77e-36 | 167 |
| lateral plate mesoderm | 1.01e-31 | 203 |
Showing 1 to 10 of 14 entries
