FFCP PHASE1:Mm9::chr7:13563183..13563249,+: Difference between revisions
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{{FFCP|EntrezGene=269870|HGNC=|UniProt=Q8C9M8,E9Q6F9,Q149D4,E9Q6F7,Q3UQ55,Q80Y64|association_with_transcript=0bp_to_ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108537,ENSMUST00000108538,ENSMUST00000147996,NM_001168561,NM_001168562,NM_175558,uc009fet.2,uc009feu.2,uc009fev.2,uc009few.1,uc009fex.2_5end|description=CAGE_peak_1_at_Zfp446_5end|id=chr7:13563183..13563249,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.23e-14!94;UBERON:0000033!5.57e-14!63;UBERON:0007811!2.31e-12!86;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0003056!5.33e-11!49;UBERON:0004121!4.39e-10!102;UBERON:0000924!4.39e-10!102;UBERON:0006601!4.39e-10!102;UBERON:0000475!5.14e-10!200;UBERON:0001049!5.67e-10!52;UBERON:0005068!5.67e-10!52;UBERON:0006241!5.67e-10!52;UBERON:0007135!5.67e-10!52;UBERON:0000955!1.25e-08!50;UBERON:0006238!1.25e-08!50;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0002616!4.21e-08!49;UBERON:0000073!1.31e-07!75;UBERON:0001016!1.31e-07!75;UBERON:0000020!2.46e-07!12;UBERON:0001032!2.46e-07!12;UBERON:0004456!2.46e-07!12;UBERON:0003080!3.70e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.73e-12,64;UBERON:0003075,2.73e-12,64;UBERON:0007284,2.73e-12,64;UBERON:0010371,5.37e-12,73;UBERON:0003056,5.33e-11,49;UBERON:0004121,2.35e-10,95;UBERON:0000924,2.35e-10,95;UBERON:0006601,2.35e-10,95;UBERON:0001049,5.66e-10,52;UBERON:0005068,5.66e-10,52;UBERON:0006241,5.66e-10,52;UBERON:0007135,5.66e-10,52;UBERON:0010314,2.02e-09,92;UBERON:0000073,3.63e-09,54;UBERON:0000955,3.77e-09,47;UBERON:0006238,3.77e-09,47;UBERON:0002616,1.34e-08,46;UBERON:0001017,1.73e-08,73;UBERON:0001016,1.31e-07,75;UBERON:0000020,2.46e-07,12;UBERON:0001032,2.46e-07,12;UBERON:0004456,2.46e-07,12;UBERON:0003080,3.70e-07,40;UBERON:0000033,6.38e-07,13|phase1_expression=12.9720566154883,1.39590163055744,0.909998478779072,0.60492842261366,0,3.86122325397347,2.10251376535973,7.618276083053,0.985521055061667,2.57470978954193,5.13653904676515,4.70655738072485,6.16322627752341,7.95525662012876,4.99664642723494,2.63217847606774,2.79824751251259,7.41336088591859,6.17014951225825,8.48779303596061,6.37824676133023,4.86525660884338,6.52999472847338,0.95995453676044,2.06468352960453,1.72269589234506,0.86152399231815,1.72376986148711,1.14014051673824,1.51218077855958,1.33038306393183,10.1604907753541,16.6067492647834,0,4.33277429626912,2.32728503501889,2.6542016314108,0.418531630736908,1.5626706890476,0,3.52938892818609,0,0,4.65818226509636,3.54819259268301,2.56965453026354,7.82391344348039,5.23260375313072,3.29529274101708,5.63846707315422,3.49966054063406,11.5002051491977,3.52343472721246,4.35217285206807,3.36093799142464,5.65970759279083,3.72493471920384,3.09403255366465,10.7227724255587,8.99284664762456,8.23980824558033,1.0165335962074,3.55717918444456,1.7997994345628,4.94433181283487,3.5524005747305,7.78960287347852,6.91592949578798,3.7328260431052,7.2903206699113,6.09942387919008,9.14083150092171,9.05561017901615,6.1245399607477,6.03826467414889,8.27296907949019,6.60695285996332,4.72443150915195,5.06901559745603,11.8697658957174,10.1551284398675,11.4600941522487,8.37548997004143,9.56696437053856,7.94550888439413,7.66034322231536,5.12538050876771,7.64237727883732,2.49896437999507,3.70300644523249,8.69593466105033,4.30211938490693,1.3599426674155,3.2382191498269,8.4470934268197,4.03224198387602,3.93244376368905,3.91989741929533,2.33807404142582,3.18005617059306,10.140726223921,3.84979432242953,5.09610479413291,7.11066703153331,2.81438353314578,2.78695852022608,4.04419556011827,3.08296475241462,6.47344709117929,8.16431764856536,4.68410382268567,3.95805121805784,5.99600292865752,7.83757730873637,5.05631440683531,5.27799683584637,1.48316980640624,5.78397427679647,1.76922110389975,4.85300549842228,3.97514733228708,4.84875253135222,3.72783522436244,16.9812862266697,13.6140359428746,2.81002760729451,5.99075622529601,1.79970819298022,4.70159840170339,12.7322043494099,11.4375150704657,8.29318723944905,5.73620256634512,7.16003280524926,8.10373373782284,11.1946471516753,7.33243419722277,4.97627882440372,8.59257378674494,10.1012090825508,8.71806967850115,8.04657365517155,8.28285797104606,7.83665052745718,10.9538763633638,12.0426897067759,11.8064172945258,18.8853460639481,9.05385570317937,8.32066752738405,7.9178005873777,6.79506770525482,10.2877482213471,7.66154766348766,5.35033554660653,5.17489093728082,2.80885274925294,2.83082697826187,3.6941254921427,3.72826390563903,5.62862543954631,3.6012412292203,4.26140524053378,6.09969118416952,5.55361606394562,5.58081467400979,5.36546802799238,5.25444040652263,5.10135534731789,4.10418660197738,5.6748166682099,5.84799949701329,3.73235195994786,6.57611451925822,8.83217783969334,7.82075054082562,3.63460661282178,2.3800550999719,9.59797127408553,5.57368012465052,5.92790322081629,5.84882221407693,5.11469500843202,5.32631753115166,4.74529061544512,1.8116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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269870 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C9M8,uniprot:E9Q6F9,uniprot:Q149D4,uniprot:E9Q6F7,uniprot:Q3UQ55,uniprot:Q80Y64 | |||
|association_with_transcript=0bp_to_ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108537,ENSMUST00000108538,ENSMUST00000147996,NM_001168561,NM_001168562,NM_175558,uc009fet.2,uc009feu.2,uc009fev.2,uc009few.1,uc009fex.2_5end | |||
|cluster_id=chr7:13563183..13563249,+ | |||
|description=CAGE_peak_1_at_Zfp446_5end | |||
|id=chr7:13563183..13563249,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.23e-14!94;UBERON:0000033!5.57e-14!63;UBERON:0007811!2.31e-12!86;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0003056!5.33e-11!49;UBERON:0004121!4.39e-10!102;UBERON:0000924!4.39e-10!102;UBERON:0006601!4.39e-10!102;UBERON:0000475!5.14e-10!200;UBERON:0001049!5.67e-10!52;UBERON:0005068!5.67e-10!52;UBERON:0006241!5.67e-10!52;UBERON:0007135!5.67e-10!52;UBERON:0000955!1.25e-08!50;UBERON:0006238!1.25e-08!50;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0002616!4.21e-08!49;UBERON:0000073!1.31e-07!75;UBERON:0001016!1.31e-07!75;UBERON:0000020!2.46e-07!12;UBERON:0001032!2.46e-07!12;UBERON:0004456!2.46e-07!12;UBERON:0003080!3.70e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.73e-12,64;UBERON:0003075,2.73e-12,64;UBERON:0007284,2.73e-12,64;UBERON:0010371,5.37e-12,73;UBERON:0003056,5.33e-11,49;UBERON:0004121,2.35e-10,95;UBERON:0000924,2.35e-10,95;UBERON:0006601,2.35e-10,95;UBERON:0001049,5.66e-10,52;UBERON:0005068,5.66e-10,52;UBERON:0006241,5.66e-10,52;UBERON:0007135,5.66e-10,52;UBERON:0010314,2.02e-09,92;UBERON:0000073,3.63e-09,54;UBERON:0000955,3.77e-09,47;UBERON:0006238,3.77e-09,47;UBERON:0002616,1.34e-08,46;UBERON:0001017,1.73e-08,73;UBERON:0001016,1.31e-07,75;UBERON:0000020,2.46e-07,12;UBERON:0001032,2.46e-07,12;UBERON:0004456,2.46e-07,12;UBERON:0003080,3.70e-07,40;UBERON:0000033,6.38e-07,13 | |||
|phase1_expression=12.9720566154883,1.39590163055744,0.909998478779072,0.60492842261366,0,3.86122325397347,2.10251376535973,7.618276083053,0.985521055061667,2.57470978954193,5.13653904676515,4.70655738072485,6.16322627752341,7.95525662012876,4.99664642723494,2.63217847606774,2.79824751251259,7.41336088591859,6.17014951225825,8.48779303596061,6.37824676133023,4.86525660884338,6.52999472847338,0.95995453676044,2.06468352960453,1.72269589234506,0.86152399231815,1.72376986148711,1.14014051673824,1.51218077855958,1.33038306393183,10.1604907753541,16.6067492647834,0,4.33277429626912,2.32728503501889,2.6542016314108,0.418531630736908,1.5626706890476,0,3.52938892818609,0,0,4.65818226509636,3.54819259268301,2.56965453026354,7.82391344348039,5.23260375313072,3.29529274101708,5.63846707315422,3.49966054063406,11.5002051491977,3.52343472721246,4.35217285206807,3.36093799142464,5.65970759279083,3.72493471920384,3.09403255366465,10.7227724255587,8.99284664762456,8.23980824558033,1.0165335962074,3.55717918444456,1.7997994345628,4.94433181283487,3.5524005747305,7.78960287347852,6.91592949578798,3.7328260431052,7.2903206699113,6.09942387919008,9.14083150092171,9.05561017901615,6.1245399607477,6.03826467414889,8.27296907949019,6.60695285996332,4.72443150915195,5.06901559745603,11.8697658957174,10.1551284398675,11.4600941522487,8.37548997004143,9.56696437053856,7.94550888439413,7.66034322231536,5.12538050876771,7.64237727883732,2.49896437999507,3.70300644523249,8.69593466105033,4.30211938490693,1.3599426674155,3.2382191498269,8.4470934268197,4.03224198387602,3.93244376368905,3.91989741929533,2.33807404142582,3.18005617059306,10.140726223921,3.84979432242953,5.09610479413291,7.11066703153331,2.81438353314578,2.78695852022608,4.04419556011827,3.08296475241462,6.47344709117929,8.16431764856536,4.68410382268567,3.95805121805784,5.99600292865752,7.83757730873637,5.05631440683531,5.27799683584637,1.48316980640624,5.78397427679647,1.76922110389975,4.85300549842228,3.97514733228708,4.84875253135222,3.72783522436244,16.9812862266697,13.6140359428746,2.81002760729451,5.99075622529601,1.79970819298022,4.70159840170339,12.7322043494099,11.4375150704657,8.29318723944905,5.73620256634512,7.16003280524926,8.10373373782284,11.1946471516753,7.33243419722277,4.97627882440372,8.59257378674494,10.1012090825508,8.71806967850115,8.04657365517155,8.28285797104606,7.83665052745718,10.9538763633638,12.0426897067759,11.8064172945258,18.8853460639481,9.05385570317937,8.32066752738405,7.9178005873777,6.79506770525482,10.2877482213471,7.66154766348766,5.35033554660653,5.17489093728082,2.80885274925294,2.83082697826187,3.6941254921427,3.72826390563903,5.62862543954631,3.6012412292203,4.26140524053378,6.09969118416952,5.55361606394562,5.58081467400979,5.36546802799238,5.25444040652263,5.10135534731789,4.10418660197738,5.6748166682099,5.84799949701329,3.73235195994786,6.57611451925822,8.83217783969334,7.82075054082562,3.63460661282178,2.3800550999719,9.59797127408553,5.57368012465052,5.92790322081629,5.84882221407693,5.11469500843202,5.32631753115166,4.74529061544512,1.81168850196412,3.01602250560323,4.77495532898762,3.50935356814416,0.898819408654221,2.80979464837102,3.38540164532424,9.48339504765408,7.31190480702264,11.270773567308,7.127796474586,6.98228953803453,6.0316805105674,7.90456714053216,6.7900668070617,5.80895293013087,5.18268088471562,2.96452627087149,4.67166296005063,7.86235980452812,6.2961391467759,5.07150303471257,6.51178331331525,5.0925170356284,4.89083433666378,2.59416362840057,3.29473695825698,4.31304619582064,4.46569137202204,4.05648975048929,4.04126204715379,5.20252499213545,4.82443521363367,8.49864674766381,7.95863929436036,8.96307370431142,7.46878377410828,7.51008794523207,10.3853879613926,7.85544014923845,6.43941037930736,5.99013547603526,5.3151525515706,7.17546458958692,6.71839590334526,6.73471429276993,6.36455857758651,3.01582567878545,2.71952841909355,5.90117127622843,5.24279817978992,8.18808008937739,6.44664276257117,3.93443868904021,4.54447668967871,3.47059041357882,3.12350995437311,4.30846795465598,5.01834475700359,4.45597348164788,3.96307143104365,2.83367491172426,4.09158201075837,4.74345333535828,19.6006003017302,8.65834519770439,8.54714897602825,4.39794790254655,11.2179683621324,2.65490276679926,5.58395463156457,7.55808892411878,7.54420319023592,5.02013217897314,5.53383266299069,7.23599220871019,5.08947221268508,4.9909632973861,4.74055136903724,2.10837217149998,7.21948802737308,11.5749465956288,7.92268813737765,11.7716402242307,8.14480733120051,8.51233121482913,8.38333442729732,9.87294123612726,17.3545020995322,1.64270195644597,3.1774810629573,7.27743713581374,5.44124634706884,3.22928853391811,4.82503399425247,6.32673423216623,5.74493149107714,5.24665505933731,7.97328798645192,4.95525554313773,7.84270098260245,5.37064129372164,5.08594833912666,5.33107488111998,5.0331198105435,5.60928818979723,5.73800954526998,3.86959926652387,7.63736494412091,7.43389584915668,7.1161813494397,3.78018692876304,6.89991376847747,4.36725127492355,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| |||
|short_description=p1@Zfp446 | |||
}} |
Revision as of 08:26, 4 August 2015
Short description: | p1@Zfp446 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp446_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000045810, ENSMUST00000108535, ENSMUST00000108537, ENSMUST00000108538, ENSMUST00000147996, NM_001168561, NM_001168562, NM_175558, uc009fet.2, uc009feu.2, uc009fev.2, uc009few.1, uc009fex.2_5end |
EntrezGene: | 269870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.73e-12 | 64 |
neural plate | 2.73e-12 | 64 |
presumptive neural plate | 2.73e-12 | 64 |
ecto-epithelium | 5.37e-12 | 73 |
pre-chordal neural plate | 5.33e-11 | 49 |
ectoderm-derived structure | 2.35e-10 | 95 |
ectoderm | 2.35e-10 | 95 |
presumptive ectoderm | 2.35e-10 | 95 |
neural tube | 5.66e-10 | 52 |
neural rod | 5.66e-10 | 52 |
future spinal cord | 5.66e-10 | 52 |
neural keel | 5.66e-10 | 52 |
structure with developmental contribution from neural crest | 2.02e-09 | 92 |
regional part of nervous system | 3.63e-09 | 54 |
brain | 3.77e-09 | 47 |
future brain | 3.77e-09 | 47 |
regional part of brain | 1.34e-08 | 46 |
central nervous system | 1.73e-08 | 73 |
nervous system | 1.31e-07 | 75 |
sense organ | 2.46e-07 | 12 |
sensory system | 2.46e-07 | 12 |
entire sense organ system | 2.46e-07 | 12 |
anterior neural tube | 3.70e-07 | 40 |
head | 6.38e-07 | 13 |