FFCP PHASE1:Mm9::chr1:137744333..137744352,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=19|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137744333..137744352,-|id=chr1:137744333..137744352,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.31e-30!18;UBERON:0000948!4.31e-30!18;UBERON:0005498!4.31e-30!18;UBERON:0004140!4.31e-30!18;UBERON:0009881!4.31e-30!18;UBERON:0004141!4.31e-30!18;UBERON:0003084!4.31e-30!18;UBERON:0007005!4.31e-30!18;UBERON:0004139!4.31e-30!18;UBERON:0004291!4.31e-30!18;UBERON:0004535!2.68e-22!23;UBERON:0001009!2.68e-22!23;UBERON:0004872!7.41e-14!33;UBERON:0003103!4.22e-13!43;UBERON:0003914!2.88e-09!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.14e-77,18;UBERON:0000948,8.14e-77,18;UBERON:0005498,8.14e-77,18;UBERON:0004140,8.14e-77,18;UBERON:0009881,8.14e-77,18;UBERON:0004141,8.14e-77,18;UBERON:0003084,8.14e-77,18;UBERON:0007005,8.14e-77,18;UBERON:0004139,8.14e-77,18;UBERON:0004291,8.14e-77,18;UBERON:0004535,8.52e-60,23;UBERON:0001009,8.52e-60,23;UBERON:0004872,3.31e-41,33;UBERON:0003103,3.03e-31,43;UBERON:0003914,1.92e-28,47;UBERON:0003081,1.51e-14,87;UBERON:0010314,1.18e-13,92;UBERON:0000025,1.20e-10,114;UBERON:0000926,5.14e-10,120;UBERON:0004120,5.14e-10,120;UBERON:0006603,5.14e-10,120;UBERON:0004111,8.09e-10,122;UBERON:0001048,9.29e-09,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86413195281952,4.92504725960302,5.94204802821349,2.60419209143731,6.29645541591692,7.0962871928194,8.37122201101468,9.12129564758705,7.35621656913168,7.40519324610662,7.22336841948019,6.56657357321431,14.1813987802572,7.02560368931362,7.64976586934119,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0,0.565879024158229,0.37456602987953,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.382576664137687,0,0|short_description=p@chr1:137744333..137744352,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:137744333..137744352,- | |||
|description=CAGE_peak_at_chr1:137744333..137744352,- | |||
|id=chr1:137744333..137744352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.31e-30!18;UBERON:0000948!4.31e-30!18;UBERON:0005498!4.31e-30!18;UBERON:0004140!4.31e-30!18;UBERON:0009881!4.31e-30!18;UBERON:0004141!4.31e-30!18;UBERON:0003084!4.31e-30!18;UBERON:0007005!4.31e-30!18;UBERON:0004139!4.31e-30!18;UBERON:0004291!4.31e-30!18;UBERON:0004535!2.68e-22!23;UBERON:0001009!2.68e-22!23;UBERON:0004872!7.41e-14!33;UBERON:0003103!4.22e-13!43;UBERON:0003914!2.88e-09!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.14e-77,18;UBERON:0000948,8.14e-77,18;UBERON:0005498,8.14e-77,18;UBERON:0004140,8.14e-77,18;UBERON:0009881,8.14e-77,18;UBERON:0004141,8.14e-77,18;UBERON:0003084,8.14e-77,18;UBERON:0007005,8.14e-77,18;UBERON:0004139,8.14e-77,18;UBERON:0004291,8.14e-77,18;UBERON:0004535,8.52e-60,23;UBERON:0001009,8.52e-60,23;UBERON:0004872,3.31e-41,33;UBERON:0003103,3.03e-31,43;UBERON:0003914,1.92e-28,47;UBERON:0003081,1.51e-14,87;UBERON:0010314,1.18e-13,92;UBERON:0000025,1.20e-10,114;UBERON:0000926,5.14e-10,120;UBERON:0004120,5.14e-10,120;UBERON:0006603,5.14e-10,120;UBERON:0004111,8.09e-10,122;UBERON:0001048,9.29e-09,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86413195281952,4.92504725960302,5.94204802821349,2.60419209143731,6.29645541591692,7.0962871928194,8.37122201101468,9.12129564758705,7.35621656913168,7.40519324610662,7.22336841948019,6.56657357321431,14.1813987802572,7.02560368931362,7.64976586934119,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0,0.565879024158229,0.37456602987953,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr1:137744333..137744352,- | |||
}} | |||
Latest revision as of 21:13, 4 August 2015
| Short description: | p@chr1:137744333..137744352, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:137744333..137744352, - |
| Coexpression cluster: | MCL_coexpression_mm9:19 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 8.14e-77 | 18 |
| heart | 8.14e-77 | 18 |
| primitive heart tube | 8.14e-77 | 18 |
| primary heart field | 8.14e-77 | 18 |
| anterior lateral plate mesoderm | 8.14e-77 | 18 |
| heart tube | 8.14e-77 | 18 |
| heart primordium | 8.14e-77 | 18 |
| cardiac mesoderm | 8.14e-77 | 18 |
| cardiogenic plate | 8.14e-77 | 18 |
| heart rudiment | 8.14e-77 | 18 |
| cardiovascular system | 8.52e-60 | 23 |
| circulatory system | 8.52e-60 | 23 |
| splanchnic layer of lateral plate mesoderm | 3.31e-41 | 33 |
| compound organ | 3.03e-31 | 43 |
| epithelial tube | 1.92e-28 | 47 |
| lateral plate mesoderm | 1.51e-14 | 87 |
| structure with developmental contribution from neural crest | 1.18e-13 | 92 |
| tube | 1.20e-10 | 114 |
| mesoderm | 5.14e-10 | 120 |
| mesoderm-derived structure | 5.14e-10 | 120 |
| presumptive mesoderm | 5.14e-10 | 120 |
| anatomical conduit | 8.09e-10 | 122 |
| primordium | 9.29e-09 | 134 |