FFCP PHASE1:Mm9::chr10:83903281..83903292,-: Difference between revisions
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{{FFCP|EntrezGene=77976|HGNC=|MCL_coexpression_id=52|UniProt=Q641K5|association_with_transcript=49bp_to_ENSMUST00000020220_5end|description=CAGE_peak_5_at_Nuak1_5end|id=chr10:83903281..83903292,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!6.97e-14!114;UBERON:0004111!1.07e-12!122;UBERON:0004535!2.99e-09!23;UBERON:0001009!2.99e-09!23;UBERON:0001049!1.71e-08!52;UBERON:0005068!1.71e-08!52;UBERON:0006241!1.71e-08!52;UBERON:0007135!1.71e-08!52;UBERON:0007100!2.07e-08!18;UBERON:0000948!2.07e-08!18;UBERON:0005498!2.07e-08!18;UBERON:0004140!2.07e-08!18;UBERON:0009881!2.07e-08!18;UBERON:0004141!2.07e-08!18;UBERON:0003084!2.07e-08!18;UBERON:0007005!2.07e-08!18;UBERON:0004139!2.07e-08!18;UBERON:0004291!2.07e-08!18;UBERON:0002616!5.85e-08!49;UBERON:0000468!6.20e-08!333;UBERON:0002020!6.75e-08!34;UBERON:0000955!6.91e-08!50;UBERON:0006238!6.91e-08!50;UBERON:0001017!2.06e-07!73;UBERON:0005743!2.06e-07!73;UBERON:0000033!2.87e-07!63;UBERON:0002346!3.13e-07!71;UBERON:0003075!3.13e-07!71;UBERON:0007284!3.13e-07!71;UBERON:0002791!4.35e-07!29;UBERON:0003528!4.35e-07!29;UBERON:0001893!4.35e-07!29;UBERON:0000073!5.90e-07!75;UBERON:0001016!5.90e-07!75;UBERON:0003103!6.31e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.04e-13,114;UBERON:0004111,7.34e-11,122;UBERON:0010314,2.23e-10,92;UBERON:0004535,9.37e-10,23;UBERON:0001009,9.37e-10,23;UBERON:0007100,4.88e-09,18;UBERON:0000948,4.88e-09,18;UBERON:0005498,4.88e-09,18;UBERON:0004140,4.88e-09,18;UBERON:0009881,4.88e-09,18;UBERON:0004141,4.88e-09,18;UBERON:0003084,4.88e-09,18;UBERON:0007005,4.88e-09,18;UBERON:0004139,4.88e-09,18;UBERON:0004291,4.88e-09,18;UBERON:0000073,8.41e-08,54;UBERON:0001049,1.98e-07,52;UBERON:0005068,1.98e-07,52;UBERON:0006241,1.98e-07,52;UBERON:0007135,1.98e-07,52;UBERON:0002020,5.36e-07,34;UBERON:0002346,8.33e-07,64;UBERON:0003075,8.33e-07,64;UBERON:0007284,8.33e-07,64|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0.935476191661768,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,2.12891555560981,0.550640256485045,0,1.96222640742402,5.05278220289285,2.72201858703997,0.979904951377538,1.43752564364972,0,0,0,4.3734104126111,3.43840127926508,4.12537673821954,2.22548106945558,3.1739458756322,1.26766280701236,0.338844532069132,0,1.7997994345628,0,0.7104801149461,2.39680088414724,1.53687322128622,1.34796496001021,1.21505344498522,1.05162480675691,2.28520787523043,1.32521124570968,0.734944795289724,0.383381884072945,1.83843757322004,2.20231761998777,1.91531007127782,1.38245879930619,3.03338461779446,3.11057988248193,4.16730696445408,2.51264699101243,0.56276261003168,2.75036845998258,1.47314292736834,1.85083185038834,1.3047961207771,0.605809546665472,0.226714680320357,4.34796733052517,0.860423876981386,0,0,1.29955283489534,0,0.421333260395256,2.55645483867087,2.07828803682295,1.06001872353102,0.845060518660083,5.13305909657271,10.1922095882658,28.4426681261332,0.865964164044856,0.253359865475099,2.02209778005913,0.22836775943812,0,1.03909497345377,0.346970653532272,0.913396434936424,0.691846491768175,1.05505848386836,0.705532242814229,0.376999773989026,0.741584903203122,1.73519228303894,1.76922110389975,1.94120219936891,2.20841518460394,0.484875253135222,0,2.92780797011547,2.93225389538837,0,0,0,0,1.64769703345305,0.915001205637253,0.628271760564322,6.25767552692195,4.60287823194595,1.66230435647648,1.94689515681309,1.62942982160506,1.36847667671102,0.252722758433675,0.420883711772948,1.43132487258974,1.83921683546778,1.26043490863744,1.05493372485001,1.2246569847239,1.15302348256365,1.03071897015702,1.81092359517311,0.215567992932842,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,1.74126083261083,1.4404749548556,0.59710280045548,0,0,0,0.828503090142008,1.40715635988658,1.80062061461015,1.89395788468168,1.18058539048442,2.77680803197281,3.48800917125612,5.90201483079162,3.85325629811659,2.96207729844265,3.77585167381919,5.51267904911819,4.9707995724613,2.41505126820156,4.2946054003319,1.47202963994889,1.13195073617213,0.330418782983798,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0,0.823494773620054,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,1.13800740571849,1.37098215131675,0,0.610953983535943,1.35766741017338,1.40271639780637,1.64414996523069,1.03327103585722,0.941992367048249,1.1105744752962,0.592905254174298,0.333690211432188,0.589676985339609,0,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0.372140947668503,1.24815069245824,0.757736633841335,0.358794827043824,1.92977408545347,2.40179147216586,1.51593129416388,0.651859905768103,1.01847051465113,1.17345124144251,2.68010011906905,2.61848004974615,5.6588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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77976 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q641K5 | |||
|association_with_transcript=49bp_to_ENSMUST00000020220_5end | |||
|cluster_id=chr10:83903281..83903292,- | |||
|description=CAGE_peak_5_at_Nuak1_5end | |||
|id=chr10:83903281..83903292,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!6.97e-14!114;UBERON:0004111!1.07e-12!122;UBERON:0004535!2.99e-09!23;UBERON:0001009!2.99e-09!23;UBERON:0001049!1.71e-08!52;UBERON:0005068!1.71e-08!52;UBERON:0006241!1.71e-08!52;UBERON:0007135!1.71e-08!52;UBERON:0007100!2.07e-08!18;UBERON:0000948!2.07e-08!18;UBERON:0005498!2.07e-08!18;UBERON:0004140!2.07e-08!18;UBERON:0009881!2.07e-08!18;UBERON:0004141!2.07e-08!18;UBERON:0003084!2.07e-08!18;UBERON:0007005!2.07e-08!18;UBERON:0004139!2.07e-08!18;UBERON:0004291!2.07e-08!18;UBERON:0002616!5.85e-08!49;UBERON:0000468!6.20e-08!333;UBERON:0002020!6.75e-08!34;UBERON:0000955!6.91e-08!50;UBERON:0006238!6.91e-08!50;UBERON:0001017!2.06e-07!73;UBERON:0005743!2.06e-07!73;UBERON:0000033!2.87e-07!63;UBERON:0002346!3.13e-07!71;UBERON:0003075!3.13e-07!71;UBERON:0007284!3.13e-07!71;UBERON:0002791!4.35e-07!29;UBERON:0003528!4.35e-07!29;UBERON:0001893!4.35e-07!29;UBERON:0000073!5.90e-07!75;UBERON:0001016!5.90e-07!75;UBERON:0003103!6.31e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.04e-13,114;UBERON:0004111,7.34e-11,122;UBERON:0010314,2.23e-10,92;UBERON:0004535,9.37e-10,23;UBERON:0001009,9.37e-10,23;UBERON:0007100,4.88e-09,18;UBERON:0000948,4.88e-09,18;UBERON:0005498,4.88e-09,18;UBERON:0004140,4.88e-09,18;UBERON:0009881,4.88e-09,18;UBERON:0004141,4.88e-09,18;UBERON:0003084,4.88e-09,18;UBERON:0007005,4.88e-09,18;UBERON:0004139,4.88e-09,18;UBERON:0004291,4.88e-09,18;UBERON:0000073,8.41e-08,54;UBERON:0001049,1.98e-07,52;UBERON:0005068,1.98e-07,52;UBERON:0006241,1.98e-07,52;UBERON:0007135,1.98e-07,52;UBERON:0002020,5.36e-07,34;UBERON:0002346,8.33e-07,64;UBERON:0003075,8.33e-07,64;UBERON:0007284,8.33e-07,64 | |||
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| |||
|short_description=p5@Nuak1 | |||
}} |
Revision as of 22:24, 4 August 2015
Short description: | p5@Nuak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nuak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 49bp_to_ENSMUST00000020220_5end |
EntrezGene: | 77976 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 5.04e-13 | 114 |
anatomical conduit | 7.34e-11 | 122 |
structure with developmental contribution from neural crest | 2.23e-10 | 92 |
cardiovascular system | 9.37e-10 | 23 |
circulatory system | 9.37e-10 | 23 |
primary circulatory organ | 4.88e-09 | 18 |
heart | 4.88e-09 | 18 |
primitive heart tube | 4.88e-09 | 18 |
primary heart field | 4.88e-09 | 18 |
anterior lateral plate mesoderm | 4.88e-09 | 18 |
heart tube | 4.88e-09 | 18 |
heart primordium | 4.88e-09 | 18 |
cardiac mesoderm | 4.88e-09 | 18 |
cardiogenic plate | 4.88e-09 | 18 |
heart rudiment | 4.88e-09 | 18 |
regional part of nervous system | 8.41e-08 | 54 |
neural tube | 1.98e-07 | 52 |
neural rod | 1.98e-07 | 52 |
future spinal cord | 1.98e-07 | 52 |
neural keel | 1.98e-07 | 52 |
gray matter | 5.36e-07 | 34 |
neurectoderm | 8.33e-07 | 64 |
neural plate | 8.33e-07 | 64 |
presumptive neural plate | 8.33e-07 | 64 |