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FFCP PHASE1:Mm9::chr6:125095277..125095296,+: Difference between revisions

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{{FFCP|EntrezGene=320678|HGNC=|MCL_coexpression_id=1303|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141230_5end|description=CAGE_peak_3_at_Iffo1_5end|id=chr6:125095277..125095296,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.58e-14!73;UBERON:0005743!3.58e-14!73;UBERON:0000073!2.68e-13!75;UBERON:0001016!2.68e-13!75;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0002346!1.07e-09!71;UBERON:0003075!1.07e-09!71;UBERON:0007284!1.07e-09!71;UBERON:0001049!3.16e-08!52;UBERON:0005068!3.16e-08!52;UBERON:0006241!3.16e-08!52;UBERON:0007135!3.16e-08!52;UBERON:0000955!3.80e-08!50;UBERON:0006238!3.80e-08!50;UBERON:0000033!5.88e-08!63;UBERON:0002616!7.59e-08!49;UBERON:0002021!5.57e-07!10;UBERON:0000411!5.57e-07!10;UBERON:0001950!5.57e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-14,73;UBERON:0001016,2.73e-13,75;UBERON:0004121,1.50e-10,95;UBERON:0000924,1.50e-10,95;UBERON:0006601,1.50e-10,95;UBERON:0002346,1.75e-10,64;UBERON:0003075,1.75e-10,64;UBERON:0007284,1.75e-10,64;UBERON:0000073,5.86e-09,54;UBERON:0001049,3.19e-08,52;UBERON:0005068,3.19e-08,52;UBERON:0006241,3.19e-08,52;UBERON:0007135,3.19e-08,52;UBERON:0010314,3.82e-08,92;UBERON:0010371,1.03e-07,73;UBERON:0002021,4.70e-07,10;UBERON:0000411,4.70e-07,10;UBERON:0001950,4.70e-07,10;UBERON:0000955,5.81e-07,47;UBERON:0006238,5.81e-07,47|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.516493293766305,1.12630977721333,0.234064526321993,0.513653904676515,0.0797721589953364,0.513602189793617,0.262261207256992,0.999329285446988,0.809901069559304,4.89693314689703,1.41957974411207,1.37114433605739,1.27316895539409,4.93251082876205,3.77305614563364,4.96279599363977,0.47997726838022,0.22940928106717,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,1.67412652294763,1.5626706890476,0,1.17646297606203,1.36609096991689,0.485510353031154,2.26614272356039,2.02753862439029,2.56965453026354,3.9119567217402,4.57852828398938,1.97717564461025,3.11087838518853,3.07970127575798,4.31257693094915,1.00669563634642,2.17608642603403,0.336093799142464,3.08711323243136,3.15186783932632,3.09403255366465,1.61853168687678,4.7609188134483,1.90149421051854,5.76035704517525,1.77858959222228,0,3.9554654502679,2.1314403448383,4.79360176829448,6.14749288514487,1.24427534770173,1.35005938331691,0.420649922702764,10.2834354385369,6.62605622854841,0.61245399607477,0.383381884072945,2.75765635983006,9.91042928994498,8.93811366596314,8.1411462625809,1.84640802822271,1.9212405156506,1.56274011167028,8.09630697104005,6.75315132038016,4.43114918552749,5.30331453852602,5.55249555116501,2.05039390407831,0.530083353332288,1.5870027622425,1.15945795480671,0,0,0.539703191637817,0,1.34408066129201,0.983110940922263,1.87473354835864,1.55871602761721,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.91347103775248,3.6251303710604,2.82040064223167,2.4287945747259,3.34912026143355,0.922461989024234,1.20578112442098,3.52766121407114,1.50799909595611,1.23597483867187,1.87979163995885,1.76922110389975,7.60304194752823,3.3126227769059,1.93950101254089,0,7.31951992528868,7.54008144528438,1.02182822083437,1.91704199209472,2.39961092397363,2.28726408731516,8.08869452786043,8.6925114535539,3.01570445070875,11.9938780932671,14.0643501531682,15.584103341967,16.710850095979,1.93494791315601,1.8661045591514,0.252722758433675,1.47309299120532,2.99277018814219,2.5289231487682,4.68161537493908,4.21973489940002,6.05524842446818,6.14945857367279,4.68508622798644,7.76110112217047,1.72454394346274,6.99692496620931,5.80638709741031,8.98702502953057,6.39508673218875,8.00979983000983,3.08673204611915,1.99034266818493,0.702213187313235,3.08817488537658,2.27330799516474,1.65700618028402,0.938104239924385,2.16074473753218,2.3674473558521,2.55793501271625,1.23413690309903,1.86027155800326,3.48755421819505,3.26942958628075,1.31647879930784,2.46251196118643,3.24275238183423,2.33919979880532,2.63460138349261,2.41571553768669,11.565947171027,3.19004298375782,0,0,1.06644125267617,3.25131340604614,1.54640953586512,1.81515172161008,1.11189021922435,0.570676878337677,0,0.494096864172033,0.502670417600539,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,1.32767530667157,1.5994791765362,1.1270773567308,1.83286195060783,2.71533482034676,1.75339549725796,2.52946148497029,4.72352473534727,4.08196692387575,4.07210640941942,0.592905254174298,0.667380422864376,0.982794975566015,1.79889689907883,1.01430060694251,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,0.274561413188081,2.87536413054709,2.23284568601102,3.12037673114561,1.51547326768267,0.896987067609561,0.964887042726734,1.47802552133284,2.4633883530163,0.814824882210129,0.509235257325564,1.64283173801951,1.00503754465089,0.714130922658041,2.14647012643579,1.41871629695572,3.10050565508285,1.11618338060241,1.80249646187312,1.72684981865896,1.88043776155965,0,2.7195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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:320678
|HGNC=
|MCL_coexpression_id=1303
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000141230_5end
|cluster_id=chr6:125095277..125095296,+
|description=CAGE_peak_3_at_Iffo1_5end
|id=chr6:125095277..125095296,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-14,73;UBERON:0001016,2.73e-13,75;UBERON:0004121,1.50e-10,95;UBERON:0000924,1.50e-10,95;UBERON:0006601,1.50e-10,95;UBERON:0002346,1.75e-10,64;UBERON:0003075,1.75e-10,64;UBERON:0007284,1.75e-10,64;UBERON:0000073,5.86e-09,54;UBERON:0001049,3.19e-08,52;UBERON:0005068,3.19e-08,52;UBERON:0006241,3.19e-08,52;UBERON:0007135,3.19e-08,52;UBERON:0010314,3.82e-08,92;UBERON:0010371,1.03e-07,73;UBERON:0002021,4.70e-07,10;UBERON:0000411,4.70e-07,10;UBERON:0001950,4.70e-07,10;UBERON:0000955,5.81e-07,47;UBERON:0006238,5.81e-07,47
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.516493293766305,1.12630977721333,0.234064526321993,0.513653904676515,0.0797721589953364,0.513602189793617,0.262261207256992,0.999329285446988,0.809901069559304,4.89693314689703,1.41957974411207,1.37114433605739,1.27316895539409,4.93251082876205,3.77305614563364,4.96279599363977,0.47997726838022,0.22940928106717,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,1.67412652294763,1.5626706890476,0,1.17646297606203,1.36609096991689,0.485510353031154,2.26614272356039,2.02753862439029,2.56965453026354,3.9119567217402,4.57852828398938,1.97717564461025,3.11087838518853,3.07970127575798,4.31257693094915,1.00669563634642,2.17608642603403,0.336093799142464,3.08711323243136,3.15186783932632,3.09403255366465,1.61853168687678,4.7609188134483,1.90149421051854,5.76035704517525,1.77858959222228,0,3.9554654502679,2.1314403448383,4.79360176829448,6.14749288514487,1.24427534770173,1.35005938331691,0.420649922702764,10.2834354385369,6.62605622854841,0.61245399607477,0.383381884072945,2.75765635983006,9.91042928994498,8.93811366596314,8.1411462625809,1.84640802822271,1.9212405156506,1.56274011167028,8.09630697104005,6.75315132038016,4.43114918552749,5.30331453852602,5.55249555116501,2.05039390407831,0.530083353332288,1.5870027622425,1.15945795480671,0,0,0.539703191637817,0,1.34408066129201,0.983110940922263,1.87473354835864,1.55871602761721,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.91347103775248,3.6251303710604,2.82040064223167,2.4287945747259,3.34912026143355,0.922461989024234,1.20578112442098,3.52766121407114,1.50799909595611,1.23597483867187,1.87979163995885,1.76922110389975,7.60304194752823,3.3126227769059,1.93950101254089,0,7.31951992528868,7.54008144528438,1.02182822083437,1.91704199209472,2.39961092397363,2.28726408731516,8.08869452786043,8.6925114535539,3.01570445070875,11.9938780932671,14.0643501531682,15.584103341967,16.710850095979,1.93494791315601,1.8661045591514,0.252722758433675,1.47309299120532,2.99277018814219,2.5289231487682,4.68161537493908,4.21973489940002,6.05524842446818,6.14945857367279,4.68508622798644,7.76110112217047,1.72454394346274,6.99692496620931,5.80638709741031,8.98702502953057,6.39508673218875,8.00979983000983,3.08673204611915,1.99034266818493,0.702213187313235,3.08817488537658,2.27330799516474,1.65700618028402,0.938104239924385,2.16074473753218,2.3674473558521,2.55793501271625,1.23413690309903,1.86027155800326,3.48755421819505,3.26942958628075,1.31647879930784,2.46251196118643,3.24275238183423,2.33919979880532,2.63460138349261,2.41571553768669,11.565947171027,3.19004298375782,0,0,1.06644125267617,3.25131340604614,1.54640953586512,1.81515172161008,1.11189021922435,0.570676878337677,0,0.494096864172033,0.502670417600539,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,1.32767530667157,1.5994791765362,1.1270773567308,1.83286195060783,2.71533482034676,1.75339549725796,2.52946148497029,4.72352473534727,4.08196692387575,4.07210640941942,0.592905254174298,0.667380422864376,0.982794975566015,1.79889689907883,1.01430060694251,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,0.274561413188081,2.87536413054709,2.23284568601102,3.12037673114561,1.51547326768267,0.896987067609561,0.964887042726734,1.47802552133284,2.4633883530163,0.814824882210129,0.509235257325564,1.64283173801951,1.00503754465089,0.714130922658041,2.14647012643579,1.41871629695572,3.10050565508285,1.11618338060241,1.80249646187312,1.72684981865896,1.88043776155965,0,2.71952841909355,0,0.827810238914197,11.3990918891332,20.3948334670434,0.327869890753351,6.81671503451807,5.99465616890888,5.46614242015294,14.2179442503647,8.60287672629187,11.1399337041197,10.190755108398,12.1443210502468,12.5670018901864,14.2303600060748,7.06906896127976,1.84522110770749,1.42452482933804,1.46598263418218,1.48473110675282,1.32745138339963,1.45668381692989,1.209294227859,0.377210159511796,1.77181135728464,0.922305443831782,1.55056975900933,1.09060118843252,2.49548164869305,0.948110273807448,0,0,4.08527526904546,1.44048875225048,1.4229455216103,1.50035924522115,1.41872186913819,1.60531935841864,1.81003922662333,3.95804433848979,3.75474732901937,2.96564899209348,0.441056796109924,1.48397627647332,4.19807509409354,1.20625849856312,1.3130957840345,0,2.04036585640896,12.4234952347041,2.9048049735635,2.06386867963222,2.22233432843654,3.39063222608444,2.46049609897845,1.14389086603261,0.849892149969277,1.6794174278839,0.967399816630967,0,1.58167996790568,2.23651413839534,0.756037385752609,1.04544148007234,0.436725127492355,1.07891477107857,2.31429676030941,0,0.388844919875379,0.621339313086926,15.7834022831573,1.79419855252775,1.82004339502807,2.52786544847262,1.29159823477731,2.02747350588934,4.69428954583016,5.33837977860195,5.66240459898839,8.93861247056222,9.50499020650956,3.16011120628178,0.608175645870493,1.43795340030758,2.46849563657811,2.68540043501222,1.78813219303138,1.68273629327956,2.36303243479324,2.92802704849628,3.20068587950999,2.01652370273681,2.92373642219257,3.65604998233252,4.32444538071805,0.906921534460845,1.77588762699252,2.6017018416748,1.84673078000486,1.35232715822533,2.064507229963,0.549454872801795,0.857473516316263,0.501572104035363,14.1187960654267,12.4287813856938,13.7494923225455,16.497905504994,8.22099023724771,14.3524840504043,11.4753825039407,6.30449684513909,9.9691329976525,9.31968561153276,3.73634451303036,2.39414924040619,3.58540572083682,8.99494853152688,6.28839487883947,4.96377472815038,10.2233494788743,7.82933217507798,8.66481865897901,8.08631077644152,8.11133759648767,7.54505365544305,9.17686773204848,7.74704344098918,7.29430455736289,7.62069906052918,8.80720877180902,8.10218725947561,9.47797571847605,7.94874168725746,9.60033906679163,8.69631450180754,9.29901140794552,9.59286349773368,6.96409415073447,9.22299226019274,7.68297486065645,6.31367307450823,8.96307151382688,8.97827634652382,7.59264115994714,8.56988996667402,6.95692773388472,7.59190521811233,6.17301155139652,5.49583271463481,3.50897412668113,5.15690529715916,12.0511649203371,5.95596831622692,6.02856372613096
|short_description=p3@Iffo1
}}

Revision as of 04:00, 5 August 2015

Short description:p3@Iffo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Iffo1_5end
Coexpression cluster:MCL_coexpression_mm9:1303
Association with transcript: 0bp_to_ENSMUST00000141230_5end
EntrezGene:320678
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Iffo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B216.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A88.99
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D95.66
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C612.05
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B46.03





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.13e-1473
nervous system2.73e-1375
ectoderm-derived structure1.50e-1095
ectoderm1.50e-1095
presumptive ectoderm1.50e-1095
neurectoderm1.75e-1064
neural plate1.75e-1064
presumptive neural plate1.75e-1064
regional part of nervous system5.86e-0954
neural tube3.19e-0852
neural rod3.19e-0852
future spinal cord3.19e-0852
neural keel3.19e-0852
structure with developmental contribution from neural crest3.82e-0892
ecto-epithelium1.03e-0773
occipital lobe4.70e-0710
visual cortex4.70e-0710
neocortex4.70e-0710
brain5.81e-0747
future brain5.81e-0747
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