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FFCP PHASE1:Mm9::chr5:104182963..104182982,+: Difference between revisions

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{{FFCP|EntrezGene=17355|HGNC=|MCL_coexpression_id=4|UniProt=A3KMF4,Q3UP77,Q3UQD9|association_with_transcript=-198bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end|description=CAGE_peak_5_at_Aff1_5end|id=chr5:104182963..104182982,+|ontology_enrichment_celltype=CL:0000791!7.70e-07!9;CL:0000789!7.70e-07!9;CL:0002420!7.70e-07!9;CL:0002419!7.70e-07!9;CL:0000790!7.70e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,1.74e-07,9;CL:0000789,1.74e-07,9;CL:0002420,1.74e-07,9;CL:0002419,1.74e-07,9;CL:0000790,1.74e-07,9;CL:0000624,8.47e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.13e-12!29;UBERON:0002370!2.03e-10!23;UBERON:0000974!2.03e-10!23;UBERON:0004807!2.03e-10!23;UBERON:0005058!2.03e-10!23;UBERON:0003351!2.03e-10!23;UBERON:0009113!2.03e-10!23;UBERON:0003295!2.03e-10!23;UBERON:0009722!2.03e-10!23;UBERON:0005562!2.03e-10!23;UBERON:0007690!2.03e-10!23;UBERON:0006562!2.39e-10!24;UBERON:0001557!2.39e-10!24;UBERON:0001042!2.39e-10!24;UBERON:0008814!2.39e-10!24;UBERON:0009145!2.39e-10!24;UBERON:0003408!3.03e-10!24;UBERON:0002390!3.11e-10!45;UBERON:0003061!3.11e-10!45;UBERON:0002193!8.65e-10!48;UBERON:0003081!1.63e-08!88;UBERON:0000072!1.37e-07!27;UBERON:0005057!2.64e-07!51;UBERON:0002405!9.48e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.36e-15,29;UBERON:0005057,6.36e-15,29;UBERON:0007811,2.57e-13,36;UBERON:0000153,5.36e-13,43;UBERON:0002370,2.13e-12,23;UBERON:0000974,2.13e-12,23;UBERON:0004807,2.13e-12,23;UBERON:0005058,2.13e-12,23;UBERON:0003351,2.13e-12,23;UBERON:0009113,2.13e-12,23;UBERON:0003295,2.13e-12,23;UBERON:0009722,2.13e-12,23;UBERON:0005562,2.13e-12,23;UBERON:0007690,2.13e-12,23;UBERON:0006562,2.70e-12,24;UBERON:0001557,2.70e-12,24;UBERON:0001042,2.70e-12,24;UBERON:0008814,2.70e-12,24;UBERON:0009145,2.70e-12,24;UBERON:0003408,3.57e-12,24;UBERON:0002390,3.59e-12,45;UBERON:0003061,3.59e-12,45;UBERON:0002193,6.00e-12,48;UBERON:0002405,6.00e-12,48;UBERON:0000077,8.77e-12,35;UBERON:0003081,8.87e-10,87;UBERON:0000072,1.28e-09,27;UBERON:0001048,1.44e-07,134|phase1_expression=1.28119077683835,0.697950815278722,0.909998478779072,0.60492842261366,2.00358291978539,0.671517087647559,0.233612640595526,7.48915275961142,21.96304065566,18.7251621057595,5.65019295144166,3.43020283679947,10.4432445258036,5.42006494997784,3.99731714178795,5.4668322195253,9.09430441566591,3.62781490161973,2.74228867211478,3.39511721438424,0.935476191661768,0.595745707205312,0.783599367416806,1.11994695955385,0,1.72269589234506,0.430761996159075,1.07735616342945,0.380046838912748,0.756090389279792,0,1.27006134691926,3.07532393792285,0,0.866554859253824,1.49611180822643,1.42918549383658,1.67412652294763,0.7813353445238,1.0470474879476,0,1.36609096991689,0.485510353031154,0.503587271902309,0.405507724878058,0.550640256485045,1.56478268869608,0.65407546914134,0.439372365468944,0.58328969722285,0.839918529752175,0,3.52343472721246,16.6833292662609,16.4685961579807,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,1.03689612308478,1.21505344498522,1.68259969081106,0.285650984403804,0.220868540951614,0.734944795289724,0.766763768145891,0,1.10115880999389,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,0.589257170947335,0.569486723196412,0.745597783301202,1.51452386666368,0.982430281388212,1.44932244350839,0.860423876981386,1.3599426674155,0,0,0.896053774194671,1.40444420131752,0,0.779358013808606,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0.649473123033642,0,0,1.02765491747154,4.14300613835475,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.705532242814229,0.251333182659351,0.494389935468748,0.578397427679647,2.65383165584962,2.26473589926373,1.54589062922275,2.90925151881133,0,1.17112318804619,0.41889341362691,0.510914110417183,2.03685711660064,4.79922184794726,2.92261522268049,0.898743836428936,1.37250180845588,0.251308704225729,0.521472960576829,1.27857728665165,1.45451631191692,1.29793010454206,1.12023300235348,1.8661045591514,0.252722758433675,1.05220927943237,2.73252930221678,0.689706313300419,1.62055916824814,1.80845781402858,2.31324097114515,2.69038812598185,3.46696380870997,2.58703370739016,0.646703978798527,2.26927296201383,1.58356011747554,1.31517439456545,0.834141747676794,2.089512999133,1.85203922767149,0.59710280045548,0.702213187313235,1.80143534980301,1.42081749697796,2.07125772535502,0.703578179943289,1.62055855314913,1.42046841351126,2.95146347621106,1.85120535464854,0.465067889500816,1.3413670069981,1.98501082024188,2.63295759861569,0.32833492815819,2.83740833410495,1.31579988682799,2.41505126820156,0.939444931322602,1.68231958851302,0.102904612379284,0.330418782983798,0.528901133327089,0.853153002140936,1.62565670302307,1.54640953586512,0.605050573870028,1.33426826306922,0.570676878337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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:17355
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=uniprot:A3KMF4,uniprot:Q3UP77,uniprot:Q3UQD9
|association_with_transcript=-198bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end
|cluster_id=chr5:104182963..104182982,+
|description=CAGE_peak_5_at_Aff1_5end
|id=chr5:104182963..104182982,+
|ontology_enrichment_celltype=CL:0000791!7.70e-07!9;CL:0000789!7.70e-07!9;CL:0002420!7.70e-07!9;CL:0002419!7.70e-07!9;CL:0000790!7.70e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,1.74e-07,9;CL:0000789,1.74e-07,9;CL:0002420,1.74e-07,9;CL:0002419,1.74e-07,9;CL:0000790,1.74e-07,9;CL:0000624,8.47e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.13e-12!29;UBERON:0002370!2.03e-10!23;UBERON:0000974!2.03e-10!23;UBERON:0004807!2.03e-10!23;UBERON:0005058!2.03e-10!23;UBERON:0003351!2.03e-10!23;UBERON:0009113!2.03e-10!23;UBERON:0003295!2.03e-10!23;UBERON:0009722!2.03e-10!23;UBERON:0005562!2.03e-10!23;UBERON:0007690!2.03e-10!23;UBERON:0006562!2.39e-10!24;UBERON:0001557!2.39e-10!24;UBERON:0001042!2.39e-10!24;UBERON:0008814!2.39e-10!24;UBERON:0009145!2.39e-10!24;UBERON:0003408!3.03e-10!24;UBERON:0002390!3.11e-10!45;UBERON:0003061!3.11e-10!45;UBERON:0002193!8.65e-10!48;UBERON:0003081!1.63e-08!88;UBERON:0000072!1.37e-07!27;UBERON:0005057!2.64e-07!51;UBERON:0002405!9.48e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.36e-15,29;UBERON:0005057,6.36e-15,29;UBERON:0007811,2.57e-13,36;UBERON:0000153,5.36e-13,43;UBERON:0002370,2.13e-12,23;UBERON:0000974,2.13e-12,23;UBERON:0004807,2.13e-12,23;UBERON:0005058,2.13e-12,23;UBERON:0003351,2.13e-12,23;UBERON:0009113,2.13e-12,23;UBERON:0003295,2.13e-12,23;UBERON:0009722,2.13e-12,23;UBERON:0005562,2.13e-12,23;UBERON:0007690,2.13e-12,23;UBERON:0006562,2.70e-12,24;UBERON:0001557,2.70e-12,24;UBERON:0001042,2.70e-12,24;UBERON:0008814,2.70e-12,24;UBERON:0009145,2.70e-12,24;UBERON:0003408,3.57e-12,24;UBERON:0002390,3.59e-12,45;UBERON:0003061,3.59e-12,45;UBERON:0002193,6.00e-12,48;UBERON:0002405,6.00e-12,48;UBERON:0000077,8.77e-12,35;UBERON:0003081,8.87e-10,87;UBERON:0000072,1.28e-09,27;UBERON:0001048,1.44e-07,134
|phase1_expression=1.28119077683835,0.697950815278722,0.909998478779072,0.60492842261366,2.00358291978539,0.671517087647559,0.233612640595526,7.48915275961142,21.96304065566,18.7251621057595,5.65019295144166,3.43020283679947,10.4432445258036,5.42006494997784,3.99731714178795,5.4668322195253,9.09430441566591,3.62781490161973,2.74228867211478,3.39511721438424,0.935476191661768,0.595745707205312,0.783599367416806,1.11994695955385,0,1.72269589234506,0.430761996159075,1.07735616342945,0.380046838912748,0.756090389279792,0,1.27006134691926,3.07532393792285,0,0.866554859253824,1.49611180822643,1.42918549383658,1.67412652294763,0.7813353445238,1.0470474879476,0,1.36609096991689,0.485510353031154,0.503587271902309,0.405507724878058,0.550640256485045,1.56478268869608,0.65407546914134,0.439372365468944,0.58328969722285,0.839918529752175,0,3.52343472721246,16.6833292662609,16.4685961579807,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,1.03689612308478,1.21505344498522,1.68259969081106,0.285650984403804,0.220868540951614,0.734944795289724,0.766763768145891,0,1.10115880999389,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,0.589257170947335,0.569486723196412,0.745597783301202,1.51452386666368,0.982430281388212,1.44932244350839,0.860423876981386,1.3599426674155,0,0,0.896053774194671,1.40444420131752,0,0.779358013808606,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0.649473123033642,0,0,1.02765491747154,4.14300613835475,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.705532242814229,0.251333182659351,0.494389935468748,0.578397427679647,2.65383165584962,2.26473589926373,1.54589062922275,2.90925151881133,0,1.17112318804619,0.41889341362691,0.510914110417183,2.03685711660064,4.79922184794726,2.92261522268049,0.898743836428936,1.37250180845588,0.251308704225729,0.521472960576829,1.27857728665165,1.45451631191692,1.29793010454206,1.12023300235348,1.8661045591514,0.252722758433675,1.05220927943237,2.73252930221678,0.689706313300419,1.62055916824814,1.80845781402858,2.31324097114515,2.69038812598185,3.46696380870997,2.58703370739016,0.646703978798527,2.26927296201383,1.58356011747554,1.31517439456545,0.834141747676794,2.089512999133,1.85203922767149,0.59710280045548,0.702213187313235,1.80143534980301,1.42081749697796,2.07125772535502,0.703578179943289,1.62055855314913,1.42046841351126,2.95146347621106,1.85120535464854,0.465067889500816,1.3413670069981,1.98501082024188,2.63295759861569,0.32833492815819,2.83740833410495,1.31579988682799,2.41505126820156,0.939444931322602,1.68231958851302,0.102904612379284,0.330418782983798,0.528901133327089,0.853153002140936,1.62565670302307,1.54640953586512,0.605050573870028,1.33426826306922,0.570676878337677,0.949058123089023,1.15289268306808,0,0.198956472041151,1.55971269695296,0,0,0.398282546508734,1.13800740571849,1.02823661348756,2.25415471346161,1.4255592949172,2.13347735884388,2.52488951605147,2.15004226222475,0.590440591918409,1.41298855057237,1.35736880313981,0.296452627087149,2.66952169145751,2.16214894624523,4.04751802292737,1.62288097110802,1.68824011826692,2.29163266603278,1.43848068725405,1.13494658742525,0.549122826376163,0,0.744281895337007,0,0.252578877947112,0.717589654087649,0.964887042726734,0.369506380333209,1.32643988239339,0.325929952884052,1.01847051465113,1.87752198630802,2.84760637651087,0.476087281772027,1.75620283072019,0.945810864637146,0.664394068946325,1.2756381492599,0.983179888294428,1.03610989119537,0.867894351489069,0,0,0,0.551873492609465,0.80275294993896,0.937693492737625,0.819674726883377,2.01976741763498,0.94652465824877,0,1.72338718186239,2.15071918157297,1.55959071857676,1.69845918473299,1.61924280669958,1.16902343164525,1.18586333383957,0.321321316421807,0.99358059645788,1.6025904330053,0.977321756121456,3.13443233647817,0,0.728341908464944,1.209294227859,0.943025398779491,1.18120757152309,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,1.03135543248187,1.02131881726136,1.26042765821917,0.388076051348264,0.643011105094777,1.41872186913819,0.713475270408282,0.658196082408484,1.2178597964584,0.704015124191131,0.42366414172764,0.220528398054962,2.80306630000516,2.42196640043858,1.26657142349127,0.835606408021955,0.820704498725306,0.874442509889552,0.370850604021019,2.9048049735635,1.44470807574256,1.85194527369712,4.1441060541032,4.51090951479383,2.74533807847827,3.73952545986482,3.21888340344413,3.17859939750175,0,1.42351197111511,0.609958401380546,0.86404272657441,0.627264888043406,0.436725127492355,0.404593039154462,0.991841468704031,1.57053565190418,0.777689839750757,1.24267862617385,0,1.64468200648377,0.496375471371293,0.972255941720238,1.93739735216597,1.520605129417,1.87771581833206,1.0416350787516,1.15345278868282,0,0,20.8567339614598,2.02725215290164,2.87590680061516,6.10627867995637,13.9640822620636,17.28527786597,20.3130309688747,18.4611908968222,24.1309815376073,29.4920341754849,27.6263747274943,31.47889547894,24.0529604100824,33.4267940239287,1.36038230169127,0.443971906748129,0.179427713218951,0.167884616364078,1.15913756419314,1.31377732815827,1.64836461840539,1.07184189539533,0.501572104035363,0.564751842617067,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0.900642406448441,0.906284817968409,0,1.66059756134683,1.99512436700516,0.853668028770671,1.21553358534147,0.838452650511929,1.65459157605013,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,1.77435509923168,0.943131706930381,1.40462261204824,1.21647789569252,1.20614484806788,0.476293691283074,1.39061191133827,1.15745532278223,2.06042950401653,1.76638704161277,0.685738504770831,1.06485483695602,1.43061713968393,1.0174249164263,2.07040636913727,1.01537529470012,0.914639864363863,1.8414879800649,2.17286582153379,1.68342681497322,1.54225523561426,1.67457620038458,1.22769312950907,1.08455788830176,1.54325288784913,1.24905288968973,0.701794825336225,2.57845264857958,3.25190164517034,1.10295709559758,1.15933917810211
|short_description=p5@Aff1
}}

Revision as of 22:02, 5 August 2015

Short description:p5@Aff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Aff1_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -198bp_to_ENSMUST00000054979, NM_133919, uc008yjt.1_5end
EntrezGene:17355
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Aff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.44
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.47
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C56.11
thymus, embryo E17.CNhs10581.478-18C113.96
thymus, embryo E18.CNhs10595.1273-19G417.29
thymus, neonate N02.CNhs11181.1541-43F820.31
thymus, neonate N03.CNhs11137.2104-43C718.46
thymus, neonate N06.CNhs11197.681-26C424.13
thymus, neonate N07.CNhs11211.713-19D329.49
thymus, neonate N10.CNhs11194.748-24E427.63
thymus, neonate N20.CNhs11186.820-7A231.48
thymus, neonate N25.CNhs11125.1362-25G724.05
thymus, neonate N30.CNhs11132.1393-42G233.43
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.74e-079
alpha-beta T cell1.74e-079
immature T cell1.74e-079
mature T cell1.74e-079
immature alpha-beta T cell1.74e-079
CD4-positive, alpha-beta T cell8.47e-078

Uber anatomy
Ontology termp-valuen
hemopoietic organ6.36e-1529
immune organ6.36e-1529
craniocervical region2.57e-1336
anterior region of body5.36e-1343
thymus2.13e-1223
neck2.13e-1223
respiratory system epithelium2.13e-1223
hemolymphoid system gland2.13e-1223
pharyngeal epithelium2.13e-1223
thymic region2.13e-1223
pharyngeal gland2.13e-1223
entire pharyngeal arch endoderm2.13e-1223
thymus primordium2.13e-1223
early pharyngeal endoderm2.13e-1223
pharynx2.70e-1224
upper respiratory tract2.70e-1224
chordate pharynx2.70e-1224
pharyngeal arch system2.70e-1224
pharyngeal region of foregut2.70e-1224
gland of gut3.57e-1224
hematopoietic system3.59e-1245
blood island3.59e-1245
hemolymphoid system6.00e-1248
immune system6.00e-1248
mixed endoderm/mesoderm-derived structure8.77e-1235
lateral plate mesoderm8.87e-1087
segment of respiratory tract1.28e-0927
primordium1.44e-07134
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