FFCP PHASE1:Mm9::chr3:120862141..120862150,-: Difference between revisions
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{{FFCP|EntrezGene=66568|HGNC=|MCL_coexpression_id=184|UniProt=F7AYC4|association_with_transcript=-404bp_to_ENSMUST00000164573_5end|description=CAGE_peak_3_at_Rwdd3_5end|id=chr3:120862141..120862150,-|ontology_enrichment_celltype=CL:0002609!9.48e-10!6;CL:0002608!5.81e-08!3|ontology_enrichment_celltype_v019_2=CL:0002608,2.66e-39,3;CL:0002609,2.48e-20,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002346!4.17e-08!71;UBERON:0003075!4.17e-08!71;UBERON:0007284!4.17e-08!71;UBERON:0002616!1.15e-07!49;UBERON:0000955!1.96e-07!50;UBERON:0006238!1.96e-07!50;UBERON:0001049!5.28e-07!52;UBERON:0005068!5.28e-07!52;UBERON:0006241!5.28e-07!52;UBERON:0007135!5.28e-07!52;UBERON:0000033!6.56e-07!63;UBERON:0002020!7.22e-07!34;UBERON:0002780!8.75e-07!39;UBERON:0001890!8.75e-07!39;UBERON:0006240!8.75e-07!39;UBERON:0000369!9.78e-07!5;UBERON:0002435!9.78e-07!5;UBERON:0000204!9.78e-07!5;UBERON:0010082!9.78e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001954,6.59e-38,7;UBERON:0003022,6.59e-38,7;UBERON:0002421,6.59e-38,7;UBERON:0000349,6.59e-38,7;UBERON:0002600,6.59e-38,7;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0,0,0,1.5923803897944,0.958454710182364,3.67687514644008,0,0,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,1.74937841044784,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p3@Rwdd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66568 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7AYC4 | |||
|association_with_transcript=-404bp_to_ENSMUST00000164573_5end | |||
|cluster_id=chr3:120862141..120862150,- | |||
|description=CAGE_peak_3_at_Rwdd3_5end | |||
|id=chr3:120862141..120862150,- | |||
|ontology_enrichment_celltype=CL:0002609!9.48e-10!6;CL:0002608!5.81e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,2.66e-39,3;CL:0002609,2.48e-20,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002346!4.17e-08!71;UBERON:0003075!4.17e-08!71;UBERON:0007284!4.17e-08!71;UBERON:0002616!1.15e-07!49;UBERON:0000955!1.96e-07!50;UBERON:0006238!1.96e-07!50;UBERON:0001049!5.28e-07!52;UBERON:0005068!5.28e-07!52;UBERON:0006241!5.28e-07!52;UBERON:0007135!5.28e-07!52;UBERON:0000033!6.56e-07!63;UBERON:0002020!7.22e-07!34;UBERON:0002780!8.75e-07!39;UBERON:0001890!8.75e-07!39;UBERON:0006240!8.75e-07!39;UBERON:0000369!9.78e-07!5;UBERON:0002435!9.78e-07!5;UBERON:0000204!9.78e-07!5;UBERON:0010082!9.78e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,6.59e-38,7;UBERON:0003022,6.59e-38,7;UBERON:0002421,6.59e-38,7;UBERON:0000349,6.59e-38,7;UBERON:0002600,6.59e-38,7;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0,0,0,1.5923803897944,0.958454710182364,3.67687514644008,0,0,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,1.74937841044784,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p3@Rwdd3 | |||
}} |
Revision as of 22:53, 5 August 2015
Short description: | p3@Rwdd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rwdd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | -404bp_to_ENSMUST00000164573_5end |
EntrezGene: | 66568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 2.66e-39 | 3 |
neuron of cerebral cortex | 2.48e-20 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 6.59e-38 | 7 |
lobe parts of cerebral cortex | 6.59e-38 | 7 |
hippocampal formation | 6.59e-38 | 7 |
limbic system | 6.59e-38 | 7 |
limbic lobe | 6.59e-38 | 7 |
regional part of cerebral cortex | 2.41e-16 | 17 |
cerebral cortex | 1.90e-13 | 21 |
cerebral hemisphere | 1.90e-13 | 21 |
pallium | 1.90e-13 | 21 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |