FFCP PHASE2:Hg19::chr11:117668248..117668250,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57453 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14656 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14656 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8TD84 | ||
|association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | |association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | ||
|cluster_id=chr11:117668248..117668250,- | |cluster_id=chr11:117668248..117668250,- |
Latest revision as of 21:54, 15 September 2015
Short description: | p5@DSCAML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSCAML1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -272bp_to_ENST00000321322, NM_020693, uc001prh.1_5end |
EntrezGene: | DSCAML1 |
HGNC: | 14656 |
UniProt: | Q8TD84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@DSCAML1 |
---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.23e-66 | 1 |
cranial nerve | 1.23e-66 | 1 |
nerve trunk | 1.23e-66 | 1 |
nerve connecting eye with brain | 1.23e-66 | 1 |
nerve | 1.23e-66 | 1 |
retinal neural layer | 1.23e-66 | 1 |
presumptive neural retina | 1.23e-66 | 1 |
retina | 1.22e-44 | 6 |
photoreceptor array | 1.22e-44 | 6 |
posterior segment of eyeball | 1.22e-44 | 6 |
Showing 1 to 10 of 30 entries