FFCP PHASE2:Hg19::chr12:14721192..14721202,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:79887 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26215 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=79887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26215 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6P4A8 | ||
|association_with_transcript=80bp_to_ENST00000240617_5end | |association_with_transcript=80bp_to_ENST00000240617_5end | ||
|cluster_id=chr12:14721192..14721202,- | |cluster_id=chr12:14721192..14721202,- | ||
Latest revision as of 13:25, 17 September 2015
| Short description: | p8@PLBD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_PLBD1_5end |
| Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
| Association with transcript: | 80bp_to_ENST00000240617_5end |
| EntrezGene: | PLBD1 |
| HGNC: | 26215 |
| UniProt: | Q6P4A8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@PLBD1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD1a-positive Langerhans cell | 6.36e-57 | 2 |
| immature CD1a-positive Langerhans cell | 6.36e-57 | 2 |
| Langerhans cell | 1.61e-23 | 5 |
| macrophage dendritic cell progenitor | 1.60e-22 | 61 |
| granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
| macrophage | 5.35e-20 | 6 |
| immature conventional dendritic cell | 8.63e-20 | 5 |
| common dendritic progenitor | 8.63e-20 | 5 |
| defensive cell | 4.32e-15 | 48 |
| phagocyte | 4.32e-15 | 48 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 3.37e-18 | 76 |
| bone element | 6.63e-17 | 82 |
| skeletal element | 1.92e-15 | 90 |
| immune system | 5.86e-15 | 93 |
| hematopoietic system | 3.24e-14 | 98 |
| blood island | 3.24e-14 | 98 |
| skeletal system | 6.14e-14 | 100 |
| hemolymphoid system | 6.23e-13 | 108 |
| musculoskeletal system | 1.92e-08 | 167 |
| lateral plate mesoderm | 5.76e-07 | 203 |
Showing 1 to 10 of 10 entries
