FFCP PHASE2:Hg19::chr19:10381148..10381174,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3383 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5344 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5344 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P05362 | ||
|association_with_transcript=-342bp_to_ENST00000264832,NM_000201,uc002mnq.2,uc010xle.1_5end | |association_with_transcript=-342bp_to_ENST00000264832,NM_000201,uc002mnq.2,uc010xle.1_5end | ||
|cluster_id=chr19:10381148..10381174,+ | |cluster_id=chr19:10381148..10381174,+ | ||
Latest revision as of 00:14, 25 September 2015
| Short description: | p3@ICAM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ICAM1_5end |
| Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
| Association with transcript: | -342bp_to_ENST00000264832, NM_000201, uc002mnq.2, uc010xle.1_5end |
| EntrezGene: | ICAM1 |
| HGNC: | 5344 |
| UniProt: | P05362 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ICAM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 3.70e-111 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.70e-111 | 42 |
| myeloid leukocyte | 2.03e-103 | 72 |
| defensive cell | 1.13e-100 | 48 |
| phagocyte | 1.13e-100 | 48 |
| monopoietic cell | 4.43e-82 | 59 |
| monocyte | 4.43e-82 | 59 |
| monoblast | 4.43e-82 | 59 |
| promonocyte | 4.43e-82 | 59 |
| granulocyte monocyte progenitor cell | 1.32e-81 | 67 |
Showing 1 to 10 of 39 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.22e-70 | 76 |
| bone element | 1.19e-64 | 82 |
| hematopoietic system | 5.80e-63 | 98 |
| blood island | 5.80e-63 | 98 |
| skeletal element | 6.75e-58 | 90 |
| hemolymphoid system | 5.23e-56 | 108 |
| immune system | 1.16e-55 | 93 |
| skeletal system | 5.83e-51 | 100 |
| musculoskeletal system | 7.66e-26 | 167 |
| lateral plate mesoderm | 5.30e-24 | 203 |
Showing 1 to 10 of 14 entries
