FFCP PHASE1:Hg19::chr19:18433910..18433944,-
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| Short description: | p2@LSM4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LSM4_5end |
| Coexpression cluster: | C3766_Alveolar_Renal_chronic_Placental_nonsmall_acute_carcinoid |
| Association with transcript: | 56bp_to_ENST00000252816, NM_001252129, NM_012321, uc002niq.2_5end |
| EntrezGene: | LSM4 |
| HGNC: | 17259 |
| UniProt: | Q9Y4Z0 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@LSM4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.58e-21 | 253 |
| embryonic cell | 3.06e-11 | 250 |
| epithelial cell of nephron | 2.48e-08 | 15 |
| kidney cell | 7.39e-08 | 17 |
| kidney epithelial cell | 7.39e-08 | 17 |
| kidney cortical cell | 2.53e-07 | 12 |
| renal cortical epithelial cell | 2.53e-07 | 12 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| nephron epithelium | 2.48e-08 | 15 |
| renal tubule | 2.48e-08 | 15 |
| nephron tubule | 2.48e-08 | 15 |
| nephron | 2.48e-08 | 15 |
| uriniferous tubule | 2.48e-08 | 15 |
| nephrogenic mesenchyme | 2.48e-08 | 15 |
| cortex | 7.79e-08 | 15 |
| parenchyma | 1.22e-07 | 15 |
| cortex of kidney | 2.53e-07 | 12 |
| renal parenchyma | 2.53e-07 | 12 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 1.90e-21 | 235 |
| disease of cellular proliferation | 4.61e-21 | 239 |
| hematologic cancer | 1.51e-13 | 51 |
| immune system cancer | 1.51e-13 | 51 |
| leukemia | 3.50e-13 | 39 |
| cell type cancer | 1.03e-11 | 143 |
| myeloid leukemia | 2.30e-11 | 31 |
| organ system cancer | 3.20e-10 | 137 |
| carcinoma | 2.91e-08 | 106 |
| germ cell and embryonal cancer | 8.50e-07 | 22 |
Showing 1 to 10 of 11 entries
