FFCP PHASE2:Hg19::chr2:238277567..238277581,-
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| Short description: | p9@COL6A3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_COL6A3_5end |
| Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
| Association with transcript: | 99bp_to_AB209636_5end |
| EntrezGene: | COL6A3 |
| HGNC: | 2213 |
| UniProt: | Q59F25 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p9@COL6A3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| multi fate stem cell | 1.93e-18 | 427 |
| fibroblast | 2.88e-18 | 76 |
| somatic stem cell | 9.49e-18 | 433 |
| stem cell | 7.38e-17 | 441 |
| connective tissue cell | 6.61e-14 | 361 |
| cell of skeletal muscle | 1.76e-11 | 9 |
| mesenchymal cell | 1.71e-10 | 354 |
| muscle precursor cell | 8.50e-10 | 58 |
| myoblast | 8.50e-10 | 58 |
| multi-potent skeletal muscle stem cell | 8.50e-10 | 58 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 7.70e-13 | 371 |
| integument | 3.30e-12 | 46 |
| integumental system | 3.30e-12 | 46 |
| dense mesenchyme tissue | 3.80e-11 | 73 |
| somite | 7.64e-11 | 71 |
| presomitic mesoderm | 7.64e-11 | 71 |
| presumptive segmental plate | 7.64e-11 | 71 |
| dermomyotome | 7.64e-11 | 71 |
| trunk paraxial mesoderm | 7.64e-11 | 71 |
| surface structure | 1.02e-10 | 99 |
Showing 1 to 10 of 44 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 4.90e-08 | 5 |
| myotonic disease | 4.90e-08 | 5 |
| muscle tissue disease | 4.90e-08 | 5 |
| myopathy | 4.90e-08 | 5 |
| muscular disease | 4.90e-08 | 5 |
| myotonic dystrophy | 4.90e-08 | 5 |
Showing 1 to 6 of 6 entries
