FF:11559-120D2: Difference between revisions

Revision as of 21:26, 9 July 2012

Name:	Fibroblast - skin spinal muscular atrophy, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	NA
sex	M
age	7 month old child
cell type	fibroblast
cell line	NA
company	Coriell
collaboration	Splicing (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	custom
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0952
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.346
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.433
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0839
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.284
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0417
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.301
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.231
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.309
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.433
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0842
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.00337
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.147
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.232
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0332
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.15
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.115
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0417
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.344
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0797
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.788
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.382
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.433
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.4
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11912

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.409
MA0003.1	MA0003.1	0.994
MA0004.1	MA0004.1	6.72758e-4
MA0006.1	MA0006.1	0.0747
MA0007.1	MA0007.1	0.306
MA0009.1	MA0009.1	0.314
MA0014.1	MA0014.1	0.612
MA0017.1	MA0017.1	0.0912
MA0018.2	MA0018.2	5.45172e-5
MA0019.1	MA0019.1	0.0863
MA0024.1	MA0024.1	0.517
MA0025.1	MA0025.1	0.0289
MA0027.1	MA0027.1	0.9
MA0028.1	MA0028.1	0.266
MA0029.1	MA0029.1	0.332
MA0030.1	MA0030.1	0.0736
MA0031.1	MA0031.1	0.1
MA0035.2	MA0035.2	0.0128
MA0038.1	MA0038.1	0.298
MA0039.2	MA0039.2	0.0669
MA0040.1	MA0040.1	0.418
MA0041.1	MA0041.1	0.64
MA0042.1	MA0042.1	0.965
MA0043.1	MA0043.1	3.09981e-5
MA0046.1	MA0046.1	0.742
MA0047.2	MA0047.2	0.231
MA0048.1	MA0048.1	0.00239
MA0050.1	MA0050.1	4.31937e-7
MA0051.1	MA0051.1	0.00102
MA0052.1	MA0052.1	0.186
MA0055.1	MA0055.1	0.081
MA0057.1	MA0057.1	0.425
MA0058.1	MA0058.1	3.40705e-4
MA0059.1	MA0059.1	0.0913
MA0060.1	MA0060.1	0.891
MA0061.1	MA0061.1	0.00628
MA0062.2	MA0062.2	0.163
MA0065.2	MA0065.2	0.0326
MA0066.1	MA0066.1	0.467
MA0067.1	MA0067.1	0.0388
MA0068.1	MA0068.1	0.873
MA0069.1	MA0069.1	0.0329
MA0070.1	MA0070.1	0.751
MA0071.1	MA0071.1	0.622
MA0072.1	MA0072.1	0.736
MA0073.1	MA0073.1	0.884
MA0074.1	MA0074.1	0.805
MA0076.1	MA0076.1	0.271
MA0077.1	MA0077.1	0.638
MA0078.1	MA0078.1	0.307
MA0079.2	MA0079.2	0.766
MA0080.2	MA0080.2	6.77635e-9
MA0081.1	MA0081.1	0.00554
MA0083.1	MA0083.1	0.00183
MA0084.1	MA0084.1	0.398
MA0087.1	MA0087.1	0.669
MA0088.1	MA0088.1	0.444
MA0090.1	MA0090.1	1.11241e-4
MA0091.1	MA0091.1	0.82
MA0092.1	MA0092.1	0.358
MA0093.1	MA0093.1	0.00487
MA0099.2	MA0099.2	0.143
MA0100.1	MA0100.1	0.223
MA0101.1	MA0101.1	7.38076e-6
MA0102.2	MA0102.2	0.0048
MA0103.1	MA0103.1	3.10238e-6
MA0104.2	MA0104.2	3.71921e-5
MA0105.1	MA0105.1	0.399
MA0106.1	MA0106.1	0.0226
MA0107.1	MA0107.1	9.41817e-6
MA0108.2	MA0108.2	0.0839
MA0111.1	MA0111.1	0.228
MA0112.2	MA0112.2	0.247
MA0113.1	MA0113.1	0.977
MA0114.1	MA0114.1	0.0144
MA0115.1	MA0115.1	0.155
MA0116.1	MA0116.1	0.853
MA0117.1	MA0117.1	0.622
MA0119.1	MA0119.1	0.799
MA0122.1	MA0122.1	0.448
MA0124.1	MA0124.1	0.568
MA0125.1	MA0125.1	0.696
MA0131.1	MA0131.1	0.748
MA0135.1	MA0135.1	0.991
MA0136.1	MA0136.1	7.0904e-6
MA0137.2	MA0137.2	0.283
MA0138.2	MA0138.2	0.476
MA0139.1	MA0139.1	0.487
MA0140.1	MA0140.1	0.0986
MA0141.1	MA0141.1	0.166
MA0142.1	MA0142.1	0.112
MA0143.1	MA0143.1	0.786
MA0144.1	MA0144.1	0.299
MA0145.1	MA0145.1	0.492
MA0146.1	MA0146.1	0.494
MA0147.1	MA0147.1	0.00109
MA0148.1	MA0148.1	0.313
MA0149.1	MA0149.1	0.758
MA0150.1	MA0150.1	0.159
MA0152.1	MA0152.1	0.136
MA0153.1	MA0153.1	0.899
MA0154.1	MA0154.1	0.994
MA0155.1	MA0155.1	0.715
MA0156.1	MA0156.1	0.0174
MA0157.1	MA0157.1	0.328
MA0159.1	MA0159.1	0.596
MA0160.1	MA0160.1	0.0235
MA0162.1	MA0162.1	0.0532
MA0163.1	MA0163.1	0.152
MA0164.1	MA0164.1	0.74
MA0258.1	MA0258.1	0.297
MA0259.1	MA0259.1	0.275

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11912

Novel motif	Logo	P-value
1	1	0.431
10	10	0.857
100	100	0.58
101	101	0.292
102	102	0.171
103	103	0.626
104	104	0.953
105	105	0.684
106	106	0.119
107	107	0.986
108	108	0.826
109	109	0.698
11	11	0.696
110	110	0.663
111	111	0.507
112	112	0.949
113	113	0.00199
114	114	0.907
115	115	0.435
116	116	0.28
117	117	0.391
118	118	0.637
119	119	0.192
12	12	0.776
120	120	0.638
121	121	0.591
122	122	0.217
123	123	3.90308e-5
124	124	0.316
125	125	0.413
126	126	0.405
127	127	0.828
128	128	0.292
129	129	0.506
13	13	0.689
130	130	0.0504
131	131	0.506
132	132	0.68
133	133	0.496
134	134	0.208
135	135	0.543
136	136	0.16
137	137	0.915
138	138	0.259
139	139	0.0331
14	14	0.248
140	140	0.145
141	141	0.038
142	142	0.676
143	143	0.917
144	144	0.559
145	145	0.755
146	146	0.949
147	147	0.264
148	148	0.0209
149	149	0.0346
15	15	0.465
150	150	0.502
151	151	0.33
152	152	0.146
153	153	0.614
154	154	0.412
155	155	0.00956
156	156	0.659
157	157	0.149
158	158	0.00251
159	159	0.171
16	16	0.487
160	160	0.851
161	161	0.0656
162	162	0.726
163	163	0.344
164	164	0.341
165	165	0.16
166	166	0.0607
167	167	0.496
168	168	0.31
169	169	0.226
17	17	0.966
18	18	0.239
19	19	0.0258
2	2	0.403
20	20	0.354
21	21	0.137
22	22	0.431
23	23	0.975
24	24	0.985
25	25	0.604
26	26	0.897
27	27	0.942
28	28	0.522
29	29	0.759
3	3	0.805
30	30	0.227
31	31	0.964
32	32	7.88631e-6
33	33	0.353
34	34	0.968
35	35	0.386
36	36	0.0722
37	37	0.43
38	38	0.56
39	39	0.401
4	4	0.802
40	40	0.26
41	41	0.465
42	42	0.729
43	43	0.652
44	44	0.985
45	45	0.9
46	46	0.856
47	47	0.72
48	48	0.645
49	49	0.105
5	5	0.699
50	50	0.725
51	51	0.615
52	52	0.709
53	53	0.259
54	54	0.981
55	55	0.382
56	56	0.749
57	57	0.514
58	58	0.202
59	59	0.294
6	6	0.575
60	60	0.296
61	61	0.265
62	62	0.456
63	63	0.719
64	64	0.554
65	65	0.861
66	66	0.431
67	67	0.623
68	68	0.712
69	69	0.762
7	7	0.131
70	70	0.139
71	71	0.959
72	72	0.227
73	73	0.138
74	74	0.105
75	75	0.556
76	76	0.457
77	77	0.0656
78	78	0.233
79	79	0.17
8	8	0.993
80	80	0.596
81	81	0.49
82	82	0.922
83	83	0.2
84	84	0.278
85	85	0.685
86	86	0.4
87	87	0.188
88	88	0.741
89	89	0.36
9	9	0.83
90	90	0.685
91	91	0.771
92	92	0.805
93	93	0.32
94	94	0.974
95	95	0.944
96	96	0.922
97	97	0.581
98	98	0.154
99	99	0.0669

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11912

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000251 human fibroblast - skin spinal muscular atrophy sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000251 (human fibroblast - skin spinal muscular atrophy sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.69!489.05!LHX9;;chr7:19157248..19157268,-!p1@TWIST1!1.85!184.28!TWIST1;;chr9:132427883..132427951,+!p2@PRRX2!1.73!52.19!PRRX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.58!36.98!HOXC5;;chr9:132427972..132428056,+!p1@PRRX2!1.57!47.25!PRRX2;;chr10:119303078..119303169,+!p2@EMX2!1.41!24.58!EMX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.39!118.59!CREB3L1;;chr15:57511609..57511651,+!p2@TCF12!1.39!38.89!TCF12;;chr1:170632285..170632309,+!p1@PRRX1!1.39!26.60!PRRX1;;chr2:176969228..176969260,+!p1@HOXD11!1.39!23.37!HOXD11;;chr10:28034739..28034756,-!p1@MKX!1.37!22.57!MKX;;chr8:67525443..67525459,-!p2@MYBL1!1.36!32.34!MYBL1;;chr1:197886421..197886432,+!p2@LHX9!1.34!20.65!LHX9;;chr5:72744594..72744609,-!p1@FOXD1!1.28!80.30!FOXD1;;chr1:170633348..170633399,+!p2@PRRX1!1.28!24.38!PRRX1;;chr2:239756739..239756755,+!p2@TWIST2!1.16!23.17!TWIST2;;chr4:174450089..174450153,-!p2@HAND2!1.15!13.10!HAND2;;chr7:27224842..27224872,-!p1@HOXA11!1.14!12.80!HOXA11;;chr4:174451370..174451387,-!p1@HAND2!1.12!12.29!HAND2;;chr6:19837592..19837621,+!p1@ID4!1.11!73.05!ID4;;chr7:27224795..27224840,-!p2@HOXA11!1.11!11.99!HOXA11;;chr4:81118647..81118666,+!p1@PRDM8!1.08!14.61!PRDM8;;chr2:176969179..176969226,+!p2@HOXD11!1.08!11.08!HOXD11;;chr1:197886665..197886732,+!p3@LHX9!1.07!10.68!LHX9;;chr11:46299539..46299620,+!p2@CREB3L1!1.05!17.63!CREB3L1;;chr7:27205136..27205164,-!p1@HOXA9!1.05!10.18!HOXA9;;chr20:55204351..55204377,+!p1@TFAP2C!1.02!12.19!TFAP2C;;chr2:176994408..176994492,+!p1@HOXD8!1.02!9.47!HOXD8;;chr3:157823517..157823562,-!p1@SHOX2!1.01!9.87!SHOX2;;chr5:72744445..72744466,-!p2@FOXD1!1.00!15.01!FOXD1;;chr15:37392534..37392562,-!p10@MEIS2!1.00!9.97!MEIS2;;chr5:2751762..2751784,-!p1@IRX2!1.00!8.97!IRX2;;chr7:27205106..27205134,-!p2@HOXA9!0.99!8.87!HOXA9;;chr2:176969097..176969109,+!p3@HOXD11!0.99!8.87!HOXD11;;chr1:170633262..170633285,+!p3@PRRX1!0.98!9.87!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!0.98!8.46!KDM5D;;chr2:176969124..176969155,+!p5@HOXD11!0.97!8.26!HOXD11;;chr11:65686802..65686818,+!p6@DRAP1!0.96!14.31!DRAP1;;chr2:172949484..172949522,+!p1@DLX1!0.96!8.06!DLX1;;chr11:65686732..65686756,+!p2@DRAP1!0.95!34.26!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!0.95!8.66!PRRX1;;chr3:147111231..147111281,+!p3@ZIC1!0.94!7.66!ZIC1;;chr1:170633058..170633084,+!p5@PRRX1!0.93!7.46!PRRX1;;chr4:111558135..111558198,-!p2@PITX2!0.91!7.05!PITX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.89!6.85!HOXC5;;chr8:93074803..93074845,-!p1@RUNX1T1!0.89!6.75!RUNX1T1;;chr19:47523058..47523114,+!p1@NPAS1!0.88!6.55!NPAS1;;chr12:54402745..54402788,+!p1@HOXC8!0.88!6.55!HOXC8;;chr12:53614115..53614154,-!p1@RARG!0.87!35.97!RARG;;chr19:13134772..13134822,+!p2@NFIX!0.87!9.77!NFIX;;chr16:51185172..51185197,-!p1@SALL1!0.87!6.45!SALL1;;chr7:27213893..27213954,-!p1@HOXA10!0.87!6.45!HOXA10;;chr2:172950227..172950249,+!p2@DLX1!0.87!6.35!DLX1;;chr2:239756671..239756732,+!p1@TWIST2!0.86!21.06!TWIST2;;chr15:37392616..37392638,-!p2@MEIS2!0.86!20.55!MEIS2;;chr12:80085061..80085119,-!p6@PAWR!0.84!9.67!PAWR;;chr6:10415276..10415341,-!p2@TFAP2A!0.84!7.25!TFAP2A;;chr5:72744562..72744573,-!p3@FOXD1!0.83!7.35!FOXD1;;chr2:8822176..8822196,+!p1@ID2!0.80!804.51!ID2;;chr8:49833948..49833973,-!p2@SNAI2!0.80!36.17!SNAI2;;chr11:65687362..65687436,+!p3@DRAP1!0.80!26.30!DRAP1;;chr3:147111198..147111225,+!p4@ZIC1!0.80!5.34!ZIC1;;chr4:4861385..4861398,+!p1@MSX1!0.79!16.22!MSX1;;chr2:172967621..172967637,-!p1@DLX2!0.79!14.81!DLX2;;chr1:170632250..170632277,+!p7@PRRX1!0.79!5.14!PRRX1;;chr15:37390850..37390909,-!p3@MEIS2!0.77!10.28!MEIS2;;chr5:321810..321877,+!p1@AHRR!0.76!16.52!AHRR;;chr6:100912752..100912778,-!p2@SIM1!0.76!4.74!SIM1;;chr10:119302645..119302712,+!p3@EMX2!0.76!4.74!EMX2;;chr15:37390482..37390572,-!p7@MEIS2!0.75!6.55!MEIS2;;chr15:83953397..83953425,-!p1@BNC1!0.75!5.44!BNC1;;chr5:88081308..88081333,-!p8@MEF2C!0.75!4.63!MEF2C;;chr15:37392576..37392589,-!p12@MEIS2!0.74!5.64!MEIS2;;chr5:72743793..72743855,-!p4@FOXD1!0.74!5.44!FOXD1;;chr6:100912785..100912822,-!p1@SIM1!0.74!4.53!SIM1;;chr1:44513995..44514031,+!p1@KLF17!0.74!4.53!KLF17;;chrY:2803415..2803468,+!p1@ZFY!0.74!4.43!ZFY;;chr10:119302232..119302265,+!p1@EMX2!0.74!4.43!EMX2;;chr8:49833978..49833996,-!p1@SNAI2!0.73!100.95!SNAI2;;chr7:137686763..137686784,-!p5@CREB3L2!0.73!8.06!CREB3L2;;chr15:37392703..37392717,-!p8@MEIS2!0.73!6.55!MEIS2;;chr21:36260773..36260804,-!p7@RUNX1!0.73!6.15!RUNX1;;chr3:147127142..147127168,+!p1@ZIC1!0.73!4.33!ZIC1;;chr11:12696071..12696086,+!p3@TEAD1!0.72!5.84!TEAD1;;chr1:170632723..170632739,+!p8@PRRX1!0.72!4.23!PRRX1;;chr11:65687222..65687240,+!p7@DRAP1!0.71!5.44!DRAP1;;chr10:28035133..28035148,-!p3@MKX!0.71!4.13!MKX;;chr20:55205825..55205847,+!p2@TFAP2C!0.71!4.13!TFAP2C;;chr15:37392724..37392757,-!p1@MEIS2!0.70!20.55!MEIS2;;chr1:23885981..23886002,-!p1@ID3!0.69!776.29!ID3;;chr18:22932080..22932170,-!p1@ZNF521!0.69!18.64!ZNF521;;chr2:19558373..19558392,-!p1@OSR1!0.69!11.89!OSR1;;chr18:53068911..53068935,-!p4@TCF4!0.69!4.53!TCF4;;chr2:200322654..200322707,-!p2@SATB2!0.68!5.74!SATB2;;chr1:197886772..197886790,+!p4@LHX9!0.68!3.83!LHX9;;chr14:62162258..62162269,+!p2@HIF1A!0.67!41.31!HIF1A;;chr3:128206762..128206781,-!p2@GATA2!0.67!26.09!GATA2;;chr2:85981107..85981120,+!p3@ATOH8!0.67!3.73!ATOH8;;chr15:57511589..57511608,+!p4@TCF12!0.67!3.73!TCF12;;chr1:170632477..170632506,+!p6@PRRX1!0.67!3.63!PRRX1;;chr12:115121962..115121987,-!p1@TBX3!0.66!34.66!TBX3;;chr11:46299186..46299195,+!p3@CREB3L1!0.66!4.03!CREB3L1;;chr2:102091566..102091581,-!p1@RFX8!0.66!3.53!RFX8;;chr7:27196267..27196311,-!p1@HOXA7!0.65!3.43!HOXA7;;chr12:124873357..124873401,-!p1@NCOR2!0.64!46.35!NCOR2;;chr7:19157043..19157088,-!p2@TWIST1!0.64!9.47!TWIST1;;chr6:10412600..10412637,-!p1@TFAP2A!0.64!6.05!TFAP2A;;chr10:119302508..119302559,+!p5@EMX2!0.64!3.32!EMX2;;chr2:102091144..102091183,-!p2@RFX8!0.64!3.32!RFX8;;chr11:65687158..65687216,+!p4@DRAP1!0.63!22.06!DRAP1;;chr15:37392094..37392116,-!p6@MEIS2!0.63!4.23!MEIS2;;chr2:172967242..172967265,-!p2@DLX2!0.63!3.22!DLX2;;chr2:172967276..172967296,-!p3@DLX2!0.63!3.22!DLX2;;chr10:28032421..28032494,-!p2@MKX!0.63!3.22!MKX;;chr8:67525473..67525518,-!p1@MYBL1!0.62!8.16!MYBL1;;chr15:37392593..37392607,-!p13@MEIS2!0.62!3.93!MEIS2;;chr1:119530493..119530572,-!p1@TBX15!0.62!3.12!TBX15;;chr12:80085120..80085156,-!p14@PAWR!0.62!3.12!PAWR;;chr11:65686952..65686975,+!p5@DRAP1!0.61!20.25!DRAP1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.61!15.11!LRRFIP2;;chr17:46622070..46622109,-!p1@HOXB2!0.61!7.76!HOXB2;;chr16:54964740..54964789,+!p1@IRX5!0.61!4.74!IRX5;;chr11:65687243..65687276,+!p8@DRAP1!0.61!4.43!DRAP1;;chr10:28035112..28035130,-!p5@MKX!0.60!3.02!MKX;;chr12:114843940..114843955,-!p2@TBX5!0.60!3.02!TBX5;;chr20:30193083..30193098,+!p1@ID1!0.59!290.17!ID1;;chr13:37494248..37494260,-!p3@SMAD9!0.59!2.92!SMAD9;;chr13:37494275..37494304,-!p2@SMAD9!0.59!2.92!SMAD9;;chr3:147111505..147111529,+!p6@ZIC1!0.59!2.92!ZIC1;;chr3:114343768..114343822,-!p1@ZBTB20!0.58!14.51!ZBTB20;;chr3:147110055..147110129,-!p1@ZIC4!0.58!2.82!ZIC4;;chr5:139492456..139492489,+!p7@PURA!0.58!2.82!PURA;;chr5:2751785..2751808,-!p2@IRX2!0.58!2.82!IRX2;;chr8:93074848..93074871,-!p3@RUNX1T1!0.58!2.82!RUNX1T1;;chr17:46682321..46682362,-!p1@HOXB6!0.58!2.82!HOXB6;;chr14:62162285..62162296,+!p3@HIF1A!0.57!17.33!HIF1A;;chr2:85980951..85981004,+!p1@ATOH8!0.57!4.84!ATOH8;;chr16:86612320..86612394,+!p1@FOXL1!0.57!2.72!FOXL1;;chr20:42543441..42543497,+!p1@TOX2!0.56!14.51!TOX2;;chr10:114710244..114710257,+!p3@TCF7L2!0.56!8.36!TCF7L2;;chr1:197886646..197886657,+!p5@LHX9!0.56!2.62!LHX9;;chr18:52969674..52969685,-!p24@TCF4!0.56!2.62!TCF4;;chr2:119604456..119604501,-!p2@EN1!0.56!2.62!EN1;;chr10:63809106..63809127,+!p1@ARID5B!0.55!42.92!ARID5B;;chr14:24837368..24837401,+!p1@NFATC4!0.55!7.05!NFATC4;;chr17:46622114..46622138,-!p4@HOXB2!0.55!4.33!HOXB2;;chr6:1389789..1389821,+!p1@FOXF2!0.55!3.83!FOXF2;;chr12:54447599..54447630,+!p3@HOXC4!0.55!3.32!HOXC4;;chr15:37390374..37390422,-!p9@MEIS2!0.55!3.32!MEIS2;;chr12:54394309..54394336,+!p2@HOXC9!0.55!2.52!HOXC9;;chr3:52001448..52001478,-!p2@PCBP4!0.54!44.03!PCBP4;;chr2:121493425..121493474,+!p1@GLI2!0.54!6.35!GLI2;;chr14:75894714..75894733,+!p1@JDP2!0.53!87.65!JDP2;;chr2:145275162..145275202,-!p2@ZEB2!0.53!17.53!ZEB2;;chr5:43067636..43067674,+!p6@ZNF131!0.53!3.53!ZNF131;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.53!2.62!GLIS1;;chr1:170632137..170632172,+!p10@PRRX1!0.53!2.42!PRRX1;;chr11:46316699..46316719,+!p10@CREB3L1!0.53!2.42!CREB3L1;;chr2:172967323..172967336,-!p4@DLX2!0.53!2.42!DLX2;;chr1:151032860..151032918,+!p1@MLLT11!0.52!35.16!MLLT11;;chr7:42276787..42276815,-!p1@GLI3!0.52!7.46!GLI3;;chr5:3595977..3595999,+!p1@IRX1!0.52!2.32!IRX1;;chr7:27212501..27212513,-!p5@HOXA10!0.52!2.32!HOXA10;;chrY:21906761..21906810,-!p2@KDM5D!0.52!2.32!KDM5D;;chr12:124873852..124873881,-!p3@NCOR2!0.51!17.33!NCOR2;;chr3:52001426..52001447,-!p3@PCBP4!0.51!7.66!PCBP4;;chr5:158526917..158526932,-!p1@EBF1!0.51!6.65!EBF1;;chr1:200379104..200379128,-!p2@ZNF281!0.51!6.55!ZNF281;;chr13:37494365..37494381,-!p1@SMAD9!0.51!4.43!SMAD9;;chr7:27192185..27192209,-!p1@HOXA3!0.51!2.22!HOXA3;;chr2:5832508..5832524,+!p1@SOX11!0.51!2.22!SOX11;;chr11:65667846..65667868,-!p1@FOSL1!0.50!75.56!FOSL1;;chr6:31126291..31126399,+!p1@TCF19!0.50!27.00!TCF19;;chr2:66662281..66662308,+!p1@MEIS1!0.50!9.37!MEIS1;;chr21:36421535..36421610,-!p2@RUNX1!0.49!9.37!RUNX1;;chr17:46621937..46621966,-!p2@HOXB2!0.49!6.95!HOXB2;;chr20:42543506..42543549,+!p2@TOX2!0.49!6.15!TOX2;;chr2:200323414..200323455,-!p1@SATB2!0.49!5.34!SATB2;;chr8:67525524..67525543,-!p3@MYBL1!0.49!3.93!MYBL1;;chr1:164528911..164528940,+!p7@PBX1!0.49!3.53!PBX1;;chr1:170632439..170632465,+!p11@PRRX1!0.49!2.12!PRRX1;;chr8:93115274..93115323,-!p4@RUNX1T1!0.49!2.12!RUNX1T1;;chr16:51185318..51185348,-!p2@SALL1!0.49!2.12!SALL1;;chr11:46333934..46333963,+!p5@CREB3L1!0.49!2.12!CREB3L1;;chr11:65686855..65686946,+!p1@DRAP1!0.48!205.64!DRAP1;;chr17:38256822..38256851,-!p1@NR1D1!0.48!21.36!NR1D1;;chr17:1958388..195840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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11559-120D2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:26, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0