FFCP PHASE1:Mm9::chr1:157264496..157264516,-: Difference between revisions
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|id=chr1:157264496..157264516,- | |id=chr1:157264496..157264516,- | ||
|ontology_enrichment_celltype=CL:0000117!6.40e-11!23;CL:0000337!6.40e-11!23;CL:0000540!2.83e-07!33;CL:0000047!2.83e-07!33;CL:0000031!2.83e-07!33;CL:0000404!2.83e-07!33 | |ontology_enrichment_celltype=CL:0000117!6.40e-11!23;CL:0000337!6.40e-11!23;CL:0000540!2.83e-07!33;CL:0000047!2.83e-07!33;CL:0000031!2.83e-07!33;CL:0000404!2.83e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-11,23;CL:0000337,1.06e-11,23;CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33;CL:0000393,9.06e-07,39;CL:0000211,9.06e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.68e-12!63;UBERON:0003056!6.79e-12!49;UBERON:0001049!2.63e-11!52;UBERON:0005068!2.63e-11!52;UBERON:0006241!2.63e-11!52;UBERON:0007135!2.63e-11!52;UBERON:0002020!5.60e-11!34;UBERON:0002346!7.41e-11!71;UBERON:0003075!7.41e-11!71;UBERON:0007284!7.41e-11!71;UBERON:0001017!2.48e-10!73;UBERON:0005743!2.48e-10!73;UBERON:0000073!2.91e-10!75;UBERON:0001016!2.91e-10!75;UBERON:0004121!1.41e-09!102;UBERON:0000924!1.41e-09!102;UBERON:0006601!1.41e-09!102;UBERON:0003080!2.26e-09!40;UBERON:0000955!4.22e-09!50;UBERON:0006238!4.22e-09!50;UBERON:0002780!5.11e-09!39;UBERON:0001890!5.11e-09!39;UBERON:0006240!5.11e-09!39;UBERON:0002616!1.11e-08!49;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29 | |ontology_enrichment_uberon=UBERON:0000033!1.68e-12!63;UBERON:0003056!6.79e-12!49;UBERON:0001049!2.63e-11!52;UBERON:0005068!2.63e-11!52;UBERON:0006241!2.63e-11!52;UBERON:0007135!2.63e-11!52;UBERON:0002020!5.60e-11!34;UBERON:0002346!7.41e-11!71;UBERON:0003075!7.41e-11!71;UBERON:0007284!7.41e-11!71;UBERON:0001017!2.48e-10!73;UBERON:0005743!2.48e-10!73;UBERON:0000073!2.91e-10!75;UBERON:0001016!2.91e-10!75;UBERON:0004121!1.41e-09!102;UBERON:0000924!1.41e-09!102;UBERON:0006601!1.41e-09!102;UBERON:0003080!2.26e-09!40;UBERON:0000955!4.22e-09!50;UBERON:0006238!4.22e-09!50;UBERON:0002780!5.11e-09!39;UBERON:0001890!5.11e-09!39;UBERON:0006240!5.11e-09!39;UBERON:0002616!1.11e-08!49;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.17e-13,64;UBERON:0003075,2.17e-13,64;UBERON:0007284,2.17e-13,64;UBERON:0003056,1.86e-12,49;UBERON:0001049,7.86e-12,52;UBERON:0005068,7.86e-12,52;UBERON:0006241,7.86e-12,52;UBERON:0007135,7.86e-12,52;UBERON:0000073,1.44e-11,54;UBERON:0002020,1.68e-11,34;UBERON:0004121,5.73e-11,95;UBERON:0000924,5.73e-11,95;UBERON:0006601,5.73e-11,95;UBERON:0010371,7.62e-11,73;UBERON:0001017,1.92e-10,73;UBERON:0001016,2.25e-10,75;UBERON:0003080,8.32e-10,40;UBERON:0000955,1.05e-09,47;UBERON:0006238,1.05e-09,47;UBERON:0002780,1.96e-09,39;UBERON:0001890,1.96e-09,39;UBERON:0006240,1.96e-09,39;UBERON:0002616,2.94e-09,46;UBERON:0003528,5.05e-09,29;UBERON:0002791,5.05e-09,29;UBERON:0001893,5.05e-09,29 | |||
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| ||
|short_description=p2@Xpr1 | |short_description=p2@Xpr1 | ||
}} | }} |
Revision as of 02:15, 15 November 2012
Short description: | p2@Xpr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Xpr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 8bp_to_ENSMUST00000129271_5end |
EntrezGene: | Xpr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-11 | 23 |
neuron | 1.21e-07 | 33 |
neuronal stem cell | 1.21e-07 | 33 |
neuroblast | 1.21e-07 | 33 |
electrically signaling cell | 1.21e-07 | 33 |
electrically responsive cell | 9.06e-07 | 39 |
electrically active cell | 9.06e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.17e-13 | 64 |
neural plate | 2.17e-13 | 64 |
presumptive neural plate | 2.17e-13 | 64 |
pre-chordal neural plate | 1.86e-12 | 49 |
neural tube | 7.86e-12 | 52 |
neural rod | 7.86e-12 | 52 |
future spinal cord | 7.86e-12 | 52 |
neural keel | 7.86e-12 | 52 |
regional part of nervous system | 1.44e-11 | 54 |
gray matter | 1.68e-11 | 34 |
ectoderm-derived structure | 5.73e-11 | 95 |
ectoderm | 5.73e-11 | 95 |
presumptive ectoderm | 5.73e-11 | 95 |
ecto-epithelium | 7.62e-11 | 73 |
central nervous system | 1.92e-10 | 73 |
nervous system | 2.25e-10 | 75 |
anterior neural tube | 8.32e-10 | 40 |
brain | 1.05e-09 | 47 |
future brain | 1.05e-09 | 47 |
regional part of forebrain | 1.96e-09 | 39 |
forebrain | 1.96e-09 | 39 |
future forebrain | 1.96e-09 | 39 |
regional part of brain | 2.94e-09 | 46 |
brain grey matter | 5.05e-09 | 29 |
regional part of telencephalon | 5.05e-09 | 29 |
telencephalon | 5.05e-09 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.