FFCP PHASE1:Mm9::chr13:54167184..54167228,+: Difference between revisions
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|id=chr13:54167184..54167228,+ | |id=chr13:54167184..54167228,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.34e-14!23;CL:0000337!6.34e-14!23;CL:0000540!3.84e-11!33;CL:0000047!3.84e-11!33;CL:0000031!3.84e-11!33;CL:0000404!3.84e-11!33;CL:0002321!4.58e-11!70;CL:0000220!4.58e-11!70;CL:0002319!2.17e-09!43;CL:0000221!3.16e-09!44;CL:0000133!3.16e-09!44;CL:0000393!8.81e-09!39;CL:0000211!8.81e-09!39;CL:0000055!5.93e-08!50 | |ontology_enrichment_celltype=CL:0000117!6.34e-14!23;CL:0000337!6.34e-14!23;CL:0000540!3.84e-11!33;CL:0000047!3.84e-11!33;CL:0000031!3.84e-11!33;CL:0000404!3.84e-11!33;CL:0002321!4.58e-11!70;CL:0000220!4.58e-11!70;CL:0002319!2.17e-09!43;CL:0000221!3.16e-09!44;CL:0000133!3.16e-09!44;CL:0000393!8.81e-09!39;CL:0000211!8.81e-09!39;CL:0000055!5.93e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.33e-14,23;CL:0000337,6.33e-14,23;CL:0000540,3.84e-11,33;CL:0000047,3.84e-11,33;CL:0000031,3.84e-11,33;CL:0000404,3.84e-11,33;CL:0002321,4.57e-11,70;CL:0002319,2.16e-09,43;CL:0000221,3.16e-09,44;CL:0000133,3.16e-09,44;CL:0000393,8.80e-09,39;CL:0000211,8.80e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.47e-13!73;UBERON:0005743!1.47e-13!73;UBERON:0000073!8.39e-13!75;UBERON:0001016!8.39e-13!75;UBERON:0002020!1.05e-12!34;UBERON:0001049!4.46e-11!52;UBERON:0005068!4.46e-11!52;UBERON:0006241!4.46e-11!52;UBERON:0007135!4.46e-11!52;UBERON:0000955!5.34e-11!50;UBERON:0006238!5.34e-11!50;UBERON:0002616!1.52e-10!49;UBERON:0000033!4.00e-10!63;UBERON:0003080!6.34e-10!40;UBERON:0002791!7.21e-10!29;UBERON:0003528!7.21e-10!29;UBERON:0001893!7.21e-10!29;UBERON:0002346!9.74e-10!71;UBERON:0003075!9.74e-10!71;UBERON:0007284!9.74e-10!71;UBERON:0002780!1.31e-09!39;UBERON:0001890!1.31e-09!39;UBERON:0006240!1.31e-09!39;UBERON:0003056!2.92e-09!49;UBERON:0004121!4.57e-09!102;UBERON:0000924!4.57e-09!102;UBERON:0006601!4.57e-09!102 | |ontology_enrichment_uberon=UBERON:0001017!1.47e-13!73;UBERON:0005743!1.47e-13!73;UBERON:0000073!8.39e-13!75;UBERON:0001016!8.39e-13!75;UBERON:0002020!1.05e-12!34;UBERON:0001049!4.46e-11!52;UBERON:0005068!4.46e-11!52;UBERON:0006241!4.46e-11!52;UBERON:0007135!4.46e-11!52;UBERON:0000955!5.34e-11!50;UBERON:0006238!5.34e-11!50;UBERON:0002616!1.52e-10!49;UBERON:0000033!4.00e-10!63;UBERON:0003080!6.34e-10!40;UBERON:0002791!7.21e-10!29;UBERON:0003528!7.21e-10!29;UBERON:0001893!7.21e-10!29;UBERON:0002346!9.74e-10!71;UBERON:0003075!9.74e-10!71;UBERON:0007284!9.74e-10!71;UBERON:0002780!1.31e-09!39;UBERON:0001890!1.31e-09!39;UBERON:0006240!1.31e-09!39;UBERON:0003056!2.92e-09!49;UBERON:0004121!4.57e-09!102;UBERON:0000924!4.57e-09!102;UBERON:0006601!4.57e-09!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-13,73;UBERON:0000073,3.31e-13,54;UBERON:0001016,8.38e-13,75;UBERON:0002020,1.05e-12,34;UBERON:0001049,4.45e-11,52;UBERON:0005068,4.45e-11,52;UBERON:0006241,4.45e-11,52;UBERON:0007135,4.45e-11,52;UBERON:0002346,1.74e-10,64;UBERON:0003075,1.74e-10,64;UBERON:0007284,1.74e-10,64;UBERON:0003080,6.33e-10,40;UBERON:0003528,7.20e-10,29;UBERON:0002791,7.20e-10,29;UBERON:0001893,7.20e-10,29;UBERON:0002780,1.31e-09,39;UBERON:0001890,1.31e-09,39;UBERON:0006240,1.31e-09,39;UBERON:0000955,1.80e-09,47;UBERON:0006238,1.80e-09,47;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0003056,2.92e-09,49;UBERON:0002616,4.88e-09,46;UBERON:0010371,5.41e-08,73 | |||
|phase1_expression=5.44506080156299,9.77131141390211,5.0049916332849,16.6355316218757,18.0322462780685,4.8684988854448,6.07392865548367,1.42035655785734,0.422366166455,0.468129052643987,5.65019295144166,3.98860794976682,1.36960583944965,0.961624426608971,7.66152452176024,7.08663435864391,4.19737126876888,2.36596624018678,2.60517423850904,2.97072756258621,5.44277056966847,5.85816612085223,7.05239430675126,4.95976510659561,7.34109699414944,10.9104073181854,7.32295393470427,4.95583835177545,10.4512880701006,6.80481350351813,4.21287970245079,9.52546010189447,17.8368788399525,15.8481681015439,7.79899373328441,7.31432439577366,7.35009682544529,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0.971020706062307,1.88845226963366,1.11514624341466,4.03802854755699,3.12956537739216,9.3750817243592,5.4921545683618,8.94377535741704,14.5585878490377,15.8127820801469,1.17447824240415,2.90144856804538,1.34437519656986,8.48956138918625,7.16333599846892,3.6097046459421,20.8385954685386,19.5726662330652,25.9870875437533,7.45457970552091,7.11435836888911,1.3498495759221,4.94433181283487,2.1314403448383,1.79760066311043,1.53687322128622,12.3390638647088,9.72042755988173,11.1472229516232,13.7112472513826,12.1477697523387,10.1667363348412,11.8848384062613,7.35375029288017,27.5289702498472,14.939418555967,12.4421291937557,24.5308495178161,24.8846390598554,24.4829284161677,11.1673199600552,15.1945904708554,16.1966142643419,21.5078867395777,19.0778052270798,16.5895506784518,3.10477392666055,4.30757892608677,3.76823835312181,8.60423876981386,5.439770669662,14.0322829825832,12.9955283489534,17.9210754838934,5.61777680527007,4.94247935476367,7.53379413348319,6.71345191569646,5.0703631119605,5.13305909657271,15.2883143823987,21.3320010945999,4.97929394325792,4.81383744402687,8.59391556525132,9.81981365583916,2.33044095282455,4.60170631100957,6.93941307064543,3.95805121805784,4.15107895060905,4.06951129492081,4.70354828542819,10.8073268543521,0.741584903203122,11.5679485535929,5.30766331169925,2.91180329905337,2.65009822152472,5.33362778448744,3.72783522436244,7.02673912827713,6.0739544975902,10.4737392635522,3.47463861067169,5.39912457894067,2.79554499560742,9.13722900369418,8.23501085073528,11.6858547464964,8.8650403298061,6.39288643325826,8.93488591606108,8.11206315338788,5.70300437561771,6.34475550111474,3.79084137650512,3.99839526184301,7.80722657776222,6.43725892413724,8.10279584124071,5.72678307775717,5.3748834329549,5.38077625196369,4.8724896771059,3.88055056108524,5.82033580918674,4.72765200419548,4.39877810409872,1.7535658594206,3.33656699070717,2.089512999133,2.67516777330327,5.37392520409932,4.21327912387941,6.43369767786788,4.54661599032948,3.93538967817454,4.22146907965973,2.16074473753218,3.07768156260773,2.36117078096885,2.77680803197281,3.0229412817553,1.07309360559848,2.21854150497622,1.48103864922132,2.13417703302824,1.62137619091711,1.75439984910399,2.63460138349261,1.34206418760372,6.51898840548794,12.7601719350313,9.25172592354634,9.25576983322405,2.34617075588757,6.27039014023184,5.67016829817211,9.07575860805041,4.00280478920767,4.75564065281398,7.59246498471219,3.78807595865225,3.2673577144035,4.57599885694647,3.31438948102504,2.69645822596266,7.78096979548899,9.35963984295526,5.69003702859245,7.5404018322421,5.63538678365402,7.94240178596726,10.2794818198842,12.6945834001477,9.86489979138414,13.2849133181642,13.6588893221996,12.9567022117891,5.63259991465583,7.17433954579204,6.6830058338489,6.07127703439105,6.28866376304359,5.788251834058,5.34714288740982,5.4662266115654,10.8630601939274,7.13859674289012,5.75072826109418,4.46569137202204,5.30464044294753,5.05157755894223,7.53469136792031,13.5084185981743,1.84753190166605,3.03186258832776,4.23708938749267,4.75286240170527,3.52035372432753,2.68010011906905,2.85652369063216,2.34160377429359,3.31033802623001,1.10732344824387,1.2756381492599,0.983179888294428,1.72684981865896,2.89298117163023,0,1.08781136763742,3.44234991113325,4.41498794087572,3.69266356971921,3.98519734413491,4.91804836130026,3.53459298086122,11.9893123378178,1.95219372148319,6.46270193198397,6.69112634267146,3.34198011123591,6.22768367735431,5.26253912177363,4.9683495844923,5.53402889125133,12.2102100240287,4.11626247103979,4.27357448801413,4.88660878060728,3.79431282836832,22.5666735177937,6.31229654002952,9.37203026590728,9.9960692270626,9.15435867930396,8.60818414242997,6.97756391554197,6.18007340111759,7.12994756769443,10.7452497698177,16.8669773719998,9.28219889233682,5.7874732978144,7.92268813737765,5.56242340265844,7.71613326113732,5.49754724291048,4.10248280484762,4.11372551505302,5.48036908406279,3.52007562095566,1.48282449604674,3.96951116498931,1.81374878235628,5.00539722757307,3.67908842061751,3.46179797609096,2.62625439592098,6.41257840585672,3.33765543618917,5.29699730473343,4.12773735926445,4.62986318424279,3.57900068308913,5.74115756428306,3.88922894451088,1.5298058699447,3.21888340344413,2.76399947608848,4.77335309007557,6.01038387804157,4.26970880966382,4.42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| ||
|short_description=p2@Sfxn1 | |short_description=p2@Sfxn1 | ||
}} | }} |
Revision as of 03:17, 15 November 2012
Short description: | p2@Sfxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sfxn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021930, NM_027324, uc007qoa.2_5end |
EntrezGene: | Sfxn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.33e-14 | 23 |
neuron | 3.84e-11 | 33 |
neuronal stem cell | 3.84e-11 | 33 |
neuroblast | 3.84e-11 | 33 |
electrically signaling cell | 3.84e-11 | 33 |
embryonic cell | 4.57e-11 | 70 |
neural cell | 2.16e-09 | 43 |
ectodermal cell | 3.16e-09 | 44 |
neurectodermal cell | 3.16e-09 | 44 |
electrically responsive cell | 8.80e-09 | 39 |
electrically active cell | 8.80e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.46e-13 | 73 |
regional part of nervous system | 3.31e-13 | 54 |
nervous system | 8.38e-13 | 75 |
gray matter | 1.05e-12 | 34 |
neural tube | 4.45e-11 | 52 |
neural rod | 4.45e-11 | 52 |
future spinal cord | 4.45e-11 | 52 |
neural keel | 4.45e-11 | 52 |
neurectoderm | 1.74e-10 | 64 |
neural plate | 1.74e-10 | 64 |
presumptive neural plate | 1.74e-10 | 64 |
anterior neural tube | 6.33e-10 | 40 |
brain grey matter | 7.20e-10 | 29 |
regional part of telencephalon | 7.20e-10 | 29 |
telencephalon | 7.20e-10 | 29 |
regional part of forebrain | 1.31e-09 | 39 |
forebrain | 1.31e-09 | 39 |
future forebrain | 1.31e-09 | 39 |
brain | 1.80e-09 | 47 |
future brain | 1.80e-09 | 47 |
ectoderm-derived structure | 1.81e-09 | 95 |
ectoderm | 1.81e-09 | 95 |
presumptive ectoderm | 1.81e-09 | 95 |
pre-chordal neural plate | 2.92e-09 | 49 |
regional part of brain | 4.88e-09 | 46 |
ecto-epithelium | 5.41e-08 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.