FFCP PHASE1:Hg19::chr8:42358653..42358670,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!4.47e-09!43;CL:0002251!1.27e-07!21;CL:0000223!4.70e-07!59;CL:0000622!8.39e-07!5 | |ontology_enrichment_celltype=CL:0002076!4.47e-09!43;CL:0002251!1.27e-07!21;CL:0000223!4.70e-07!59;CL:0000622!8.39e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.05e-14;14!CL:0000622;1.18e-14;5!CL:0000154;3.78e-12;6!CL:0000244;4.41e-11;4!CL:0000731;4.41e-11;4!CL:0002251;3.80e-10;20!CL:0002623;1.36e-09;3!CL:0000150;5.80e-08;9!CL:0000240;8.26e-08;6!CL:0000311;8.26e-08;6!CL:0000079;8.26e-08;6!CL:0000237;8.26e-08;6!CL:0000362;1.01e-07;9!CL:0002076;2.86e-07;42!CL:0000317;9.65e-07;2!CL:1000448;9.65e-07;2!CL:0002308;9.65e-07;2!CL:0002140;9.65e-07;2 | |ontology_enrichment_celltype_v019=CL:0002159;1.05e-14;14!CL:0000622;1.18e-14;5!CL:0000154;3.78e-12;6!CL:0000244;4.41e-11;4!CL:0000731;4.41e-11;4!CL:0002251;3.80e-10;20!CL:0002623;1.36e-09;3!CL:0000150;5.80e-08;9!CL:0000240;8.26e-08;6!CL:0000311;8.26e-08;6!CL:0000079;8.26e-08;6!CL:0000237;8.26e-08;6!CL:0000362;1.01e-07;9!CL:0002076;2.86e-07;42!CL:0000317;9.65e-07;2!CL:1000448;9.65e-07;2!CL:0002308;9.65e-07;2!CL:0002140;9.65e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.09e-14,14;CL:0000622,1.41e-14,5;CL:0000154,4.38e-12,6;CL:0000244,2.03e-11,4;CL:0000731,2.03e-11,4;CL:0002251,3.54e-10,20;CL:0002623,1.35e-09,3;CL:0002076,1.69e-08,42;CL:0000240,6.26e-08,6;CL:0000311,6.26e-08,6;CL:0000079,6.26e-08,6;CL:0000237,6.26e-08,6;CL:0000036,6.26e-08,6;CL:0000357,6.26e-08,6;CL:0000114,6.26e-08,6;CL:0000150,6.38e-08,9;CL:0000362,9.11e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;8.26e-08;6!CL:0000114;8.26e-08;6!UBERON:0005062;7.35e-07;4!UBERON:0007284;7.35e-07;4 | |ontology_enrichment_development_v019=CL:0000357;8.26e-08;6!CL:0000114;8.26e-08;6!UBERON:0005062;7.35e-07;4!UBERON:0007284;7.35e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.55e-07;2 | |ontology_enrichment_disease_v019=DOID:114;7.55e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,4.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.97e-29!115;UBERON:0004121!4.52e-15!169;UBERON:0000924!3.32e-14!173;UBERON:0006601!3.32e-14!173;UBERON:0001049!7.33e-13!57;UBERON:0005068!7.33e-13!57;UBERON:0006241!7.33e-13!57;UBERON:0007135!7.33e-13!57;UBERON:0000153!7.21e-12!129;UBERON:0007811!7.21e-12!129;UBERON:0003075!2.76e-11!86;UBERON:0007284!2.76e-11!86;UBERON:0000475!5.69e-11!365;UBERON:0000033!6.11e-11!123;UBERON:0002346!3.27e-10!90;UBERON:0000468!6.37e-10!659;UBERON:0003076!1.57e-09!15;UBERON:0003057!1.57e-09!15;UBERON:0002616!3.22e-09!59;UBERON:0000073!3.34e-09!94;UBERON:0001016!3.34e-09!94;UBERON:0001017!3.90e-09!82;UBERON:0005743!5.84e-09!86;UBERON:0000467!1.33e-08!625;UBERON:0000480!1.63e-08!626;UBERON:0000062!1.89e-08!511;UBERON:0000064!4.15e-08!219;UBERON:0004111!4.45e-08!241;UBERON:0004732!6.57e-08!13;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0000483!1.56e-07!309;UBERON:0000119!1.57e-07!312;UBERON:0004733!4.70e-07!12;UBERON:0002028!4.70e-07!12;UBERON:0007277!4.70e-07!12;UBERON:0000166!5.05e-07!21 | |ontology_enrichment_uberon=UBERON:0007023!5.97e-29!115;UBERON:0004121!4.52e-15!169;UBERON:0000924!3.32e-14!173;UBERON:0006601!3.32e-14!173;UBERON:0001049!7.33e-13!57;UBERON:0005068!7.33e-13!57;UBERON:0006241!7.33e-13!57;UBERON:0007135!7.33e-13!57;UBERON:0000153!7.21e-12!129;UBERON:0007811!7.21e-12!129;UBERON:0003075!2.76e-11!86;UBERON:0007284!2.76e-11!86;UBERON:0000475!5.69e-11!365;UBERON:0000033!6.11e-11!123;UBERON:0002346!3.27e-10!90;UBERON:0000468!6.37e-10!659;UBERON:0003076!1.57e-09!15;UBERON:0003057!1.57e-09!15;UBERON:0002616!3.22e-09!59;UBERON:0000073!3.34e-09!94;UBERON:0001016!3.34e-09!94;UBERON:0001017!3.90e-09!82;UBERON:0005743!5.84e-09!86;UBERON:0000467!1.33e-08!625;UBERON:0000480!1.63e-08!626;UBERON:0000062!1.89e-08!511;UBERON:0000064!4.15e-08!219;UBERON:0004111!4.45e-08!241;UBERON:0004732!6.57e-08!13;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0000483!1.56e-07!309;UBERON:0000119!1.57e-07!312;UBERON:0004733!4.70e-07!12;UBERON:0002028!4.70e-07!12;UBERON:0007277!4.70e-07!12;UBERON:0000166!5.05e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.49e-12;6!UBERON:0000165;1.97e-10;28!UBERON:0004151;1.42e-09;3!UBERON:0003978;5.03e-09;3!UBERON:0000946;5.03e-09;3!UBERON:0000365;7.12e-09;5!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0007100;6.50e-08;25!UBERON:0003343;1.87e-07;4!UBERON:0004785;1.87e-07;4!UBERON:0005910;2.13e-07;6!UBERON:0005090;2.31e-07;2!UBERON:0001630;2.31e-07;2!UBERON:0000341;5.32e-07;2!UBERON:0000153;5.44e-07;54!UBERON:0007811;8.31e-07;52!UBERON:0010313;9.25e-07;10!UBERON:0002419;9.65e-07;2!UBERON:0007771;9.65e-07;2!UBERON:0002081;9.65e-07;2!UBERON:0002133;9.65e-07;2!UBERON:0003297;9.65e-07;2!UBERON:0001821;9.65e-07;2!UBERON:0003487;9.65e-07;2!UBERON:0001820;9.65e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000974;1.49e-12;6!UBERON:0000165;1.97e-10;28!UBERON:0004151;1.42e-09;3!UBERON:0003978;5.03e-09;3!UBERON:0000946;5.03e-09;3!UBERON:0000365;7.12e-09;5!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0007100;6.50e-08;25!UBERON:0003343;1.87e-07;4!UBERON:0004785;1.87e-07;4!UBERON:0005910;2.13e-07;6!UBERON:0005090;2.31e-07;2!UBERON:0001630;2.31e-07;2!UBERON:0000341;5.32e-07;2!UBERON:0000153;5.44e-07;54!UBERON:0007811;8.31e-07;52!UBERON:0010313;9.25e-07;10!UBERON:0002419;9.65e-07;2!UBERON:0007771;9.65e-07;2!UBERON:0002081;9.65e-07;2!UBERON:0002133;9.65e-07;2!UBERON:0003297;9.65e-07;2!UBERON:0001821;9.65e-07;2!UBERON:0003487;9.65e-07;2!UBERON:0001820;9.65e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.64e-13,62;UBERON:0007811,2.64e-13,62;UBERON:0000166,2.00e-11,22;UBERON:0000033,1.51e-10,56;UBERON:0003102,3.21e-10,99;UBERON:0000974,4.11e-10,10;UBERON:0000165,5.97e-10,29;UBERON:0000930,5.97e-10,29;UBERON:0001444,1.22e-09,49;UBERON:0004151,1.27e-09,3;UBERON:0000365,3.87e-09,5;UBERON:0004121,3.96e-09,171;UBERON:0000924,3.96e-09,171;UBERON:0006601,3.96e-09,171;UBERON:0003978,6.40e-09,3;UBERON:0009751,6.40e-09,3;UBERON:0000946,6.40e-09,3;UBERON:0002523,6.40e-09,3;UBERON:0005983,6.40e-09,3;UBERON:0002165,6.40e-09,3;UBERON:0002062,6.40e-09,3;UBERON:0007280,6.40e-09,3;UBERON:0007023,2.99e-08,114;UBERON:0005910,1.29e-07,6;UBERON:0003343,2.03e-07,4;UBERON:0004785,2.03e-07,4;UBERON:0005090,2.46e-07,2;UBERON:0001630,2.46e-07,2;UBERON:0007100,3.01e-07,27;UBERON:0000341,4.22e-07,2;UBERON:0003103,4.44e-07,68;UBERON:0001004,4.74e-07,74;UBERON:0002081,9.02e-07,2;UBERON:0010227,9.02e-07,2;UBERON:0002133,9.28e-07,2;UBERON:0008814,9.94e-07,18 | |||
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| ||
|short_description=p10@SLC20A2 | |short_description=p10@SLC20A2 | ||
}} | }} |
Revision as of 01:08, 16 November 2012
Short description: | p10@SLC20A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SLC20A2_5end |
Coexpression cluster: | C4755_heart_oral_salivary_cervical_Mammary_Keratinocyte_skeletal |
Association with transcript: | 307bp_to_ENST00000520262, uc010lxl.2_5end |
EntrezGene: | SLC20A2 |
HGNC: | 10947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.09e-14 | 14 |
acinar cell | 1.41e-14 | 5 |
protein secreting cell | 4.38e-12 | 6 |
transitional epithelial cell | 2.03e-11 | 4 |
urothelial cell | 2.03e-11 | 4 |
epithelial cell of alimentary canal | 3.54e-10 | 20 |
acinar cell of salivary gland | 1.35e-09 | 3 |
endo-epithelial cell | 1.69e-08 | 42 |
stratified squamous epithelial cell | 6.26e-08 | 6 |
keratin accumulating cell | 6.26e-08 | 6 |
stratified epithelial cell | 6.26e-08 | 6 |
keratinizing barrier epithelial cell | 6.26e-08 | 6 |
epithelial fate stem cell | 6.26e-08 | 6 |
stratified epithelial stem cell | 6.26e-08 | 6 |
surface ectodermal cell | 6.26e-08 | 6 |
glandular epithelial cell | 6.38e-08 | 9 |
epidermal cell | 9.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.64e-13 | 62 |
craniocervical region | 2.64e-13 | 62 |
oral opening | 2.00e-11 | 22 |
head | 1.51e-10 | 56 |
surface structure | 3.21e-10 | 99 |
neck | 4.11e-10 | 10 |
mouth | 5.97e-10 | 29 |
stomodeum | 5.97e-10 | 29 |
subdivision of head | 1.22e-09 | 49 |
cardiac chamber | 1.27e-09 | 3 |
urothelium | 3.87e-09 | 5 |
ectoderm-derived structure | 3.96e-09 | 171 |
ectoderm | 3.96e-09 | 171 |
presumptive ectoderm | 3.96e-09 | 171 |
valve | 6.40e-09 | 3 |
cardiac mesenchyme | 6.40e-09 | 3 |
cardial valve | 6.40e-09 | 3 |
tunica intima | 6.40e-09 | 3 |
heart layer | 6.40e-09 | 3 |
endocardium | 6.40e-09 | 3 |
endocardial cushion | 6.40e-09 | 3 |
presumptive endocardium | 6.40e-09 | 3 |
adult organism | 2.99e-08 | 114 |
transitional epithelium | 1.29e-07 | 6 |
mucosa of oral region | 2.03e-07 | 4 |
respiratory system mucosa | 2.03e-07 | 4 |
muscle structure | 2.46e-07 | 2 |
muscle organ | 2.46e-07 | 2 |
primary circulatory organ | 3.01e-07 | 27 |
throat | 4.22e-07 | 2 |
compound organ | 4.44e-07 | 68 |
respiratory system | 4.74e-07 | 74 |
cardiac atrium | 9.02e-07 | 2 |
future cardiac atrium | 9.02e-07 | 2 |
atrioventricular valve | 9.28e-07 | 2 |
pharyngeal arch system | 9.94e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.61e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.