FFCP PHASE1:Hg19::chr14:60975914..60975925,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000064!1.35e-26!3;CL:0005012!1.35e-26!3;CL:0000067!1.35e-26!3;CL:0002304!1.35e-26!3;CL:0002322!1.75e-26!5;CL:0000075!4.27e-19!27;CL:0000710!8.67e-15!20;CL:0000133!8.12e-10!59;CL:0000147!1.19e-09!14;CL:0000306!1.31e-09!4;CL:0002222!1.31e-09!4;CL:0002224!1.31e-09!4;CL:0000342!1.48e-09!1;CL:0002565!1.48e-09!1;CL:0002077!8.93e-09!33;CL:0000148!5.25e-08!10;CL:0000541!5.25e-08!10;CL:0000221!5.48e-08!71;CL:0000325!2.82e-07!39 | |ontology_enrichment_celltype=CL:0000064!1.35e-26!3;CL:0005012!1.35e-26!3;CL:0000067!1.35e-26!3;CL:0002304!1.35e-26!3;CL:0002322!1.75e-26!5;CL:0000075!4.27e-19!27;CL:0000710!8.67e-15!20;CL:0000133!8.12e-10!59;CL:0000147!1.19e-09!14;CL:0000306!1.31e-09!4;CL:0002222!1.31e-09!4;CL:0002224!1.31e-09!4;CL:0000342!1.48e-09!1;CL:0002565!1.48e-09!1;CL:0002077!8.93e-09!33;CL:0000148!5.25e-08!10;CL:0000541!5.25e-08!10;CL:0000221!5.48e-08!71;CL:0000325!2.82e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000064;9.52e-55;3!CL:0000067;9.52e-55;3!CL:0005012;9.52e-55;3!CL:0002304;9.52e-55;3!CL:0000075;6.27e-24;27!CL:0000306;4.49e-19;4!CL:0002222;4.49e-19;4!CL:0002224;4.49e-19;4!CL:0000710;8.26e-15;20!CL:0002077;8.45e-09;34 | |ontology_enrichment_celltype_v019=CL:0000064;9.52e-55;3!CL:0000067;9.52e-55;3!CL:0005012;9.52e-55;3!CL:0002304;9.52e-55;3!CL:0000075;6.27e-24;27!CL:0000306;4.49e-19;4!CL:0002222;4.49e-19;4!CL:0002224;4.49e-19;4!CL:0000710;8.26e-15;20!CL:0002077;8.45e-09;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.24e-55,3;CL:0000067,7.24e-55,3;CL:0005012,7.24e-55,3;CL:0002304,7.24e-55,3;CL:0000075,5.91e-24,27;CL:0000306,3.92e-19,4;CL:0002222,3.92e-19,4;CL:0002224,3.92e-19,4;CL:0000710,8.27e-15,20;CL:0002077,7.54e-09,34 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.06e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;3.06e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.29e-34!4;UBERON:0007625!1.35e-27!11;UBERON:0001778!1.35e-26!3;UBERON:0001775!1.35e-26!3;UBERON:0000970!2.57e-26!20;UBERON:0002104!5.13e-25!21;UBERON:0002203!5.09e-23!6;UBERON:0001768!5.09e-23!6;UBERON:0000020!9.37e-23!23;UBERON:0001032!9.15e-22!24;UBERON:0004456!9.15e-22!24;UBERON:0001801!1.34e-21!14;UBERON:0000019!2.70e-21!19;UBERON:0000047!2.70e-21!19;UBERON:0004088!2.70e-21!19;UBERON:0003072!2.70e-21!19;UBERON:0003071!2.70e-21!19;UBERON:0004128!2.70e-21!19;UBERON:0001456!3.37e-19!21;UBERON:0000007!3.45e-18!2;UBERON:0005085!1.07e-13!29;UBERON:0002200!1.16e-12!11;UBERON:0006876!1.16e-12!11;UBERON:0003056!4.13e-12!61;UBERON:0003075!6.47e-10!86;UBERON:0007284!6.47e-10!86;UBERON:0010077!1.31e-09!4;UBERON:0005389!1.31e-09!4;UBERON:0000484!1.31e-09!4;UBERON:0002546!1.31e-09!4;UBERON:0000965!1.31e-09!4;UBERON:0001803!1.31e-09!4;UBERON:0003073!1.31e-09!4;UBERON:0005426!1.31e-09!4;UBERON:0002506!1.48e-09!1;UBERON:0001769!1.48e-09!1;UBERON:0003296!1.49e-09!4;UBERON:0010133!1.49e-09!4;UBERON:0002346!2.12e-09!90;UBERON:0002363!2.46e-09!1;UBERON:0007647!2.46e-09!1;UBERON:0010115!2.46e-09!1;UBERON:0002902!2.67e-09!1;UBERON:0009899!2.67e-09!1;UBERON:0001444!5.80e-08!48;UBERON:0000013!1.36e-07!5;UBERON:0002410!1.36e-07!5;UBERON:0004121!4.25e-07!169;UBERON:0000924!7.01e-07!173;UBERON:0006601!7.01e-07!173 | |ontology_enrichment_uberon=UBERON:0000488!2.29e-34!4;UBERON:0007625!1.35e-27!11;UBERON:0001778!1.35e-26!3;UBERON:0001775!1.35e-26!3;UBERON:0000970!2.57e-26!20;UBERON:0002104!5.13e-25!21;UBERON:0002203!5.09e-23!6;UBERON:0001768!5.09e-23!6;UBERON:0000020!9.37e-23!23;UBERON:0001032!9.15e-22!24;UBERON:0004456!9.15e-22!24;UBERON:0001801!1.34e-21!14;UBERON:0000019!2.70e-21!19;UBERON:0000047!2.70e-21!19;UBERON:0004088!2.70e-21!19;UBERON:0003072!2.70e-21!19;UBERON:0003071!2.70e-21!19;UBERON:0004128!2.70e-21!19;UBERON:0001456!3.37e-19!21;UBERON:0000007!3.45e-18!2;UBERON:0005085!1.07e-13!29;UBERON:0002200!1.16e-12!11;UBERON:0006876!1.16e-12!11;UBERON:0003056!4.13e-12!61;UBERON:0003075!6.47e-10!86;UBERON:0007284!6.47e-10!86;UBERON:0010077!1.31e-09!4;UBERON:0005389!1.31e-09!4;UBERON:0000484!1.31e-09!4;UBERON:0002546!1.31e-09!4;UBERON:0000965!1.31e-09!4;UBERON:0001803!1.31e-09!4;UBERON:0003073!1.31e-09!4;UBERON:0005426!1.31e-09!4;UBERON:0002506!1.48e-09!1;UBERON:0001769!1.48e-09!1;UBERON:0003296!1.49e-09!4;UBERON:0010133!1.49e-09!4;UBERON:0002346!2.12e-09!90;UBERON:0002363!2.46e-09!1;UBERON:0007647!2.46e-09!1;UBERON:0010115!2.46e-09!1;UBERON:0002902!2.67e-09!1;UBERON:0009899!2.67e-09!1;UBERON:0001444!5.80e-08!48;UBERON:0000013!1.36e-07!5;UBERON:0002410!1.36e-07!5;UBERON:0004121!4.25e-07!169;UBERON:0000924!7.01e-07!173;UBERON:0006601!7.01e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;9.52e-55;3!UBERON:0001775;9.52e-55;3!UBERON:0000970;9.87e-44;20!UBERON:0002104;1.20e-41;21!UBERON:0000488;2.71e-41;4!UBERON:0007625;4.22e-41;11!UBERON:0000020;5.08e-38;23!UBERON:0000007;6.83e-37;2!UBERON:0001032;1.96e-36;24!UBERON:0004456;1.96e-36;24!UBERON:0000019;5.53e-34;19!UBERON:0000047;5.53e-34;19!UBERON:0004088;5.53e-34;19!UBERON:0010230;5.53e-34;19!UBERON:0001801;2.31e-32;14!UBERON:0001456;9.37e-31;21!UBERON:0002203;8.14e-28;6!UBERON:0001768;8.14e-28;6!UBERON:0002200;8.14e-28;6!UBERON:0010077;4.49e-19;4!UBERON:0005389;4.49e-19;4!UBERON:0000484;4.49e-19;4!UBERON:0000965;4.49e-19;4!UBERON:0001803;4.49e-19;4!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0006876;1.64e-15;11!UBERON:0010371;1.07e-14;31!UBERON:0001894;2.69e-11;7!UBERON:0001444;2.18e-09;48!UBERON:0000033;8.20e-08;50!UBERON:0000153;2.81e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0001778;9.52e-55;3!UBERON:0001775;9.52e-55;3!UBERON:0000970;9.87e-44;20!UBERON:0002104;1.20e-41;21!UBERON:0000488;2.71e-41;4!UBERON:0007625;4.22e-41;11!UBERON:0000020;5.08e-38;23!UBERON:0000007;6.83e-37;2!UBERON:0001032;1.96e-36;24!UBERON:0004456;1.96e-36;24!UBERON:0000019;5.53e-34;19!UBERON:0000047;5.53e-34;19!UBERON:0004088;5.53e-34;19!UBERON:0010230;5.53e-34;19!UBERON:0001801;2.31e-32;14!UBERON:0001456;9.37e-31;21!UBERON:0002203;8.14e-28;6!UBERON:0001768;8.14e-28;6!UBERON:0002200;8.14e-28;6!UBERON:0010077;4.49e-19;4!UBERON:0005389;4.49e-19;4!UBERON:0000484;4.49e-19;4!UBERON:0000965;4.49e-19;4!UBERON:0001803;4.49e-19;4!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0006876;1.64e-15;11!UBERON:0010371;1.07e-14;31!UBERON:0001894;2.69e-11;7!UBERON:0001444;2.18e-09;48!UBERON:0000033;8.20e-08;50!UBERON:0000153;2.81e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,7.24e-55,3;UBERON:0001775,7.24e-55,3;UBERON:0000970,1.00e-41,21;UBERON:0002104,1.00e-41,21;UBERON:0000488,2.20e-41,4;UBERON:0007625,3.29e-41,11;UBERON:0000007,6.83e-37,2;UBERON:0000020,1.67e-36,24;UBERON:0001032,1.67e-36,24;UBERON:0004456,1.67e-36,24;UBERON:0001801,1.90e-32,14;UBERON:0000019,2.39e-32,20;UBERON:0000047,2.39e-32,20;UBERON:0010312,2.39e-32,20;UBERON:0004088,2.39e-32,20;UBERON:0010230,2.39e-32,20;UBERON:0003072,2.39e-32,20;UBERON:0004128,2.39e-32,20;UBERON:0003071,2.39e-32,20;UBERON:0001456,2.06e-29,22;UBERON:0002203,7.10e-28,6;UBERON:0001768,7.10e-28,6;UBERON:0002200,7.10e-28,6;UBERON:0005085,7.04e-21,31;UBERON:0010077,3.92e-19,4;UBERON:0005389,3.92e-19,4;UBERON:0000484,3.92e-19,4;UBERON:0002546,3.92e-19,4;UBERON:0000965,3.92e-19,4;UBERON:0001803,3.92e-19,4;UBERON:0003073,3.92e-19,4;UBERON:0005426,3.92e-19,4;UBERON:0003296,5.15e-19,4;UBERON:0010133,5.15e-19,4;UBERON:0003056,3.28e-18,61;UBERON:0006876,1.52e-15,11;UBERON:0003075,1.70e-13,82;UBERON:0007284,1.70e-13,82;UBERON:0001444,3.49e-13,49;UBERON:0002346,7.44e-13,86;UBERON:0000033,1.61e-11,56;UBERON:0001894,2.69e-11,7;UBERON:0006222,2.69e-11,7;UBERON:0010371,1.44e-10,104;UBERON:0000153,2.17e-10,62;UBERON:0007811,2.17e-10,62;UBERON:0000076,4.62e-10,8;UBERON:0010314,3.14e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68685786939865,2.21729397462564,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,1.24393266018445,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,5.10093781890338,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03482802118316,1.59363533945908,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68685786939865,2.21729397462564,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,1.24393266018445,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,5.10093781890338,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03482802118316,1.59363533945908,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SIX6 | |short_description=p5@SIX6 | ||
}} | }} |
Revision as of 23:07, 18 November 2012
Short description: | p5@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -12bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.24e-55 | 3 |
ciliated epithelial cell | 7.24e-55 | 3 |
multi-ciliated epithelial cell | 7.24e-55 | 3 |
non-pigmented ciliary epithelial cell | 7.24e-55 | 3 |
columnar/cuboidal epithelial cell | 5.91e-24 | 27 |
crystallin accumulating cell | 3.92e-19 | 4 |
vertebrate lens cell | 3.92e-19 | 4 |
lens epithelial cell | 3.92e-19 | 4 |
neurecto-epithelial cell | 8.27e-15 | 20 |
ecto-epithelial cell | 7.54e-09 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.