FFCP PHASE1:Hg19::chr12:24715342..24715354,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.51e-32!115;UBERON:0001017!4.68e-21!82;UBERON:0001049!6.69e-21!57;UBERON:0005068!6.69e-21!57;UBERON:0006241!6.69e-21!57;UBERON:0007135!6.69e-21!57;UBERON:0000073!2.80e-20!94;UBERON:0001016!2.80e-20!94;UBERON:0005743!3.14e-20!86;UBERON:0000955!2.21e-19!69;UBERON:0006238!2.21e-19!69;UBERON:0002616!1.43e-18!59;UBERON:0002346!3.38e-17!90;UBERON:0003080!4.38e-17!42;UBERON:0003075!4.64e-17!86;UBERON:0007284!4.64e-17!86;UBERON:0002780!3.20e-16!41;UBERON:0001890!3.20e-16!41;UBERON:0006240!3.20e-16!41;UBERON:0001893!4.13e-16!34;UBERON:0002020!1.17e-15!34;UBERON:0003528!1.17e-15!34;UBERON:0002791!2.35e-15!33;UBERON:0001869!3.74e-15!32;UBERON:0000153!6.20e-14!129;UBERON:0007811!6.20e-14!129;UBERON:0003056!1.35e-13!61;UBERON:0000033!3.90e-13!123;UBERON:0000924!5.44e-13!173;UBERON:0006601!5.44e-13!173;UBERON:0004121!1.06e-12!169;UBERON:0000956!9.49e-12!25;UBERON:0000203!9.49e-12!25;UBERON:0002619!6.73e-10!22;UBERON:0000481!1.38e-08!347;UBERON:0001950!1.64e-08!20;UBERON:0000477!1.02e-07!286;UBERON:0000483!4.59e-07!309;UBERON:0004111!9.21e-07!241;UBERON:0000119!9.52e-07!312;UBERON:0000922!9.81e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!9.51e-32!115;UBERON:0001017!4.68e-21!82;UBERON:0001049!6.69e-21!57;UBERON:0005068!6.69e-21!57;UBERON:0006241!6.69e-21!57;UBERON:0007135!6.69e-21!57;UBERON:0000073!2.80e-20!94;UBERON:0001016!2.80e-20!94;UBERON:0005743!3.14e-20!86;UBERON:0000955!2.21e-19!69;UBERON:0006238!2.21e-19!69;UBERON:0002616!1.43e-18!59;UBERON:0002346!3.38e-17!90;UBERON:0003080!4.38e-17!42;UBERON:0003075!4.64e-17!86;UBERON:0007284!4.64e-17!86;UBERON:0002780!3.20e-16!41;UBERON:0001890!3.20e-16!41;UBERON:0006240!3.20e-16!41;UBERON:0001893!4.13e-16!34;UBERON:0002020!1.17e-15!34;UBERON:0003528!1.17e-15!34;UBERON:0002791!2.35e-15!33;UBERON:0001869!3.74e-15!32;UBERON:0000153!6.20e-14!129;UBERON:0007811!6.20e-14!129;UBERON:0003056!1.35e-13!61;UBERON:0000033!3.90e-13!123;UBERON:0000924!5.44e-13!173;UBERON:0006601!5.44e-13!173;UBERON:0004121!1.06e-12!169;UBERON:0000956!9.49e-12!25;UBERON:0000203!9.49e-12!25;UBERON:0002619!6.73e-10!22;UBERON:0000481!1.38e-08!347;UBERON:0001950!1.64e-08!20;UBERON:0000477!1.02e-07!286;UBERON:0000483!4.59e-07!309;UBERON:0004111!9.21e-07!241;UBERON:0000119!9.52e-07!312;UBERON:0000922!9.81e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.68e-09;34!UBERON:0002780;3.02e-09;41!UBERON:0001890;3.02e-09;41!UBERON:0001869;5.39e-09;32!UBERON:0002619;5.94e-09;22!UBERON:0002791;5.06e-08;32!UBERON:0001950;6.23e-08;20!UBERON:0000956;1.00e-07;25!UBERON:0000203;1.00e-07;25!UBERON:0003528;2.91e-07;34!UBERON:0002020;2.91e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001893;1.68e-09;34!UBERON:0002780;3.02e-09;41!UBERON:0001890;3.02e-09;41!UBERON:0001869;5.39e-09;32!UBERON:0002619;5.94e-09;22!UBERON:0002791;5.06e-08;32!UBERON:0001950;6.23e-08;20!UBERON:0000956;1.00e-07;25!UBERON:0000203;1.00e-07;25!UBERON:0003528;2.91e-07;34!UBERON:0002020;2.91e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.30e-12,41;UBERON:0001890,5.30e-12,41;UBERON:0003080,5.30e-12,41;UBERON:0006240,5.30e-12,41;UBERON:0001893,3.42e-11,34;UBERON:0001869,3.06e-10,32;UBERON:0003056,2.71e-09,61;UBERON:0007023,2.88e-09,114;UBERON:0002619,4.74e-09,22;UBERON:0002791,1.39e-08,32;UBERON:0000073,1.43e-08,53;UBERON:0002616,1.43e-08,53;UBERON:0003528,5.77e-08,34;UBERON:0002020,5.77e-08,34;UBERON:0001049,6.01e-08,56;UBERON:0005068,6.01e-08,56;UBERON:0006241,6.01e-08,56;UBERON:0007135,6.01e-08,56;UBERON:0001950,6.15e-08,20;UBERON:0000955,7.29e-08,68;UBERON:0006238,7.29e-08,68;UBERON:0000956,8.26e-08,25;UBERON:0000203,8.26e-08,25;UBERON:0002346,2.53e-07,86;UBERON:0003075,6.68e-07,82;UBERON:0007284,6.68e-07,82;UBERON:0001017,6.77e-07,81 | |||
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| ||
|short_description=p4@SOX5 | |short_description=p4@SOX5 | ||
}} | }} |
Revision as of 15:53, 19 November 2012
Short description: | p4@SOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SOX5_5end |
Coexpression cluster: | C3268_parietal_temporal_pineal_occipital_gastrointestinal_mature_extraskeletal |
Association with transcript: | 25bp_to_NM_152989, uc001rfx.2, uc001rfy.2_5end |
EntrezGene: | SOX5 |
HGNC: | 11201 |
UniProt: | P35711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 5.30e-12 | 41 |
forebrain | 5.30e-12 | 41 |
anterior neural tube | 5.30e-12 | 41 |
future forebrain | 5.30e-12 | 41 |
telencephalon | 3.42e-11 | 34 |
cerebral hemisphere | 3.06e-10 | 32 |
pre-chordal neural plate | 2.71e-09 | 61 |
adult organism | 2.88e-09 | 114 |
regional part of cerebral cortex | 4.74e-09 | 22 |
regional part of telencephalon | 1.39e-08 | 32 |
regional part of nervous system | 1.43e-08 | 53 |
regional part of brain | 1.43e-08 | 53 |
brain grey matter | 5.77e-08 | 34 |
gray matter | 5.77e-08 | 34 |
neural tube | 6.01e-08 | 56 |
neural rod | 6.01e-08 | 56 |
future spinal cord | 6.01e-08 | 56 |
neural keel | 6.01e-08 | 56 |
neocortex | 6.15e-08 | 20 |
brain | 7.29e-08 | 68 |
future brain | 7.29e-08 | 68 |
cerebral cortex | 8.26e-08 | 25 |
pallium | 8.26e-08 | 25 |
neurectoderm | 2.53e-07 | 86 |
neural plate | 6.68e-07 | 82 |
presumptive neural plate | 6.68e-07 | 82 |
central nervous system | 6.77e-07 | 81 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.