FFCP PHASE1:Hg19::chr10:105615282..105615323,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |||
|TSSclassifier=S | |||
|UniProt=Q5TCZ1 | |||
|association_with_transcript=0bp_to_ENST00000369774_5end | |||
|coexpression_cluster_id=C2976 | |||
|description=CAGE_peak_6_at_SH3PXD2A_5end | |||
|id=chr10:105615282..105615323,- | |||
|ontology_enrichment_celltype=CL:0002076!1.10e-08!43;CL:0000223!2.48e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.55e-08,42;CL:0000223,1.59e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.22e-15!173;UBERON:0006601!2.22e-15!173;UBERON:0004121!1.96e-14!169;UBERON:0007023!4.76e-12!115;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0000033!1.32e-10!123;UBERON:0003102!3.42e-10!95;UBERON:0000467!5.27e-10!625;UBERON:0000475!8.62e-10!365;UBERON:0000468!8.99e-10!659;UBERON:0000480!9.23e-10!626;UBERON:0004119!1.39e-09!169;UBERON:0000925!1.39e-09!169;UBERON:0006595!1.39e-09!169;UBERON:0000064!1.53e-09!219;UBERON:0001049!4.82e-09!57;UBERON:0005068!4.82e-09!57;UBERON:0006241!4.82e-09!57;UBERON:0007135!4.82e-09!57;UBERON:0000062!1.99e-08!511;UBERON:0000922!2.90e-08!612;UBERON:0002050!8.92e-08!605;UBERON:0005423!8.92e-08!605;UBERON:0000481!8.96e-08!347;UBERON:0000161!1.26e-07!35;UBERON:0000923!1.58e-07!604;UBERON:0005291!1.58e-07!604;UBERON:0006598!1.58e-07!604;UBERON:0002532!1.58e-07!604;UBERON:0000165!1.90e-07!28;UBERON:0000930!1.90e-07!28;UBERON:0000166!2.64e-07!21;UBERON:0000483!3.06e-07!309;UBERON:0004111!4.17e-07!241;UBERON:0001004!4.77e-07!72;UBERON:0001017!5.65e-07!82;UBERON:0000073!6.23e-07!94;UBERON:0001016!6.23e-07!94;UBERON:0000119!7.26e-07!312;UBERON:0000955!9.37e-07!69;UBERON:0006238!9.37e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.68e-08;28!UBERON:0000161;8.77e-07;19!UBERON:0000166;8.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.70e-16,171;UBERON:0000924,9.70e-16,171;UBERON:0006601,9.70e-16,171;UBERON:0007023,3.61e-12,114;UBERON:0010371,9.80e-11,104;UBERON:0003102,1.19e-10,99;UBERON:0011216,2.78e-10,223;UBERON:0004119,5.43e-10,160;UBERON:0000925,5.43e-10,160;UBERON:0006595,5.43e-10,160;UBERON:0002050,1.22e-08,564;UBERON:0001049,1.33e-08,56;UBERON:0005068,1.33e-08,56;UBERON:0006241,1.33e-08,56;UBERON:0007135,1.33e-08,56;UBERON:0000073,1.24e-07,53;UBERON:0002616,1.24e-07,53;UBERON:0000923,1.78e-07,560;UBERON:0010316,1.78e-07,560;UBERON:0005291,1.78e-07,560;UBERON:0006598,1.78e-07,560;UBERON:0010317,1.78e-07,560;UBERON:0002532,1.78e-07,560;UBERON:0000165,2.08e-07,29;UBERON:0000930,2.08e-07,29;UBERON:0000166,2.52e-07,22;UBERON:0002346,4.96e-07,86;UBERON:0005423,5.72e-07,581;UBERON:0000161,7.67e-07,36;UBERON:0001004,7.82e-07,74;UBERON:0010314,9.22e-07,132 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,1.34088328328186,0,0,0.631719873426831,0,0.491467873003018,0.697801167972428,4.36882744260345,7.3854753903967,0.990130823680373,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0.984968464614303,1.02000345622126,1.25381888591235,0.286235987131057,0.821246550437305,1.12988375635323,0,0,0.0787107813136792,0,0,1.39334510984468,8.27479102031034,19.277178801808,17.0086844676722,0,0,0,0,0,0,7.83704159839735,9.06902264853143,9.01514486719653,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,1.23360899399706,0.167186495390678,0,0,0,0.334231370655521,1.17842362989935,1.10766947291811,1.35401931882508,0.512365278902701,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,0,0.679856056185397,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0.511450247374121,0.361439152384566,3.50936537445123,0.579386075843295,2.3858578411533,3.40644409211845,0.189069634328136,0,0.087834785693126,2.68507104770311,28.4150324868183,14.8313777113772,0.97364218096405,0.870648686496336,1.46253756570752,0,0,0,0.79504962946682,0.860234595106124,1.04142150482278,0,3.35599548967925,0,0.626984899610432,1.55050055501597,1.06729878806013,0.66944122552934,0.402829317109147,0,1.22031028774085,0.735326160691737,1.62028389576352,0.803697554556718,1.34717623575702,0.675668882899933,3.06633274931766,0.949265659568129,1.83201743930407,0,0,15.2632918249887,0,0.12663051166458,0.926864265692532,0.860509862246441,1.41867352879343,2.24271040056923,0,0.74000264525148,0.933633106199299,0.942974704487816,0.490385709340376,0.756787138224657,0,0.234321431833797,0.624320153660641,1.71141546463335,1.19558944441441,1.87895197830024,4.20869655357142,1.68540968042698,1.83738754129404,2.33385202892359,3.61640234115179,2.37600571456411,1.23633464639278,0.910161361938026,0,3.03005005117319,2.12701483782339,2.21651292387346,1.75591048352335,1.22595118319608,0.45071417671979,0.340296549480063,1.61450672119976,3.84403299873421,1.05965950579781,2.40072876867522,1.64884046781502,1.54584324027377,0.930584281657949,1.68776332241266,0.876933046450788,0.757301322732344,2.30124746605748,2.58633690910099,0.710019185033229,1.81353776809752,1.01736355386293,40.0049966048024,31.6385499885368,49.0435858115197,0.853815942907168,0.795178609928912,0.813357600086629,1.86589899027667,1.00928340350251,0.72995471815166,4.69348596989448,3.21620469096443,5.52539685409922,1.39310378409594,2.16563844500876,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0.38474715694639,2.21446636387394,0,0.4115740113314,0,0,2.94848165003288,2.95394953340702,0,2.21379189377604,0.171567810298526,22.9378096504027,20.2323155863715,16.1851645582726,13.7956783286209,0,4.15973914111831,0,0.34779121492523,0.117408694235822,0.144366447761074,0.925971025153221,0.190254152234598,0,0,2.70838706696137,0.468008530278475,1.63494278517601,29.9948268757686,19.9898732556643,16.3041361828744,13.7024539735358,9.00965209393282,20.3192819957562,0,0,0.207328115540772,0.144119953416961,0.12624243342638,1.07946420296687,3.4378958300245,1.17217447210047,6.84289784090821,4.31875469353959,2.70308752059526,2.5724378936752,0.112131084345361,0.43596006883328,0.07333828582095,0.775630294546667,3.57656445851882,5.071816515336,0.797814349754612,1.04007436911366,1.02882949704857,0,1.3321108950805,0,3.7983512377401,0,2.60588947434988,0,1.58390374586686,0.301439377059586,0.871533458600294,0.399891964728228,0,5.52482800575339,2.10833939483032,0,0,11.4109524032575,1.15825045334063,1.2328579353023,1.79060963239896,0,0,0,0.128343036279748,0.254094624222463,2.60279707715243,3.09315525111078,1.67516265334349,1.27587750330633,0,0,0,0.36807447515742,2.00068208423871,0.813795071099207,0,0.178428988797162,0.157702415033935,0.234282829985426,2.40756879782175,4.5481500811197,3.10419213877515,1.32845119707087,2.21243002250044,2.86715927744673,2.54541504701563,3.77457766191941,0.206768026122887,0,0.106727557803444,6.97193414326397,6.65741758041988,7.86214762657169,0,0.460385919864187,0.561320188866147,0.512556597022804,0,0.482561763430822,1.48418066444991,2.46735510084249,2.30830242907065,1.39616165223476,1.55776328755086,2.20799719073923,3.62578348774867,15.0379852727464,12.6150954842178,0.918515585316854,0.182091168006717,2.09799063935079,0,0.539107359730903,0,0,0.73886140225013,1.13733384070897,2.55140557914773,1.94324324491925,0,0.270946437543853,1.00337954770971,1.27438136522519,0,0.671624264166535,0,0.261435451024901,0,0,0,8.55240396676095,1.55668090191184,1.98022799809411,27.5647458238163,18.2016868890226,0,3.67348729510063,0.770243085573222,0.767518373630648,2.06754858726796,2.57808587683857,1.45016693914229,1.44885266607372,3.73934549716297,10.5782345831026,19.4111968038757,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| |||
|short_description=p6@SH3PXD2A | |||
}} |
Revision as of 11:33, 10 September 2013
Short description: | p6@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SH3PXD2A_5end |
Coexpression cluster: | C2976_Small_Gingival_Urothelial_keratoacanthoma_Keratinocyte_neuroectodermal_Bronchial |
Association with transcript: | 0bp_to_ENST00000369774_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | Q5TCZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.55e-08 | 42 |
endodermal cell | 1.59e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.70e-16 | 171 |
ectoderm | 9.70e-16 | 171 |
presumptive ectoderm | 9.70e-16 | 171 |
adult organism | 3.61e-12 | 114 |
ecto-epithelium | 9.80e-11 | 104 |
surface structure | 1.19e-10 | 99 |
organ system subdivision | 2.78e-10 | 223 |
endoderm-derived structure | 5.43e-10 | 160 |
endoderm | 5.43e-10 | 160 |
presumptive endoderm | 5.43e-10 | 160 |
embryonic structure | 1.22e-08 | 564 |
neural tube | 1.33e-08 | 56 |
neural rod | 1.33e-08 | 56 |
future spinal cord | 1.33e-08 | 56 |
neural keel | 1.33e-08 | 56 |
regional part of nervous system | 1.24e-07 | 53 |
regional part of brain | 1.24e-07 | 53 |
germ layer | 1.78e-07 | 560 |
germ layer / neural crest | 1.78e-07 | 560 |
embryonic tissue | 1.78e-07 | 560 |
presumptive structure | 1.78e-07 | 560 |
germ layer / neural crest derived structure | 1.78e-07 | 560 |
epiblast (generic) | 1.78e-07 | 560 |
mouth | 2.08e-07 | 29 |
stomodeum | 2.08e-07 | 29 |
oral opening | 2.52e-07 | 22 |
neurectoderm | 4.96e-07 | 86 |
developing anatomical structure | 5.72e-07 | 581 |
orifice | 7.67e-07 | 36 |
respiratory system | 7.82e-07 | 74 |
structure with developmental contribution from neural crest | 9.22e-07 | 132 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.