FFCP PHASE1:Hg19::chr10:72645686..72645703,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8646 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000493961_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PCBD1_5end | |||
|id=chr10:72645686..72645703,- | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-15!254;CL:0002321!9.47e-08!248;CL:0000220!1.34e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.60e-14;10!CL:1000494;1.60e-14;10!CL:0000182;3.94e-11;12!CL:1000449;2.74e-09;15!CL:0002681;5.33e-09;12!CL:0002584;5.33e-09;12!CL:1000497;4.65e-08;17!CL:0002518;4.65e-08;17!CL:0000650;1.97e-07;2!CL:1000500;1.97e-07;2!CL:1000618;1.97e-07;2!CL:1001318;1.97e-07;2!CL:0002173;1.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.08e-14,10;CL:1000494,1.08e-14,10;CL:0000223,6.61e-12,58;CL:0000182,3.08e-11,12;CL:1000449,2.13e-09,15;CL:0002681,5.40e-09,12;CL:0002584,5.40e-09,12;CL:0000066,2.42e-08,253;CL:1000497,3.74e-08,17;CL:0002518,3.74e-08,17;CL:0000650,1.76e-07,2;CL:1000500,1.76e-07,2;CL:1000618,1.76e-07,2;CL:1001318,1.76e-07,2;CL:0002173,1.76e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.02e-16;11!UBERON:0009497;3.64e-13;13!UBERON:0003104;1.49e-10;31!UBERON:0001041;1.13e-07;30 | |||
|ontology_enrichment_disease=DOID:305!9.74e-12!106;DOID:0050687!2.86e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!7.35e-15!309;UBERON:0000119!1.98e-14!312;UBERON:0000481!4.40e-14!347;UBERON:0000922!1.04e-12!612;UBERON:0000490!8.04e-12!138;UBERON:0000923!2.20e-11!604;UBERON:0005291!2.20e-11!604;UBERON:0006598!2.20e-11!604;UBERON:0002532!2.20e-11!604;UBERON:0002050!3.37e-11!605;UBERON:0005423!3.37e-11!605;UBERON:0003104!4.17e-11!238;UBERON:0009142!4.17e-11!238;UBERON:0000468!8.47e-11!659;UBERON:0000467!1.43e-10!625;UBERON:0000480!2.16e-10!626;UBERON:0004921!4.66e-10!129;UBERON:0004185!4.66e-10!129;UBERON:0005177!4.27e-09!107;UBERON:0002100!4.87e-09!216;UBERON:0001007!1.01e-08!155;UBERON:0001555!1.01e-08!155;UBERON:0007026!1.01e-08!155;UBERON:0005911!1.26e-08!82;UBERON:0001048!2.00e-08!168;UBERON:0005172!2.26e-08!55;UBERON:0005173!2.26e-08!55;UBERON:0000477!2.42e-08!286;UBERON:0000926!2.87e-08!448;UBERON:0004120!2.87e-08!448;UBERON:0006603!2.87e-08!448;UBERON:0000475!4.32e-08!365;UBERON:0004119!6.51e-08!169;UBERON:0000925!6.51e-08!169;UBERON:0006595!6.51e-08!169;UBERON:0003914!8.99e-08!118;UBERON:0000077!1.06e-07!130;UBERON:0002417!1.97e-07!61;UBERON:0000916!1.97e-07!61;UBERON:0003929!2.02e-07!54;UBERON:0009569!2.57e-07!113;UBERON:0001041!2.86e-07!98;UBERON:0000062!5.79e-07!511;UBERON:0006554!6.11e-07!44;UBERON:0005256!8.75e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.60e-14;10!UBERON:0009773;1.60e-14;10!UBERON:0001231;1.60e-14;10!UBERON:0004810;1.60e-14;10!UBERON:0002107;7.76e-14;19!UBERON:0006925;7.76e-14;19!UBERON:0002423;4.25e-12;25!UBERON:0005172;2.30e-10;52!UBERON:0005173;2.30e-10;52!UBERON:0006555;2.74e-09;15!UBERON:0004819;2.74e-09;15!UBERON:0001285;2.74e-09;15!UBERON:0007684;2.74e-09;15!UBERON:0002365;3.72e-09;31!UBERON:0002330;3.72e-09;31!UBERON:0001225;5.33e-09;12!UBERON:0008987;5.33e-09;12!UBERON:0002368;5.55e-09;33!UBERON:0000949;9.67e-08;43!UBERON:0002417;1.90e-07;58!UBERON:0000916;1.90e-07;58!UBERON:0003567;1.97e-07;2!UBERON:0003838;1.97e-07;2!UBERON:0003586;1.97e-07;2!UBERON:0005169;1.97e-07;2!UBERON:0002321;1.97e-07;2!UBERON:0005215;1.97e-07;2!UBERON:0002303;1.97e-07;2!UBERON:0002319;1.97e-07;2!UBERON:0001851;4.92e-07;15!UBERON:0000353;4.92e-07;15!UBERON:0002113;5.23e-07;24!UBERON:0011143;5.23e-07;24 | |||
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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,5.06599756336621,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.502170558379211,0.152826811495903,0,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.945348171640679,1.10864698731282,0.790513071238134,0.72038491523742,0.728590576585084,0.741568885568859,2.59637914923747,2.43781632218974,1.32957960518865,0,0,0,0.39752481473341,0.860234595106124,1.73570250803797,0.56530794192401,0.419499436209906,1.10047216776027,0.626984899610432,0,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0,0.81014194788176,0.982297011124877,0,0.788280363383256,0,0,0.916008719652036,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,0.311211035399766,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0.600952235626387,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.552299391853796,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0.530119073285941,0.232387885739037,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.949082476444386,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0.8231480226628,1.47008711385542,15.2106041786197,0.982827216677626,6.49868897349544,0,1.72183813960359,0.343135620597051,0.548751427043128,0,0.201057944823262,0.555530670951178,0,0,0,0.811512834825538,0.469634776943287,0.144366447761074,0,0.570762456703795,0,0,0.738651018262192,0.468008530278475,0.891786973732369,0,0,0,0.0895585227028483,0,0.766765358330422,0,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0.387815147273333,0,0.845302752556,0.797814349754612,0,0,1.41849132023278,0.266422179016099,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0.116210378459959,2.90062679019893,2.20557117333613,0.184161977871793,1.14814448164607,0.182091168006717,1.44236856455367,3.15839729035188,2.15642943892361,0,0,1.79437769117889,0,0.170093705276516,0,0,2.98041081298238,3.01013864312912,2.80363900349542,0.831076008928724,2.0148727924996,0,0,2.56450125116389,0.984043937099117,1.30151357865721,5.15205058238611,0.183138929636687,0.082509499920588,0.574265537996172,1.30012049207304,0,0.580024309752732,0,0.15350367472613,0,0.322260734604821,0.580066775656914,0.767039646744908,0.712256285173899,0.330569830721956,0,0,0.4046311234222,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.571890581771475,0.767693373934002,0,0,0,0.359744915166629,0.274537029736055,0.706874414074119,0.202182481573316,0,0,1.46290121726877,0.731140468893853,0,0.136499911407986,0.707027159768564,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0.430234056612155,0.491245205065606,1.07001315444375,0.354761064070598,0.422215270595328,0,0.75894634753143,0.699869440489966,0,0.670302275535787,0,5.64862804660675,1.72202149068492,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0.403599414382095,0.425846237690326,0.343505344755765,0,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0.111443384277478,1.70481688083848,0,0,0.307160702099232,0,0.422008249231538,0,0.329607748453519,0,0.19924798825107,0,1.76352923497993,0.20453736500431,0.123084805461069,0.933118762985422,0.988551862620595,0.716084698702437,0.511572370226872,0.197286811273867,0,0,0,0.463840490809256,0,1.30213880542617,0.349839999984783,0,0.682760689712998,0,1.41832609060762,0.344743373241465,0,0.694499979733169,0,0,0,0,0,1.09692698576986,0.435753854075961,0,0,0.113942055847001,0,0.269272933229316,0.21729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| |||
|short_description=p3@PCBD1 | |||
}} |
Revision as of 14:12, 10 September 2013
Short description: | p3@PCBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PCBD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -30bp_to_ENST00000493961_5end |
EntrezGene: | PCBD1 |
HGNC: | 8646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.08e-14 | 10 |
nephron tubule epithelial cell | 1.08e-14 | 10 |
endodermal cell | 6.61e-12 | 58 |
hepatocyte | 3.08e-11 | 12 |
epithelial cell of nephron | 2.13e-09 | 15 |
kidney cortical cell | 5.40e-09 | 12 |
renal cortical epithelial cell | 5.40e-09 | 12 |
epithelial cell | 2.42e-08 | 253 |
kidney cell | 3.74e-08 | 17 |
kidney epithelial cell | 3.74e-08 | 17 |
mesangial cell | 1.76e-07 | 2 |
kidney interstitial cell | 1.76e-07 | 2 |
juxtaglomerular complex cell | 1.76e-07 | 2 |
renal interstitial pericyte | 1.76e-07 | 2 |
extraglomerular mesangial cell | 1.76e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.