FFCP PHASE1:Hg19::chr12:97856637..97856647,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1023|description=CAGE_peak_at_chr12:97856637..97856647,+|id=chr12:97856637..97856647,+|ontology_enrichment_celltype=CL:0000064!5.62e-10!3;CL:0005012!5.62e-10!3;CL:0000067!5.62e-10!3;CL:0002304!5.62e-10!3;CL:0002322!5.83e-09!5|ontology_enrichment_celltype_v019=CL:0000064;2.20e-16;3!CL:0000067;2.20e-16;3!CL:0005012;2.20e-16;3!CL:0002304;2.20e-16;3|ontology_enrichment_celltype_v019_2=CL:0000064,1.88e-16,3;CL:0000067,1.88e-16,3;CL:0005012,1.88e-16,3;CL:0002304,1.88e-16,3|ontology_enrichment_development_v019=UBERON:0006241;3.81e-35;3!UBERON:0003057;3.81e-35;3!UBERON:0007297;3.44e-25;2!UBERON:0005754;1.71e-13;1!UBERON:0007123;2.19e-10;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;4.29e-07;2!DOID:4236;4.29e-07;2|ontology_enrichment_disease_v019_2=DOID:154,4.69e-07,2;DOID:4236,4.69e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.87e-38!115;UBERON:0001049!2.12e-38!57;UBERON:0005068!2.12e-38!57;UBERON:0006241!2.12e-38!57;UBERON:0007135!2.12e-38!57;UBERON:0003075!5.08e-35!86;UBERON:0007284!5.08e-35!86;UBERON:0002346!4.91e-33!90;UBERON:0002616!7.79e-29!59;UBERON:0005743!7.80e-28!86;UBERON:0001017!1.62e-27!82;UBERON:0000955!4.45e-27!69;UBERON:0006238!4.45e-27!69;UBERON:0003056!1.24e-25!61;UBERON:0000153!1.49e-25!129;UBERON:0007811!1.49e-25!129;UBERON:0000073!2.13e-24!94;UBERON:0001016!2.13e-24!94;UBERON:0000033!5.55e-24!123;UBERON:0002780!2.84e-23!41;UBERON:0001890!2.84e-23!41;UBERON:0006240!2.84e-23!41;UBERON:0003080!1.33e-22!42;UBERON:0004121!3.23e-18!169;UBERON:0003076!5.50e-18!15;UBERON:0003057!5.50e-18!15;UBERON:0000924!1.47e-17!173;UBERON:0006601!1.47e-17!173;UBERON:0002020!5.29e-16!34;UBERON:0003528!5.29e-16!34;UBERON:0001893!1.29e-15!34;UBERON:0001869!1.22e-14!32;UBERON:0002791!4.24e-14!33;UBERON:0002298!5.79e-13!8;UBERON:0003296!1.67e-12!4;UBERON:0010133!1.67e-12!4;UBERON:0000488!1.77e-12!4;UBERON:0000956!2.83e-12!25;UBERON:0000203!2.83e-12!25;UBERON:0002619!8.08e-12!22;UBERON:0004733!5.09e-11!12;UBERON:0002028!5.09e-11!12;UBERON:0007277!5.09e-11!12;UBERON:0000200!6.81e-11!6;UBERON:0001950!7.66e-11!20;UBERON:0006947!1.64e-10!3;UBERON:0004054!1.64e-10!3;UBERON:0001894!1.65e-10!7;UBERON:0006222!1.65e-10!7;UBERON:0002240!3.82e-10!3;UBERON:0004732!4.37e-10!13;UBERON:0001778!5.62e-10!3;UBERON:0001775!5.62e-10!3;UBERON:0000988!8.48e-10!3;UBERON:0000477!1.33e-09!286;UBERON:0001896!1.85e-09!3;UBERON:0005290!1.85e-09!3;UBERON:0010096!1.85e-09!3;UBERON:0002771!9.68e-09!3;UBERON:0000475!2.51e-08!365;UBERON:0002203!2.66e-08!6;UBERON:0001768!2.66e-08!6;UBERON:0000025!5.81e-08!194;UBERON:0005904!5.91e-08!4;UBERON:0004111!6.55e-08!241;UBERON:0000007!3.43e-07!2;UBERON:0002148!3.53e-07!2;UBERON:0009662!3.53e-07!2;UBERON:0000341!4.35e-07!2;UBERON:0001905!5.67e-07!2;UBERON:0002757!5.67e-07!2;UBERON:0010134!5.67e-07!2;UBERON:0002784!5.67e-07!2;UBERON:0005408!5.67e-07!2;UBERON:0001899!5.67e-07!2;UBERON:0000483!7.52e-07!309|ontology_enrichment_uberon_v019=UBERON:0006947;8.96e-37;3!UBERON:0004054;8.96e-37;3!UBERON:0002240;3.81e-35;3!UBERON:0005174;3.81e-35;3!UBERON:0001137;3.81e-35;3!UBERON:0005904;9.00e-28;4!UBERON:0002148;4.75e-24;2!UBERON:0006331;4.75e-24;2!UBERON:0009662;4.75e-24;2!UBERON:0000988;2.20e-16;3!UBERON:0001778;2.20e-16;3!UBERON:0001775;2.20e-16;3!UBERON:0000998;1.71e-13;1!UBERON:0001301;1.71e-13;1!UBERON:0006868;1.71e-13;1!UBERON:0001000;2.05e-13;1!UBERON:0005352;2.05e-13;1!UBERON:0000488;1.56e-12;4!UBERON:0000058;1.73e-11;10!UBERON:0003135;1.71e-10;11!UBERON:0002046;2.19e-10;5!UBERON:0002203;1.17e-08;6!UBERON:0001768;1.17e-08;6!UBERON:0002200;1.17e-08;6!UBERON:0002298;1.17e-08;6!UBERON:0000341;3.00e-07;2!UBERON:0000007;3.00e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.98e-37,3;UBERON:0004054,8.98e-37,3;UBERON:0002240,2.53e-35,3;UBERON:0005174,2.53e-35,3;UBERON:0001137,2.53e-35,3;UBERON:0005904,9.01e-28,4;UBERON:0002148,1.22e-23,2;UBERON:0006331,1.22e-23,2;UBERON:0009662,1.22e-23,2;UBERON:0003076,4.01e-19,15;UBERON:0003057,4.01e-19,15;UBERON:0001778,1.88e-16,3;UBERON:0001775,1.88e-16,3;UBERON:0000988,4.11e-16,3;UBERON:0001301,1.61e-13,1;UBERON:0000998,1.82e-13,1;UBERON:0006868,1.82e-13,1;UBERON:0001000,2.06e-13,1;UBERON:0005352,2.06e-13,1;UBERON:0000488,1.39e-12,4;UBERON:0003135,1.71e-10,11;UBERON:0002046,1.86e-10,5;UBERON:0004117,1.86e-10,5;UBERON:0007689,1.86e-10,5;UBERON:0007123,1.86e-10,5;UBERON:0003091,1.86e-10,5;UBERON:0000489,1.80e-09,31;UBERON:0002203,1.08e-08,6;UBERON:0001768,1.08e-08,6;UBERON:0002200,1.08e-08,6;UBERON:0002298,1.59e-08,6;UBERON:0003075,4.49e-08,82;UBERON:0007284,4.49e-08,82;UBERON:0002346,1.16e-07,86;UBERON:0010314,1.84e-07,132;UBERON:0000341,2.91e-07,2;UBERON:0007023,2.92e-07,114;UBERON:0000007,3.09e-07,2;UBERON:0001049,5.89e-07,56;UBERON:0005068,5.89e-07,56;UBERON:0006241,5.89e-07,56;UBERON:0007135,5.89e-07,56|phase1_expression=0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1023 | |||
|description=CAGE_peak_at_chr12:97856637..97856647,+ | |||
|id=chr12:97856637..97856647,+ | |||
|ontology_enrichment_celltype=CL:0000064!5.62e-10!3;CL:0005012!5.62e-10!3;CL:0000067!5.62e-10!3;CL:0002304!5.62e-10!3;CL:0002322!5.83e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.20e-16;3!CL:0000067;2.20e-16;3!CL:0005012;2.20e-16;3!CL:0002304;2.20e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.88e-16,3;CL:0000067,1.88e-16,3;CL:0005012,1.88e-16,3;CL:0002304,1.88e-16,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.81e-35;3!UBERON:0003057;3.81e-35;3!UBERON:0007297;3.44e-25;2!UBERON:0005754;1.71e-13;1!UBERON:0007123;2.19e-10;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;4.29e-07;2!DOID:4236;4.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,4.69e-07,2;DOID:4236,4.69e-07,2 | |||
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|short_description=p@chr12:97856637..97856647,+ | |||
}} |
Revision as of 01:10, 11 September 2013
Short description: | p@chr12:97856637..97856647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:97856637..97856647, + |
Coexpression cluster: | C1023_seminal_ductus_thyroid_pituitary_throat_small_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.88e-16 | 3 |
ciliated epithelial cell | 1.88e-16 | 3 |
multi-ciliated epithelial cell | 1.88e-16 | 3 |
non-pigmented ciliary epithelial cell | 1.88e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 4.69e-07 | 2 |
carcinosarcoma | 4.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.