FFCP PHASE1:Hg19::chr17:74639730..74639811,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55808|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23614|TSSclassifier=S|UniProt=G3XAD9|association_with_transcript=0bp_to_ENST00000359088_5end|description=CAGE_peak_1_at_ST6GALNAC1_5end|id=chr17:74639730..74639811,-|ontology_enrichment_celltype=CL:0002076!4.51e-08!43;CL:0002368!8.28e-08!13|ontology_enrichment_celltype_v019=CL:0002368;2.42e-09;13!CL:0002076;5.21e-07;42|ontology_enrichment_celltype_v019_2=CL:0002368,2.14e-09,13;CL:0002076,4.51e-09,42;CL:0000223,4.47e-07,58|ontology_enrichment_development_v019=UBERON:0006601;9.93e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;5.21e-07;8|ontology_enrichment_disease_v019_2=DOID:1036,5.21e-07,8|ontology_enrichment_uberon=UBERON:0007023!4.77e-46!115;UBERON:0001049!2.55e-15!57;UBERON:0005068!2.55e-15!57;UBERON:0006241!2.55e-15!57;UBERON:0007135!2.55e-15!57;UBERON:0003080!1.25e-12!42;UBERON:0002780!3.31e-12!41;UBERON:0001890!3.31e-12!41;UBERON:0006240!3.31e-12!41;UBERON:0002616!1.04e-11!59;UBERON:0000955!6.89e-11!69;UBERON:0006238!6.89e-11!69;UBERON:0001893!1.49e-10!34;UBERON:0002020!3.18e-10!34;UBERON:0003528!3.18e-10!34;UBERON:0002791!4.74e-10!33;UBERON:0001017!5.33e-10!82;UBERON:0001869!8.40e-10!32;UBERON:0003075!1.31e-09!86;UBERON:0007284!1.31e-09!86;UBERON:0005743!3.04e-09!86;UBERON:0002619!4.13e-09!22;UBERON:0004119!7.41e-09!169;UBERON:0000925!7.41e-09!169;UBERON:0006595!7.41e-09!169;UBERON:0004111!9.14e-09!241;UBERON:0001950!1.36e-08!20;UBERON:0002346!2.02e-08!90;UBERON:0000025!2.62e-08!194;UBERON:0000153!5.06e-08!129;UBERON:0007811!5.06e-08!129;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0000073!2.02e-07!94;UBERON:0001016!2.02e-07!94;UBERON:0000956!3.49e-07!25;UBERON:0000203!3.49e-07!25;UBERON:0000033!4.39e-07!123;UBERON:0001007!4.82e-07!155;UBERON:0001555!4.82e-07!155;UBERON:0007026!4.82e-07!155;UBERON:0000064!8.13e-07!219|ontology_enrichment_uberon_v019=UBERON:0007023;1.08e-12;114!UBERON:0002619;3.79e-10;22!UBERON:0002780;7.64e-10;41!UBERON:0001890;7.64e-10;41!UBERON:0001869;8.93e-10;32!UBERON:0001893;1.06e-09;34!UBERON:0003528;1.49e-09;34!UBERON:0002020;1.49e-09;34!UBERON:0001950;1.67e-09;20!UBERON:0002791;2.63e-09;32!UBERON:0004921;3.26e-09;33!UBERON:0000073;8.67e-09;53!UBERON:0002616;8.67e-09;53!UBERON:0005409;1.60e-08;22!UBERON:0000956;2.89e-08;25!UBERON:0000203;2.89e-08;25!UBERON:0000160;1.72e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.36e-48,114;UBERON:0001049,8.74e-17,56;UBERON:0005068,8.74e-17,56;UBERON:0006241,8.74e-17,56;UBERON:0007135,8.74e-17,56;UBERON:0011216,4.46e-16,223;UBERON:0000073,1.47e-15,53;UBERON:0002616,1.47e-15,53;UBERON:0002780,4.37e-13,41;UBERON:0001890,4.37e-13,41;UBERON:0003080,4.37e-13,41;UBERON:0006240,4.37e-13,41;UBERON:0001893,1.37e-11,34;UBERON:0000955,1.99e-11,68;UBERON:0006238,1.99e-11,68;UBERON:0003075,2.21e-11,82;UBERON:0007284,2.21e-11,82;UBERON:0003528,3.33e-11,34;UBERON:0002020,3.33e-11,34;UBERON:0001017,4.55e-11,81;UBERON:0001869,1.10e-10,32;UBERON:0002791,2.24e-10,32;UBERON:0002346,3.41e-10,86;UBERON:0002619,3.65e-10,22;UBERON:0001950,1.59e-09,20;UBERON:0005409,2.39e-09,25;UBERON:0001016,2.66e-09,89;UBERON:0004119,2.91e-09,160;UBERON:0000925,2.91e-09,160;UBERON:0006595,2.91e-09,160;UBERON:0004921,1.96e-08,118;UBERON:0000956,2.80e-08,25;UBERON:0000203,2.80e-08,25;UBERON:0010371,6.97e-08,104;UBERON:0000160,1.81e-07,17;UBERON:0003056,1.86e-07,61;UBERON:0001007,2.32e-07,145;UBERON:0001555,2.32e-07,145;UBERON:0007026,2.32e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,3.48900583986214,5.02415155899396,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,27.5826367343678,25.301297177373,10.3531122846701,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0,3.63239701580021,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,5.79444986505169,3.73748563216283,5.50215067848831,5.96244347098577,0,0.651844533267181,0,0,7.68732152507698,1.47302953737419,0.664601683750863,0.270803863765016,2.81800903396485,2.21100890851793,1.47994114143309,1.38175008892924,4.05724320029073,2.52087157375503,3.21048993707656,1.04535523804977,4.98561107869291,6.51474839123266,12.026960591892,5.81945291644857,0.637130828648193,0,1.90090408889675,2.10805166708882,2.43174561193395,2.49861453104692,0.473554504088034,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,8.38266083185361,1.82147644146271,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0,1.69592382577203,9.64848703282784,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,1.74437620857014,0,0.25326102332916,0,0,0,0.560677600142307,1.06748995729705,0.49333509683432,0,1.0776853765575,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23614 | |||
|TSSclassifier=S | |||
|UniProt=G3XAD9 | |||
|association_with_transcript=0bp_to_ENST00000359088_5end | |||
|description=CAGE_peak_1_at_ST6GALNAC1_5end | |||
|id=chr17:74639730..74639811,- | |||
|ontology_enrichment_celltype=CL:0002076!4.51e-08!43;CL:0002368!8.28e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.42e-09;13!CL:0002076;5.21e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.14e-09,13;CL:0002076,4.51e-09,42;CL:0000223,4.47e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.93e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;5.21e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.21e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.77e-46!115;UBERON:0001049!2.55e-15!57;UBERON:0005068!2.55e-15!57;UBERON:0006241!2.55e-15!57;UBERON:0007135!2.55e-15!57;UBERON:0003080!1.25e-12!42;UBERON:0002780!3.31e-12!41;UBERON:0001890!3.31e-12!41;UBERON:0006240!3.31e-12!41;UBERON:0002616!1.04e-11!59;UBERON:0000955!6.89e-11!69;UBERON:0006238!6.89e-11!69;UBERON:0001893!1.49e-10!34;UBERON:0002020!3.18e-10!34;UBERON:0003528!3.18e-10!34;UBERON:0002791!4.74e-10!33;UBERON:0001017!5.33e-10!82;UBERON:0001869!8.40e-10!32;UBERON:0003075!1.31e-09!86;UBERON:0007284!1.31e-09!86;UBERON:0005743!3.04e-09!86;UBERON:0002619!4.13e-09!22;UBERON:0004119!7.41e-09!169;UBERON:0000925!7.41e-09!169;UBERON:0006595!7.41e-09!169;UBERON:0004111!9.14e-09!241;UBERON:0001950!1.36e-08!20;UBERON:0002346!2.02e-08!90;UBERON:0000025!2.62e-08!194;UBERON:0000153!5.06e-08!129;UBERON:0007811!5.06e-08!129;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0000073!2.02e-07!94;UBERON:0001016!2.02e-07!94;UBERON:0000956!3.49e-07!25;UBERON:0000203!3.49e-07!25;UBERON:0000033!4.39e-07!123;UBERON:0001007!4.82e-07!155;UBERON:0001555!4.82e-07!155;UBERON:0007026!4.82e-07!155;UBERON:0000064!8.13e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.08e-12;114!UBERON:0002619;3.79e-10;22!UBERON:0002780;7.64e-10;41!UBERON:0001890;7.64e-10;41!UBERON:0001869;8.93e-10;32!UBERON:0001893;1.06e-09;34!UBERON:0003528;1.49e-09;34!UBERON:0002020;1.49e-09;34!UBERON:0001950;1.67e-09;20!UBERON:0002791;2.63e-09;32!UBERON:0004921;3.26e-09;33!UBERON:0000073;8.67e-09;53!UBERON:0002616;8.67e-09;53!UBERON:0005409;1.60e-08;22!UBERON:0000956;2.89e-08;25!UBERON:0000203;2.89e-08;25!UBERON:0000160;1.72e-07;17 | |||
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| |||
|short_description=p1@ST6GALNAC1 | |||
}} |
Revision as of 15:50, 11 September 2013
Short description: | p1@ST6GALNAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ST6GALNAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359088_5end |
EntrezGene: | ST6GALNAC1 |
HGNC: | 23614 |
UniProt: | G3XAD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.14e-09 | 13 |
endo-epithelial cell | 4.51e-09 | 42 |
endodermal cell | 4.47e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.21e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.