FFCP PHASE1:Hg19::chr2:235244770..235244800,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C512|description=CAGE_peak_at_chr2:235244770..235244800,+|id=chr2:235244770..235244800,+|ontology_enrichment_celltype=CL:0002057!9.23e-66!42;CL:0000860!1.48e-60!45;CL:0000738!6.08e-53!140;CL:0000557!4.87e-50!71;CL:0000766!1.49e-48!76;CL:0002009!4.10e-47!65;CL:0000839!8.60e-46!70;CL:0002194!1.03e-43!63;CL:0000576!1.03e-43!63;CL:0000040!1.03e-43!63;CL:0000559!1.03e-43!63;CL:0000037!1.43e-42!172;CL:0000566!1.43e-42!172;CL:0002031!4.84e-42!124;CL:0002087!3.00e-40!119;CL:0000988!3.41e-39!182;CL:0000763!1.34e-36!112;CL:0000049!1.34e-36!112;CL:0002032!7.26e-36!165;CL:0000837!7.26e-36!165;CL:0002393!4.64e-20!9;CL:0002397!4.64e-20!9;CL:0000134!4.84e-14!358;CL:0002320!2.04e-13!365;CL:0000219!5.48e-13!390;CL:0000624!2.15e-12!6;CL:0000034!2.13e-09!444;CL:0000048!3.86e-09!430;CL:0000723!9.07e-09!436;CL:0000623!5.30e-08!3;CL:0000825!5.30e-08!3;CL:0000451!6.00e-08!10;CL:0000767!8.10e-08!3;CL:0000791!9.22e-08!18;CL:0000789!9.22e-08!18;CL:0002420!9.22e-08!18;CL:0002419!9.22e-08!18;CL:0000790!9.22e-08!18;CL:0000875!2.02e-07!3;CL:0002396!2.02e-07!3;CL:0000842!3.03e-07!3;CL:0000453!7.96e-07!5;CL:0000898!8.22e-07!3|ontology_enrichment_celltype_v019=CL:0000766;2.10e-29;69!CL:0000576;4.47e-29;48!CL:0000860;5.97e-29;33!CL:0002057;5.97e-29;33!CL:0002393;4.22e-25;6!CL:0002397;4.22e-25;6!CL:0000473;1.89e-23;39!CL:0000234;1.89e-23;39!CL:0000623;1.61e-13;3!CL:0000767;4.87e-13;3!CL:0002087;8.64e-13;104!CL:0000875;3.05e-12;3!CL:0002396;3.05e-12;3!CL:0000738;1.24e-10;136!CL:0000624;1.78e-10;6!CL:0000763;2.81e-10;100!CL:0001014;5.92e-09;2!CL:0001016;5.92e-09;2!CL:0000097;1.74e-08;5|ontology_enrichment_celltype_v019_2=CL:0000860,4.47e-58,42;CL:0002057,4.47e-58,42;CL:0000473,3.29e-54,48;CL:0000234,3.29e-54,48;CL:0000557,3.65e-53,67;CL:0000766,1.07e-52,72;CL:0000738,2.32e-50,136;CL:0002009,3.54e-47,61;CL:0000839,4.48e-47,66;CL:0002031,2.01e-44,120;CL:0002194,5.12e-42,59;CL:0000576,5.12e-42,59;CL:0000040,5.12e-42,59;CL:0000559,5.12e-42,59;CL:0000037,5.01e-39,168;CL:0002087,1.01e-38,115;CL:0000763,2.61e-37,108;CL:0000049,2.61e-37,108;CL:0002032,6.45e-37,161;CL:0000837,6.45e-37,161;CL:0000988,1.43e-36,177;CL:0002393,8.23e-36,9;CL:0002397,8.23e-36,9;CL:0000134,1.56e-13,354;CL:0000623,1.83e-13,3;CL:0000825,1.83e-13,3;CL:0000767,3.98e-13,3;CL:0002320,4.40e-13,361;CL:0000875,2.15e-12,3;CL:0002396,2.15e-12,3;CL:0000219,1.68e-11,386;CL:0000624,1.45e-10,6;CL:0000034,1.84e-10,441;CL:0000048,1.45e-09,427;CL:0000723,2.68e-09,433;CL:0001014,8.16e-09,2;CL:0001016,8.16e-09,2;CL:0000097,1.66e-08,5;CL:0002028,1.66e-08,5|ontology_enrichment_development_v019=CL:0002057;9.01e-44;42!CL:0000049;7.38e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.72e-45!80;UBERON:0002390!9.09e-42!102;UBERON:0003061!9.09e-42!102;UBERON:0001474!5.78e-41!86;UBERON:0002193!1.04e-36!112;UBERON:0004765!7.12e-33!101;UBERON:0001434!7.12e-33!101;UBERON:0002405!7.74e-29!115;UBERON:0002204!1.99e-16!167;UBERON:0003081!5.03e-16!216;UBERON:0002384!3.53e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.85e-46,76;UBERON:0001474,3.77e-42,82;UBERON:0002390,9.38e-42,98;UBERON:0003061,9.38e-42,98;UBERON:0002405,5.97e-39,93;UBERON:0004765,9.24e-38,90;UBERON:0002193,3.66e-37,108;UBERON:0001434,2.97e-33,100;UBERON:0002204,6.26e-17,167;UBERON:0003081,5.04e-16,203;UBERON:0002384,1.81e-12,371;UBERON:0000926,1.55e-07,315;UBERON:0004120,1.55e-07,315;UBERON:0006603,1.55e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,5.57338043937874,0,0,0,0,0,0.587200878669695,7.20194031091441,2.80762226458198,5.859293509328,0,0,0,0.872389432677388,1.13362783106643,0.727752183563449,1.62700325833979,1.23350366406548,4.02618282163635,0.575384784644301,0.512321413058201,1.6553756092201,2.06847408441971,1.93645405075148,5.41705946377367,1.12945403725563,2.45615535052061,3.59557575112135,1.22433556948361,0.641858054152187,3.19668562899521,0.989553900560148,0.797854630486527,0.852449501065388,0,0.56738522469114,0,0.75374599577023,2.08593167368081,1.52032191293582,0,0,0.632924774881769,5.0701268714866,3.18906449947565,3.56419697364239,1.46027220490444,0.600707571366025,1.28580469357664,1.99508920618874,1.19350006319454,2.55729815270488,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0,1.7703879310245,1.57204305099666,1.02800749499755,0,0.651844533267181,0.473447805734733,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0,0,0,3.55887751588945,1.33770414044857,0,0.113309342697566,2.68254345521345,1.03088233644789,1.01207876807801,0,0,0,0,0,0,0,0,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C512 | |||
|description=CAGE_peak_at_chr2:235244770..235244800,+ | |||
|id=chr2:235244770..235244800,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.23e-66!42;CL:0000860!1.48e-60!45;CL:0000738!6.08e-53!140;CL:0000557!4.87e-50!71;CL:0000766!1.49e-48!76;CL:0002009!4.10e-47!65;CL:0000839!8.60e-46!70;CL:0002194!1.03e-43!63;CL:0000576!1.03e-43!63;CL:0000040!1.03e-43!63;CL:0000559!1.03e-43!63;CL:0000037!1.43e-42!172;CL:0000566!1.43e-42!172;CL:0002031!4.84e-42!124;CL:0002087!3.00e-40!119;CL:0000988!3.41e-39!182;CL:0000763!1.34e-36!112;CL:0000049!1.34e-36!112;CL:0002032!7.26e-36!165;CL:0000837!7.26e-36!165;CL:0002393!4.64e-20!9;CL:0002397!4.64e-20!9;CL:0000134!4.84e-14!358;CL:0002320!2.04e-13!365;CL:0000219!5.48e-13!390;CL:0000624!2.15e-12!6;CL:0000034!2.13e-09!444;CL:0000048!3.86e-09!430;CL:0000723!9.07e-09!436;CL:0000623!5.30e-08!3;CL:0000825!5.30e-08!3;CL:0000451!6.00e-08!10;CL:0000767!8.10e-08!3;CL:0000791!9.22e-08!18;CL:0000789!9.22e-08!18;CL:0002420!9.22e-08!18;CL:0002419!9.22e-08!18;CL:0000790!9.22e-08!18;CL:0000875!2.02e-07!3;CL:0002396!2.02e-07!3;CL:0000842!3.03e-07!3;CL:0000453!7.96e-07!5;CL:0000898!8.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000766;2.10e-29;69!CL:0000576;4.47e-29;48!CL:0000860;5.97e-29;33!CL:0002057;5.97e-29;33!CL:0002393;4.22e-25;6!CL:0002397;4.22e-25;6!CL:0000473;1.89e-23;39!CL:0000234;1.89e-23;39!CL:0000623;1.61e-13;3!CL:0000767;4.87e-13;3!CL:0002087;8.64e-13;104!CL:0000875;3.05e-12;3!CL:0002396;3.05e-12;3!CL:0000738;1.24e-10;136!CL:0000624;1.78e-10;6!CL:0000763;2.81e-10;100!CL:0001014;5.92e-09;2!CL:0001016;5.92e-09;2!CL:0000097;1.74e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.47e-58,42;CL:0002057,4.47e-58,42;CL:0000473,3.29e-54,48;CL:0000234,3.29e-54,48;CL:0000557,3.65e-53,67;CL:0000766,1.07e-52,72;CL:0000738,2.32e-50,136;CL:0002009,3.54e-47,61;CL:0000839,4.48e-47,66;CL:0002031,2.01e-44,120;CL:0002194,5.12e-42,59;CL:0000576,5.12e-42,59;CL:0000040,5.12e-42,59;CL:0000559,5.12e-42,59;CL:0000037,5.01e-39,168;CL:0002087,1.01e-38,115;CL:0000763,2.61e-37,108;CL:0000049,2.61e-37,108;CL:0002032,6.45e-37,161;CL:0000837,6.45e-37,161;CL:0000988,1.43e-36,177;CL:0002393,8.23e-36,9;CL:0002397,8.23e-36,9;CL:0000134,1.56e-13,354;CL:0000623,1.83e-13,3;CL:0000825,1.83e-13,3;CL:0000767,3.98e-13,3;CL:0002320,4.40e-13,361;CL:0000875,2.15e-12,3;CL:0002396,2.15e-12,3;CL:0000219,1.68e-11,386;CL:0000624,1.45e-10,6;CL:0000034,1.84e-10,441;CL:0000048,1.45e-09,427;CL:0000723,2.68e-09,433;CL:0001014,8.16e-09,2;CL:0001016,8.16e-09,2;CL:0000097,1.66e-08,5;CL:0002028,1.66e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.01e-44;42!CL:0000049;7.38e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.72e-45!80;UBERON:0002390!9.09e-42!102;UBERON:0003061!9.09e-42!102;UBERON:0001474!5.78e-41!86;UBERON:0002193!1.04e-36!112;UBERON:0004765!7.12e-33!101;UBERON:0001434!7.12e-33!101;UBERON:0002405!7.74e-29!115;UBERON:0002204!1.99e-16!167;UBERON:0003081!5.03e-16!216;UBERON:0002384!3.53e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.85e-46,76;UBERON:0001474,3.77e-42,82;UBERON:0002390,9.38e-42,98;UBERON:0003061,9.38e-42,98;UBERON:0002405,5.97e-39,93;UBERON:0004765,9.24e-38,90;UBERON:0002193,3.66e-37,108;UBERON:0001434,2.97e-33,100;UBERON:0002204,6.26e-17,167;UBERON:0003081,5.04e-16,203;UBERON:0002384,1.81e-12,371;UBERON:0000926,1.55e-07,315;UBERON:0004120,1.55e-07,315;UBERON:0006603,1.55e-07,315 | |||
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|short_description=p@chr2:235244770..235244800,+ | |||
}} |
Revision as of 17:31, 12 September 2013
Short description: | p@chr2:235244770..235244800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:235244770..235244800, + |
Coexpression cluster: | C512_Mast_immature_Basophils_CD14_CD34_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.85e-46 | 76 |
bone element | 3.77e-42 | 82 |
hematopoietic system | 9.38e-42 | 98 |
blood island | 9.38e-42 | 98 |
immune system | 5.97e-39 | 93 |
skeletal element | 9.24e-38 | 90 |
hemolymphoid system | 3.66e-37 | 108 |
skeletal system | 2.97e-33 | 100 |
musculoskeletal system | 6.26e-17 | 167 |
lateral plate mesoderm | 5.04e-16 | 203 |
connective tissue | 1.81e-12 | 371 |
mesoderm | 1.55e-07 | 315 |
mesoderm-derived structure | 1.55e-07 | 315 |
presumptive mesoderm | 1.55e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.