FFCP PHASE1:Mm9::chr11:101845657..101845668,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:101845657..101845668,+|id=chr11:101845657..101845668,+|ontology_enrichment_celltype=CL:0000144!2.36e-10!121;CL:0000012!2.36e-10!121;CL:0000063!3.95e-10!66;CL:0002563!8.05e-10!9;CL:0002251!8.05e-10!9;CL:0002371!2.03e-08!118;CL:0000066!2.67e-08!25;CL:0000075!5.16e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,2.83e-14,9;CL:0002251,2.83e-14,9;CL:0000066,1.32e-09,25;CL:0000223,4.61e-09,20;CL:0002076,1.59e-08,15;CL:0000239,1.94e-08,6;CL:0000677,1.94e-08,6;CL:0000584,1.94e-08,6;CL:0002250,1.19e-07,3;CL:0000075,2.67e-07,7;CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.42e-08,3;DOID:4045,2.42e-08,3|ontology_enrichment_uberon=UBERON:0003350!8.05e-10!9;UBERON:0004808!8.05e-10!9;UBERON:0001277!8.05e-10!9;UBERON:0000485!2.53e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.83e-14,9;UBERON:0004808,2.83e-14,9;UBERON:0001277,2.83e-14,9;UBERON:0000485,1.15e-11,11;UBERON:0001242,7.44e-10,13;UBERON:0001262,7.44e-10,13;UBERON:0004786,7.44e-10,13;UBERON:0000344,1.59e-08,15;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1|phase1_expression=0,1.39590163055744,1.36499771816861,0,0.500895729946347,1.34303417529512,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0.0992909512008853,0,0,0,0.57423196411502,1.29228598847722,0.646413698057667,0,0,0,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,1.22501613757421,2.51118978442145,3.906676722619,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,12.1743085254705,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.479260498023681,2.39961092397363,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,1.13665399758237,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,2.37917468950219,0.690999869022119,0,0,0,0,0,0,0.134864346384821,0,0,0,0,2.81846469342095,0,0,0,0,0,0,0,0,0,1.72818003754719,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:101845657..101845668,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:101845657..101845668,+ | |||
|id=chr11:101845657..101845668,+ | |||
|ontology_enrichment_celltype=CL:0000144!2.36e-10!121;CL:0000012!2.36e-10!121;CL:0000063!3.95e-10!66;CL:0002563!8.05e-10!9;CL:0002251!8.05e-10!9;CL:0002371!2.03e-08!118;CL:0000066!2.67e-08!25;CL:0000075!5.16e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.83e-14,9;CL:0002251,2.83e-14,9;CL:0000066,1.32e-09,25;CL:0000223,4.61e-09,20;CL:0002076,1.59e-08,15;CL:0000239,1.94e-08,6;CL:0000677,1.94e-08,6;CL:0000584,1.94e-08,6;CL:0002250,1.19e-07,3;CL:0000075,2.67e-07,7;CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.42e-08,3;DOID:4045,2.42e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!8.05e-10!9;UBERON:0004808!8.05e-10!9;UBERON:0001277!8.05e-10!9;UBERON:0000485!2.53e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.83e-14,9;UBERON:0004808,2.83e-14,9;UBERON:0001277,2.83e-14,9;UBERON:0000485,1.15e-11,11;UBERON:0001242,7.44e-10,13;UBERON:0001262,7.44e-10,13;UBERON:0004786,7.44e-10,13;UBERON:0000344,1.59e-08,15;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,0,0.500895729946347,1.34303417529512,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0.0992909512008853,0,0,0,0.57423196411502,1.29228598847722,0.646413698057667,0,0,0,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,1.22501613757421,2.51118978442145,3.906676722619,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,12.1743085254705,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.479260498023681,2.39961092397363,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,1.13665399758237,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,2.37917468950219,0.690999869022119,0,0,0,0,0,0,0.134864346384821,0,0,0,0,2.81846469342095,0,0,0,0,0,0,0,0,0,1.72818003754719,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:101845657..101845668,+ | |||
}} |
Revision as of 18:17, 12 September 2013
Short description: | p@chr11:101845657..101845668, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:101845657..101845668, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.83e-14 | 9 |
epithelial cell of alimentary canal | 2.83e-14 | 9 |
epithelial cell | 1.32e-09 | 25 |
endodermal cell | 4.61e-09 | 20 |
endo-epithelial cell | 1.59e-08 | 15 |
brush border epithelial cell | 1.94e-08 | 6 |
gut absorptive cell | 1.94e-08 | 6 |
enterocyte | 1.94e-08 | 6 |
intestinal crypt stem cell | 1.19e-07 | 3 |
columnar/cuboidal epithelial cell | 2.67e-07 | 7 |
lining cell | 5.73e-07 | 1 |
meso-epithelial cell | 5.73e-07 | 1 |
endothelial cell | 5.73e-07 | 1 |
endothelial cell of sinusoid | 5.73e-07 | 1 |
endothelial cell of hepatic sinusoid | 5.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.83e-14 | 9 |
gastrointestinal system epithelium | 2.83e-14 | 9 |
intestinal epithelium | 2.83e-14 | 9 |
simple columnar epithelium | 1.15e-11 | 11 |
intestinal mucosa | 7.44e-10 | 13 |
wall of intestine | 7.44e-10 | 13 |
gastrointestinal system mucosa | 7.44e-10 | 13 |
mucosa | 1.59e-08 | 15 |
bile duct | 5.73e-07 | 1 |
hepatic sinusoid | 5.73e-07 | 1 |
parenchyma | 5.73e-07 | 1 |
abdomen blood vessel | 5.73e-07 | 1 |
sinusoid | 5.73e-07 | 1 |
digestive system duct | 5.73e-07 | 1 |
abdominal segment blood vessel | 5.73e-07 | 1 |
trunk blood vessel | 5.73e-07 | 1 |
liver parenchyma | 5.73e-07 | 1 |
liver lobule | 5.73e-07 | 1 |
biliary system | 5.73e-07 | 1 |
biliary tree | 5.73e-07 | 1 |
biliary bud | 5.73e-07 | 1 |
hepatic duct | 5.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.42e-08 | 3 |
muscle cancer | 2.42e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.