FFCP PHASE1:Hg19::chr3:196366555..196366572,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=375387|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24613|TSSclassifier=S|UniProt=Q86YC3|association_with_transcript=0bp_to_ENST00000328557_5end|coexpression_cluster_id=C2737|description=CAGE_peak_2_at_LRRC33_5end|id=chr3:196366555..196366572,+|ontology_enrichment_celltype=CL:0000037!9.00e-72!172;CL:0000566!9.00e-72!172;CL:0002032!3.00e-67!165;CL:0000837!3.00e-67!165;CL:0000988!3.75e-67!182;CL:0000738!9.13e-50!140;CL:0000763!3.47e-49!112;CL:0000049!3.47e-49!112;CL:0002031!2.40e-44!124;CL:0002087!1.30e-42!119;CL:0000557!3.60e-29!71;CL:0000839!2.81e-28!70;CL:0000766!2.29e-27!76;CL:0002009!3.03e-26!65;CL:0002194!1.71e-25!63;CL:0000576!1.71e-25!63;CL:0000040!1.71e-25!63;CL:0000559!1.71e-25!63;CL:0002057!3.43e-21!42;CL:0000860!2.65e-18!45;CL:0000542!3.73e-15!53;CL:0000051!3.73e-15!53;CL:0000838!1.41e-14!52;CL:0000134!4.24e-11!358;CL:0002320!8.28e-10!365;CL:0000219!3.28e-09!390;CL:0000945!1.51e-07!24;CL:0000826!1.51e-07!24;CL:0000084!1.57e-07!25;CL:0000827!1.57e-07!25;CL:0000451!2.26e-07!10|ontology_enrichment_celltype_v019=CL:0000576;3.40e-21;48!CL:0000763;5.40e-21;100!CL:0000473;1.09e-20;39!CL:0000234;1.09e-20;39!CL:0000766;2.28e-19;69!CL:0000860;7.81e-19;33!CL:0002057;7.81e-19;33!CL:0000988;8.23e-15;177!CL:0002087;1.71e-14;104!CL:0000738;1.98e-14;136!CL:0000451;1.81e-10;10!CL:0000990;3.51e-09;8!CL:0000235;6.27e-08;6!CL:0000542;1.01e-07;53!CL:0000945;1.51e-07;24!CL:0002393;5.55e-07;6!CL:0002397;5.55e-07;6|ontology_enrichment_celltype_v019_2=CL:0000037,7.96e-99,168;CL:0000988,3.34e-94,177;CL:0002032,4.51e-92,161;CL:0000837,4.51e-92,161;CL:0000763,8.39e-77,108;CL:0000049,8.39e-77,108;CL:0000738,2.84e-67,136;CL:0002031,6.96e-58,120;CL:0002087,1.86e-56,115;CL:0000557,6.38e-46,67;CL:0000839,1.62e-44,66;CL:0000766,3.63e-44,72;CL:0002009,9.48e-43,61;CL:0002194,1.32e-41,59;CL:0000576,1.32e-41,59;CL:0000040,1.32e-41,59;CL:0000559,1.32e-41,59;CL:0000473,1.44e-34,48;CL:0000234,1.44e-34,48;CL:0000860,3.06e-28,42;CL:0002057,3.06e-28,42;CL:0000134,3.92e-23,354;CL:0002320,7.37e-22,361;CL:0000219,1.71e-19,386;CL:0000034,4.86e-15,441;CL:0000542,3.65e-14,53;CL:0000051,3.65e-14,53;CL:0000838,2.06e-13,52;CL:0000048,4.22e-13,427;CL:0000723,2.19e-12,433;CL:0000451,1.90e-10,10;CL:0002393,2.20e-09,9;CL:0002397,2.20e-09,9;CL:0000990,3.70e-09,8;CL:0000235,5.84e-08,6;CL:0000945,1.78e-07,24;CL:0000826,1.78e-07,24;CL:0000084,7.31e-07,25;CL:0000827,7.31e-07,25|ontology_enrichment_development_v019=CL:0000049;4.73e-21;108!CL:0002057;1.32e-20;42!CL:0000051;1.01e-07;53|ontology_enrichment_disease=DOID:2531!2.24e-23!51;DOID:0060083!2.24e-23!51;DOID:1240!3.40e-23!39;DOID:8692!1.24e-19!31|ontology_enrichment_disease_v019=DOID:8692;7.95e-27;31!DOID:1240;2.95e-25;39!DOID:2531;3.25e-20;51!DOID:0060083;3.25e-20;51|ontology_enrichment_disease_v019_2=DOID:1240,9.75e-34,39;DOID:2531,4.07e-33,51;DOID:0060083,4.07e-33,51;DOID:8692,9.75e-28,31|ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!4.71e-31!112;UBERON:0002371!2.76e-25!80;UBERON:0001474!3.70e-21!86;UBERON:0002405!1.77e-17!115;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0003081!6.03e-10!216;UBERON:0002384!4.13e-09!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-09;15!UBERON:0000179;1.63e-09;15!UBERON:0000463;1.63e-09;15!UBERON:0002390;1.77e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-55,98;UBERON:0003061,1.85e-55,98;UBERON:0002193,1.09e-48,108;UBERON:0002371,4.51e-41,76;UBERON:0002405,1.48e-39,93;UBERON:0001474,2.34e-36,82;UBERON:0004765,4.37e-31,90;UBERON:0001434,9.59e-26,100;UBERON:0002384,1.95e-21,371;UBERON:0003081,1.78e-15,203;UBERON:0000178,1.53e-09,15;UBERON:0000179,1.53e-09,15;UBERON:0000463,1.53e-09,15;UBERON:0002204,1.26e-08,167|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4686365874693,12.9718931330914,11.2556417278561,13.3743854128627,4.22212337906934,6.34746105595912,0,0,0,0,0.710846162437108,8.80801318004542,4.9859586767869,7.42014455639524,7.81239134577067,4.47830948479849,5.83008598834163,4.89393578504954,3.92575244704825,4.1566353805769,5.82201746850759,6.27558399645349,7.40102198439286,8.05236564327269,6.90461741573161,8.70946402198942,5.67557351732605,7.23965929546899,12.2642089880927,5.41705946377367,2.25890807451126,3.27487380069415,3.59557575112135,2.44867113896722,5.1348644332175,3.83602275479425,1.9791078011203,4.9865914405408,3.40979800426155,0.580418477257168,0.56738522469114,0.622822248995575,9.04495194924276,22.4237654920687,9.99068685643537,5.44859552370032,4.05105399586321,3.16462387440884,24.7168684984972,10.4176106982871,16.3533743496533,17.6355950899997,9.01061357049038,6.91120022797445,12.8255734683562,4.17725022118089,6.57590953552682,0,1.63841583378639,0.889509253863555,2.13365111283254,2.40237592221607,0.574752439954483,3.30522436392431,0.954053754535364,9.10740750575117,15.8554041130153,22.9363936875137,1.32171328579026,3.36305137788922,13.695972408304,1.57367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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=375387 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24613 | |||
|TSSclassifier=S | |||
|UniProt=Q86YC3 | |||
|association_with_transcript=0bp_to_ENST00000328557_5end | |||
|coexpression_cluster_id=C2737 | |||
|description=CAGE_peak_2_at_LRRC33_5end | |||
|id=chr3:196366555..196366572,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.00e-72!172;CL:0000566!9.00e-72!172;CL:0002032!3.00e-67!165;CL:0000837!3.00e-67!165;CL:0000988!3.75e-67!182;CL:0000738!9.13e-50!140;CL:0000763!3.47e-49!112;CL:0000049!3.47e-49!112;CL:0002031!2.40e-44!124;CL:0002087!1.30e-42!119;CL:0000557!3.60e-29!71;CL:0000839!2.81e-28!70;CL:0000766!2.29e-27!76;CL:0002009!3.03e-26!65;CL:0002194!1.71e-25!63;CL:0000576!1.71e-25!63;CL:0000040!1.71e-25!63;CL:0000559!1.71e-25!63;CL:0002057!3.43e-21!42;CL:0000860!2.65e-18!45;CL:0000542!3.73e-15!53;CL:0000051!3.73e-15!53;CL:0000838!1.41e-14!52;CL:0000134!4.24e-11!358;CL:0002320!8.28e-10!365;CL:0000219!3.28e-09!390;CL:0000945!1.51e-07!24;CL:0000826!1.51e-07!24;CL:0000084!1.57e-07!25;CL:0000827!1.57e-07!25;CL:0000451!2.26e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.40e-21;48!CL:0000763;5.40e-21;100!CL:0000473;1.09e-20;39!CL:0000234;1.09e-20;39!CL:0000766;2.28e-19;69!CL:0000860;7.81e-19;33!CL:0002057;7.81e-19;33!CL:0000988;8.23e-15;177!CL:0002087;1.71e-14;104!CL:0000738;1.98e-14;136!CL:0000451;1.81e-10;10!CL:0000990;3.51e-09;8!CL:0000235;6.27e-08;6!CL:0000542;1.01e-07;53!CL:0000945;1.51e-07;24!CL:0002393;5.55e-07;6!CL:0002397;5.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.96e-99,168;CL:0000988,3.34e-94,177;CL:0002032,4.51e-92,161;CL:0000837,4.51e-92,161;CL:0000763,8.39e-77,108;CL:0000049,8.39e-77,108;CL:0000738,2.84e-67,136;CL:0002031,6.96e-58,120;CL:0002087,1.86e-56,115;CL:0000557,6.38e-46,67;CL:0000839,1.62e-44,66;CL:0000766,3.63e-44,72;CL:0002009,9.48e-43,61;CL:0002194,1.32e-41,59;CL:0000576,1.32e-41,59;CL:0000040,1.32e-41,59;CL:0000559,1.32e-41,59;CL:0000473,1.44e-34,48;CL:0000234,1.44e-34,48;CL:0000860,3.06e-28,42;CL:0002057,3.06e-28,42;CL:0000134,3.92e-23,354;CL:0002320,7.37e-22,361;CL:0000219,1.71e-19,386;CL:0000034,4.86e-15,441;CL:0000542,3.65e-14,53;CL:0000051,3.65e-14,53;CL:0000838,2.06e-13,52;CL:0000048,4.22e-13,427;CL:0000723,2.19e-12,433;CL:0000451,1.90e-10,10;CL:0002393,2.20e-09,9;CL:0002397,2.20e-09,9;CL:0000990,3.70e-09,8;CL:0000235,5.84e-08,6;CL:0000945,1.78e-07,24;CL:0000826,1.78e-07,24;CL:0000084,7.31e-07,25;CL:0000827,7.31e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000049;4.73e-21;108!CL:0002057;1.32e-20;42!CL:0000051;1.01e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.24e-23!51;DOID:0060083!2.24e-23!51;DOID:1240!3.40e-23!39;DOID:8692!1.24e-19!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.95e-27;31!DOID:1240;2.95e-25;39!DOID:2531;3.25e-20;51!DOID:0060083;3.25e-20;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.75e-34,39;DOID:2531,4.07e-33,51;DOID:0060083,4.07e-33,51;DOID:8692,9.75e-28,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!4.71e-31!112;UBERON:0002371!2.76e-25!80;UBERON:0001474!3.70e-21!86;UBERON:0002405!1.77e-17!115;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0003081!6.03e-10!216;UBERON:0002384!4.13e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-09;15!UBERON:0000179;1.63e-09;15!UBERON:0000463;1.63e-09;15!UBERON:0002390;1.77e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-55,98;UBERON:0003061,1.85e-55,98;UBERON:0002193,1.09e-48,108;UBERON:0002371,4.51e-41,76;UBERON:0002405,1.48e-39,93;UBERON:0001474,2.34e-36,82;UBERON:0004765,4.37e-31,90;UBERON:0001434,9.59e-26,100;UBERON:0002384,1.95e-21,371;UBERON:0003081,1.78e-15,203;UBERON:0000178,1.53e-09,15;UBERON:0000179,1.53e-09,15;UBERON:0000463,1.53e-09,15;UBERON:0002204,1.26e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4686365874693,12.9718931330914,11.2556417278561,13.3743854128627,4.22212337906934,6.34746105595912,0,0,0,0,0.710846162437108,8.80801318004542,4.9859586767869,7.42014455639524,7.81239134577067,4.47830948479849,5.83008598834163,4.89393578504954,3.92575244704825,4.1566353805769,5.82201746850759,6.27558399645349,7.40102198439286,8.05236564327269,6.90461741573161,8.70946402198942,5.67557351732605,7.23965929546899,12.2642089880927,5.41705946377367,2.25890807451126,3.27487380069415,3.59557575112135,2.44867113896722,5.1348644332175,3.83602275479425,1.9791078011203,4.9865914405408,3.40979800426155,0.580418477257168,0.56738522469114,0.622822248995575,9.04495194924276,22.4237654920687,9.99068685643537,5.44859552370032,4.05105399586321,3.16462387440884,24.7168684984972,10.4176106982871,16.3533743496533,17.6355950899997,9.01061357049038,6.91120022797445,12.8255734683562,4.17725022118089,6.57590953552682,0,1.63841583378639,0.889509253863555,2.13365111283254,2.40237592221607,0.574752439954483,3.30522436392431,0.954053754535364,9.10740750575117,15.8554041130153,22.9363936875137,1.32171328579026,3.36305137788922,13.695972408304,1.57367816091066,0.393010762749165,1.23360899399706,3.00935691703221,0.977766799900771,1.89379122293893,1.94826728407911,7.13026924065111,2.94605907474837,3.1014745241707,3.79125409271022,3.33037431286755,4.42201781703586,2.46656856905514,3.86890024900188,2.02862160014537,1.18629250529648,0.267540828089713,2.09071047609954,5.21222976408804,1.14966148080576,2.74901956386104,1.26509846009751,1.91139248594458,0.651083453856419,1.90090408889675,2.71035214339991,2.68771883424279,3.74792179657038,0.947109008176067,0,0.80642697289893,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,34.0774763337417,40.5722287907293,28.8518774325937,3.10037811596945,5.14795419702115,3.71457501329565,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,2.31750041646231,2.12047629314376,2.5562667431294,2.69518743039963,2.52320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,26.487785964879,0.122988438543114,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0.462985512576611,0.190254152234598,0,0,9.84868024349589,29.2505331424047,14.5658539042954,0,0,0,0.0895585227028483,0,0,0.985326475791887,2.90559832243646,7.87846839054934,7.78247748451592,3.1560608356595,0.253991577168676,0.763976851116555,0,0,0.205654985406647,1.20137223137567,0.285826432630578,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,26.7572317410619,13.5609414686674,25.3000727379638,0.239624855491583,0,2.85273810081437,0,0.410952645100767,0,9.63932238344335,3.74358444383662,0.862510299438069,1.66845947163673,0,0,0,0.335032530668698,0,2.24702107184155,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,5.60856922128404,5.01619521676188,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.410635780069046,0.519254429183621,0.232420756919918,0.604297247958111,0,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0.231046011313244,0.784349769176855,1.46139224653261,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,1.75407901316748,2.0914836081992,0.256450125116389,0,0.325378394664303,0.515205058238611,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0,3.55213326462519,7.64637207142375,7.97506062043828,7.14695326373367,5.75907182320672,4.53931317834902,4.32025149790492,3.17250070517708,5.5548516986286,0,0.245040215981032,13.3778286090517,0,25.8956309788227,15.4643484546958,36.7226043436383,14.1713973897951,8.89029047440308,7.14168268604022,14.3206560837864,7.07527505002896,17.5481483265786,2.50634477090067,18.6220955581764,39.3440784004064,30.4717557858482,20.866465646826,14.0837191349864,8.90998216494528,9.61807263937388,9.67725021929069,7.81552381608161,21.4372753899337,9.84699191581699,4.05683517713975,14.3220946239063,11.278960407028,0,3.66270448179735,0,28.5295063750345,0,0,0.593929361665277,0,0,0.422008249231538,0.111308705022906,1.6480387422676,0,0.7969919530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| |||
|short_description=p2@LRRC33 | |||
}} |
Revision as of 23:33, 12 September 2013
Short description: | p2@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRRC33_5end |
Coexpression cluster: | C2737_Monocytederived_granulocyte_chronic_Dendritic_Basophils_Macrophage_CD14 |
Association with transcript: | 0bp_to_ENST00000328557_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | Q86YC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-55 | 98 |
blood island | 1.85e-55 | 98 |
hemolymphoid system | 1.09e-48 | 108 |
bone marrow | 4.51e-41 | 76 |
immune system | 1.48e-39 | 93 |
bone element | 2.34e-36 | 82 |
skeletal element | 4.37e-31 | 90 |
skeletal system | 9.59e-26 | 100 |
connective tissue | 1.95e-21 | 371 |
lateral plate mesoderm | 1.78e-15 | 203 |
blood | 1.53e-09 | 15 |
haemolymphatic fluid | 1.53e-09 | 15 |
organism substance | 1.53e-09 | 15 |
musculoskeletal system | 1.26e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.75e-34 | 39 |
hematologic cancer | 4.07e-33 | 51 |
immune system cancer | 4.07e-33 | 51 |
myeloid leukemia | 9.75e-28 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.