FFCP PHASE1:Hg19::chr4:145629311..145629322,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14866|TSSclassifier=W|UniProt=|association_with_transcript=28bp_to_ENST00000512791_5end|coexpression_cluster_id=C606|description=CAGE_peak_17_at_HHIP_5end|id=chr4:145629311..145629322,+|ontology_enrichment_celltype=CL:0002139!1.61e-34!24;CL:0000071!8.95e-27!18;CL:0002546!8.95e-27!18;CL:0000115!2.59e-24!35;CL:0002078!4.80e-18!44;CL:1000413!3.16e-16!9;CL:0000213!2.67e-15!57;CL:0000215!2.67e-15!57;CL:0000222!6.77e-13!119;CL:1000306!5.86e-10!4;CL:0002547!5.86e-10!4;CL:0002544!8.18e-10!6;CL:0005020!2.84e-09!6;CL:0002138!2.84e-09!6;CL:0005022!2.84e-09!6;CL:0002144!6.99e-08!3;CL:0000076!1.82e-07!62|ontology_enrichment_celltype_v019=CL:1000306;2.86e-30;4!CL:0002547;2.86e-30;4!CL:1000413;4.33e-14;9!CL:0002595;8.77e-12;5!CL:0002545;3.69e-08;2!CL:0000071;2.56e-07;18!CL:0000115;8.05e-07;36|ontology_enrichment_celltype_v019_2=CL:1000306,1.92e-30,4;CL:0002547,1.92e-30,4;CL:1000413,4.33e-14,9;CL:0002595,8.32e-12,5;CL:0002545,3.82e-08,2;CL:0000071,2.56e-07,18;CL:0002546,2.56e-07,18|ontology_enrichment_development_v019=UBERON:0005425;1.84e-14;1!CL:0002546;2.56e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.84e-14;1!DOID:4549;1.84e-14;1!DOID:5861;1.84e-14;1!DOID:6496;1.84e-14;1|ontology_enrichment_disease_v019_2=DOID:3371,3.15e-14,1;DOID:4549,3.15e-14,1;DOID:5861,3.15e-14,1;DOID:6496,3.15e-14,1|ontology_enrichment_uberon=UBERON:0000055!6.23e-34!69;UBERON:0002049!1.01e-31!79;UBERON:0007798!1.01e-31!79;UBERON:0001981!4.59e-29!60;UBERON:0007500!4.59e-29!60;UBERON:0004537!4.59e-29!60;UBERON:0006965!4.59e-29!60;UBERON:0004535!8.29e-27!110;UBERON:0001986!8.95e-27!18;UBERON:0004638!8.95e-27!18;UBERON:0004852!8.95e-27!18;UBERON:0004872!5.74e-26!84;UBERON:0001009!9.26e-26!113;UBERON:0001637!1.27e-25!42;UBERON:0003509!1.27e-25!42;UBERON:0004572!1.27e-25!42;UBERON:0000025!2.29e-24!194;UBERON:0004111!2.56e-21!241;UBERON:0000487!4.23e-21!22;UBERON:0000477!3.57e-20!286;UBERON:0003914!5.81e-19!118;UBERON:0004573!2.17e-18!33;UBERON:0004571!2.17e-18!33;UBERON:0006914!4.81e-18!25;UBERON:0003915!3.16e-16!9;UBERON:0004700!3.16e-16!9;UBERON:0001917!3.16e-16!9;UBERON:0000947!6.19e-16!21;UBERON:0010191!6.19e-16!21;UBERON:0000119!3.64e-15!312;UBERON:0000483!8.84e-15!309;UBERON:0000415!5.86e-10!4;UBERON:0007240!5.86e-10!4;UBERON:0005742!5.86e-10!4;UBERON:0005734!5.86e-10!4;UBERON:0004664!5.86e-10!4;UBERON:0004663!5.86e-10!4;UBERON:0000490!4.34e-08!138;UBERON:0001915!6.99e-08!3;UBERON:0001982!6.99e-08!3;UBERON:0001049!5.26e-07!57;UBERON:0005068!5.26e-07!57;UBERON:0006241!5.26e-07!57;UBERON:0007135!5.26e-07!57;UBERON:0001473!7.74e-07!8;UBERON:0004536!7.74e-07!8;UBERON:0006558!7.74e-07!8|ontology_enrichment_uberon_v019=UBERON:0004797;2.86e-30;4!UBERON:0000415;2.86e-30;4!UBERON:0007240;2.86e-30;4!UBERON:0005742;2.86e-30;4!UBERON:0005734;2.86e-30;4!UBERON:0004664;2.86e-30;4!UBERON:0004663;2.86e-30;4!UBERON:0001637;7.06e-25;42!UBERON:0003509;7.06e-25;42!UBERON:0004572;7.06e-25;42!UBERON:0004573;2.86e-16;33!UBERON:0004571;2.86e-16;33!UBERON:0000947;8.53e-16;21!UBERON:0010191;8.53e-16;21!UBERON:0000941;1.84e-14;1!UBERON:0001785;1.84e-14;1!UBERON:0002464;1.84e-14;1!UBERON:0004904;1.84e-14;1!UBERON:0001021;1.84e-14;1!UBERON:0003915;4.33e-14;9!UBERON:0004700;4.33e-14;9!UBERON:0001917;4.33e-14;9!UBERON:0007500;6.49e-12;56!UBERON:0001981;6.49e-12;56!UBERON:0004537;6.49e-12;56!UBERON:0003834;8.77e-12;5!UBERON:0001533;8.77e-12;5!UBERON:0003914;8.61e-10;74!UBERON:0003513;1.13e-08;7!UBERON:0000055;1.45e-08;65!UBERON:0005800;3.69e-08;2!UBERON:0001515;3.69e-08;2!UBERON:0003714;7.03e-08;2!UBERON:0005162;7.03e-08;2!UBERON:0000122;7.03e-08;2!UBERON:0004638;2.56e-07;18!UBERON:0001986;2.56e-07;18!UBERON:0004852;2.56e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.92e-30,4;UBERON:0007240,1.92e-30,4;UBERON:0005742,1.92e-30,4;UBERON:0005734,1.92e-30,4;UBERON:0004664,1.92e-30,4;UBERON:0004663,1.92e-30,4;UBERON:0001637,9.15e-25,42;UBERON:0003509,9.15e-25,42;UBERON:0004572,9.15e-25,42;UBERON:0004573,2.82e-19,33;UBERON:0004571,2.82e-19,33;UBERON:0004797,1.04e-17,7;UBERON:0007500,2.22e-17,59;UBERON:0001981,2.22e-17,59;UBERON:0004537,2.22e-17,59;UBERON:0006965,2.22e-17,59;UBERON:0000947,8.40e-16,21;UBERON:0010191,8.40e-16,21;UBERON:0000055,5.87e-15,68;UBERON:0004872,6.32e-15,83;UBERON:0000941,1.41e-14,1;UBERON:0001785,1.41e-14,1;UBERON:0002464,1.41e-14,1;UBERON:0004904,1.41e-14,1;UBERON:0001021,1.41e-14,1;UBERON:0003902,1.41e-14,1;UBERON:0005425,1.41e-14,1;UBERON:0003915,4.33e-14,9;UBERON:0004700,4.33e-14,9;UBERON:0001917,4.33e-14,9;UBERON:0002049,6.41e-13,78;UBERON:0007798,6.41e-13,78;UBERON:0003914,1.75e-12,117;UBERON:0003834,8.32e-12,5;UBERON:0001533,8.32e-12,5;UBERON:0004535,4.28e-11,109;UBERON:0001009,9.11e-11,112;UBERON:0003513,1.09e-08,7;UBERON:0005800,3.82e-08,2;UBERON:0001515,3.82e-08,2;UBERON:0003714,6.15e-08,2;UBERON:0005162,6.15e-08,2;UBERON:0000122,6.15e-08,2;UBERON:0004638,2.56e-07,18;UBERON:0001986,2.56e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000512791_5end | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_17_at_HHIP_5end | |||
|id=chr4:145629311..145629322,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.61e-34!24;CL:0000071!8.95e-27!18;CL:0002546!8.95e-27!18;CL:0000115!2.59e-24!35;CL:0002078!4.80e-18!44;CL:1000413!3.16e-16!9;CL:0000213!2.67e-15!57;CL:0000215!2.67e-15!57;CL:0000222!6.77e-13!119;CL:1000306!5.86e-10!4;CL:0002547!5.86e-10!4;CL:0002544!8.18e-10!6;CL:0005020!2.84e-09!6;CL:0002138!2.84e-09!6;CL:0005022!2.84e-09!6;CL:0002144!6.99e-08!3;CL:0000076!1.82e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000306;2.86e-30;4!CL:0002547;2.86e-30;4!CL:1000413;4.33e-14;9!CL:0002595;8.77e-12;5!CL:0002545;3.69e-08;2!CL:0000071;2.56e-07;18!CL:0000115;8.05e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.92e-30,4;CL:0002547,1.92e-30,4;CL:1000413,4.33e-14,9;CL:0002595,8.32e-12,5;CL:0002545,3.82e-08,2;CL:0000071,2.56e-07,18;CL:0002546,2.56e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.84e-14;1!CL:0002546;2.56e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-14;1!DOID:4549;1.84e-14;1!DOID:5861;1.84e-14;1!DOID:6496;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.15e-14,1;DOID:4549,3.15e-14,1;DOID:5861,3.15e-14,1;DOID:6496,3.15e-14,1 | |||
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|short_description=p17@HHIP | |||
}} |
Revision as of 02:38, 13 September 2013
Short description: | p17@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 28bp_to_ENST00000512791_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.92e-30 | 4 |
fibroblast of the aortic adventitia | 1.92e-30 | 4 |
endothelial cell of artery | 4.33e-14 | 9 |
smooth muscle cell of the subclavian artery | 8.32e-12 | 5 |
thoracic aorta endothelial cell | 3.82e-08 | 2 |
blood vessel endothelial cell | 2.56e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.56e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.15e-14 | 1 |
extraosseous chondrosarcoma | 3.15e-14 | 1 |
myxoid chondrosarcoma | 3.15e-14 | 1 |
extraskeletal myxoid chondrosarcoma | 3.15e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.