FFCP PHASE1:Hg19::chr5:118691664..118691675,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17260|TSSclassifier=S|UniProt=O95379|association_with_transcript=-54bp_to_ENST00000415806_5end|coexpression_cluster_id=C0|description=CAGE_peak_7_at_TNFAIP8_5end|id=chr5:118691664..118691675,+|ontology_enrichment_celltype=CL:0000738!2.34e-37!140;CL:0002087!1.05e-34!119;CL:0002057!5.03e-32!42;CL:0002194!9.40e-31!63;CL:0000576!9.40e-31!63;CL:0000040!9.40e-31!63;CL:0000559!9.40e-31!63;CL:0002009!1.53e-30!65;CL:0002031!7.25e-30!124;CL:0000766!1.16e-29!76;CL:0000860!2.61e-28!45;CL:0000557!2.97e-27!71;CL:0000839!1.43e-26!70;CL:0000037!3.83e-24!172;CL:0000566!3.83e-24!172;CL:0002032!1.51e-22!165;CL:0000837!1.51e-22!165;CL:0000988!3.74e-22!182;CL:0000134!1.07e-16!358;CL:0000763!1.95e-16!112;CL:0000049!1.95e-16!112;CL:0002320!2.04e-16!365;CL:0000048!1.27e-15!430;CL:0000723!5.83e-15!436;CL:0000034!1.43e-14!444;CL:0000219!8.58e-12!390;CL:0000945!3.23e-11!24;CL:0000826!3.23e-11!24;CL:0000236!7.67e-09!14;CL:0002393!7.80e-07!9;CL:0002397!7.80e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.73e-56;33!CL:0002057;1.73e-56;33!CL:0000473;2.37e-47;39!CL:0000234;2.37e-47;39!CL:0000576;2.51e-45;48!CL:0000766;3.86e-26;69!CL:0002087;1.93e-17;104!CL:0000738;4.89e-17;136!CL:0000451;3.69e-13;10!CL:0000763;2.61e-12;100!CL:0000236;2.75e-12;13!CL:0002393;3.32e-12;6!CL:0002397;3.32e-12;6!CL:0000945;2.06e-10;24!CL:0000990;5.43e-10;8!CL:0000988;9.92e-09;177!CL:0000219;1.30e-08;193!CL:0000840;1.88e-08;5|ontology_enrichment_celltype_v019_2=CL:0002009,1.45e-75,61;CL:0002194,3.48e-75,59;CL:0000576,3.48e-75,59;CL:0000040,3.48e-75,59;CL:0000559,3.48e-75,59;CL:0000860,3.27e-71,42;CL:0002057,3.27e-71,42;CL:0000473,5.75e-71,48;CL:0000234,5.75e-71,48;CL:0000557,1.65e-67,67;CL:0000766,3.30e-67,72;CL:0000738,2.63e-66,136;CL:0000839,1.03e-65,66;CL:0002087,5.72e-63,115;CL:0002031,1.84e-57,120;CL:0000037,6.46e-50,168;CL:0000988,2.26e-46,177;CL:0002032,5.34e-46,161;CL:0000837,5.34e-46,161;CL:0000763,2.62e-45,108;CL:0000049,2.62e-45,108;CL:0000134,1.46e-22,354;CL:0002320,1.04e-21,361;CL:0000219,1.03e-18,386;CL:0000048,8.09e-18,427;CL:0000034,2.34e-17,441;CL:0000723,2.87e-17,433;CL:0000451,2.44e-13,10;CL:0000236,2.75e-11,14;CL:0000945,1.89e-10,24;CL:0000826,1.89e-10,24;CL:0000990,3.75e-10,8;CL:0002393,4.29e-10,9;CL:0002397,4.29e-10,9;CL:0000840,1.65e-08,5;CL:0001029,1.65e-08,5|ontology_enrichment_development_v019=CL:0002057;3.05e-50;42!CL:0000049;1.66e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.66e-29!102;UBERON:0003061!3.66e-29!102;UBERON:0002193!2.30e-27!112;UBERON:0002371!1.73e-24!80;UBERON:0001474!3.21e-22!86;UBERON:0004765!3.88e-19!101;UBERON:0001434!3.88e-19!101;UBERON:0002405!5.29e-19!115;UBERON:0002384!3.16e-15!375;UBERON:0002204!7.96e-14!167;UBERON:0003081!1.12e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.58e-58,76;UBERON:0001474,1.71e-52,82;UBERON:0002390,1.64e-51,98;UBERON:0003061,1.64e-51,98;UBERON:0002405,1.37e-48,93;UBERON:0002193,3.82e-47,108;UBERON:0004765,1.60e-46,90;UBERON:0001434,2.51e-42,100;UBERON:0002204,1.57e-23,167;UBERON:0003081,2.57e-21,203;UBERON:0002384,1.51e-20,371;UBERON:0000926,7.08e-13,315;UBERON:0004120,7.08e-13,315;UBERON:0006603,7.08e-13,315|phase1_expression=0.54503513781167,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,3.51501666440576,2.62721886239826,3.14843125254717,0.786728553697808,0.383829398097213,1.70297735647684,0,0,0,0,0.284338464974843,0,19.9438347071476,12.6343001906189,9.11445657006578,3.13481663935894,1.29557466407592,1.54545340580512,2.03557534291391,1.88937971844405,2.42584061187816,9.76201955003875,7.40102198439286,11.1494293522237,18.1246207162955,12.5518746199259,11.8241114944293,23.7874519708267,19.3645405075148,23.0225027210381,3.38836211176688,1.91034305040492,8.98893937780339,22.9562919278177,15.4045932996525,14.7047538933779,5.93732340336089,6.78176435913548,4.68847225585964,46.1432689419449,28.369261234557,36.7465126907389,8.79370328398601,6.25779502104242,8.90474263290978,35.1131711527354,35.7229306907938,53.1656810900686,1.05627643155971,1.06302149982522,1.25795187305026,0.786300418025466,1.80212271409808,1.6072558669708,0.570025487482497,1.19350006319454,0.91332076882317,8.79981222306614,4.91524750135918,6.22656477704488,5.12076267079809,5.20514783146816,4.59801951963587,3.96626923670917,4.77026877267682,0.569212969109448,4.11066032559657,0.764546456250458,0,5.04457706683382,0.790152254325231,0,0.393010762749165,0.616804496998528,0,0,0.473447805734733,0,0.891283655081389,0,0,0,0.640456598628376,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0.43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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=S | |||
|UniProt=O95379 | |||
|association_with_transcript=-54bp_to_ENST00000415806_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_TNFAIP8_5end | |||
|id=chr5:118691664..118691675,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.34e-37!140;CL:0002087!1.05e-34!119;CL:0002057!5.03e-32!42;CL:0002194!9.40e-31!63;CL:0000576!9.40e-31!63;CL:0000040!9.40e-31!63;CL:0000559!9.40e-31!63;CL:0002009!1.53e-30!65;CL:0002031!7.25e-30!124;CL:0000766!1.16e-29!76;CL:0000860!2.61e-28!45;CL:0000557!2.97e-27!71;CL:0000839!1.43e-26!70;CL:0000037!3.83e-24!172;CL:0000566!3.83e-24!172;CL:0002032!1.51e-22!165;CL:0000837!1.51e-22!165;CL:0000988!3.74e-22!182;CL:0000134!1.07e-16!358;CL:0000763!1.95e-16!112;CL:0000049!1.95e-16!112;CL:0002320!2.04e-16!365;CL:0000048!1.27e-15!430;CL:0000723!5.83e-15!436;CL:0000034!1.43e-14!444;CL:0000219!8.58e-12!390;CL:0000945!3.23e-11!24;CL:0000826!3.23e-11!24;CL:0000236!7.67e-09!14;CL:0002393!7.80e-07!9;CL:0002397!7.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-56;33!CL:0002057;1.73e-56;33!CL:0000473;2.37e-47;39!CL:0000234;2.37e-47;39!CL:0000576;2.51e-45;48!CL:0000766;3.86e-26;69!CL:0002087;1.93e-17;104!CL:0000738;4.89e-17;136!CL:0000451;3.69e-13;10!CL:0000763;2.61e-12;100!CL:0000236;2.75e-12;13!CL:0002393;3.32e-12;6!CL:0002397;3.32e-12;6!CL:0000945;2.06e-10;24!CL:0000990;5.43e-10;8!CL:0000988;9.92e-09;177!CL:0000219;1.30e-08;193!CL:0000840;1.88e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.45e-75,61;CL:0002194,3.48e-75,59;CL:0000576,3.48e-75,59;CL:0000040,3.48e-75,59;CL:0000559,3.48e-75,59;CL:0000860,3.27e-71,42;CL:0002057,3.27e-71,42;CL:0000473,5.75e-71,48;CL:0000234,5.75e-71,48;CL:0000557,1.65e-67,67;CL:0000766,3.30e-67,72;CL:0000738,2.63e-66,136;CL:0000839,1.03e-65,66;CL:0002087,5.72e-63,115;CL:0002031,1.84e-57,120;CL:0000037,6.46e-50,168;CL:0000988,2.26e-46,177;CL:0002032,5.34e-46,161;CL:0000837,5.34e-46,161;CL:0000763,2.62e-45,108;CL:0000049,2.62e-45,108;CL:0000134,1.46e-22,354;CL:0002320,1.04e-21,361;CL:0000219,1.03e-18,386;CL:0000048,8.09e-18,427;CL:0000034,2.34e-17,441;CL:0000723,2.87e-17,433;CL:0000451,2.44e-13,10;CL:0000236,2.75e-11,14;CL:0000945,1.89e-10,24;CL:0000826,1.89e-10,24;CL:0000990,3.75e-10,8;CL:0002393,4.29e-10,9;CL:0002397,4.29e-10,9;CL:0000840,1.65e-08,5;CL:0001029,1.65e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-50;42!CL:0000049;1.66e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.66e-29!102;UBERON:0003061!3.66e-29!102;UBERON:0002193!2.30e-27!112;UBERON:0002371!1.73e-24!80;UBERON:0001474!3.21e-22!86;UBERON:0004765!3.88e-19!101;UBERON:0001434!3.88e-19!101;UBERON:0002405!5.29e-19!115;UBERON:0002384!3.16e-15!375;UBERON:0002204!7.96e-14!167;UBERON:0003081!1.12e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.58e-58,76;UBERON:0001474,1.71e-52,82;UBERON:0002390,1.64e-51,98;UBERON:0003061,1.64e-51,98;UBERON:0002405,1.37e-48,93;UBERON:0002193,3.82e-47,108;UBERON:0004765,1.60e-46,90;UBERON:0001434,2.51e-42,100;UBERON:0002204,1.57e-23,167;UBERON:0003081,2.57e-21,203;UBERON:0002384,1.51e-20,371;UBERON:0000926,7.08e-13,315;UBERON:0004120,7.08e-13,315;UBERON:0006603,7.08e-13,315 | |||
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| |||
|short_description=p7@TNFAIP8 | |||
}} |
Revision as of 12:48, 13 September 2013
Short description: | p7@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -54bp_to_ENST00000415806_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.58e-58 | 76 |
bone element | 1.71e-52 | 82 |
hematopoietic system | 1.64e-51 | 98 |
blood island | 1.64e-51 | 98 |
immune system | 1.37e-48 | 93 |
hemolymphoid system | 3.82e-47 | 108 |
skeletal element | 1.60e-46 | 90 |
skeletal system | 2.51e-42 | 100 |
musculoskeletal system | 1.57e-23 | 167 |
lateral plate mesoderm | 2.57e-21 | 203 |
connective tissue | 1.51e-20 | 371 |
mesoderm | 7.08e-13 | 315 |
mesoderm-derived structure | 7.08e-13 | 315 |
presumptive mesoderm | 7.08e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.