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FFCP PHASE1:Mm9::chr19:7557575..7557613,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20168|HGNC=|UniProt=Q9ES97|association_with_transcript=0bp_to_ENSMUST00000088169_5end|description=CAGE_peak_3_at_Rtn3_5end|id=chr19:7557575..7557613,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.55e-14!102;UBERON:0000924!5.55e-14!102;UBERON:0006601!5.55e-14!102;UBERON:0007023!6.97e-14!51;UBERON:0000073!1.33e-10!75;UBERON:0001016!1.33e-10!75;UBERON:0001017!4.15e-10!73;UBERON:0005743!4.15e-10!73;UBERON:0002346!4.41e-10!71;UBERON:0003075!4.41e-10!71;UBERON:0007284!4.41e-10!71;UBERON:0000033!2.53e-09!63;UBERON:0001049!2.93e-08!52;UBERON:0005068!2.93e-08!52;UBERON:0006241!2.93e-08!52;UBERON:0007135!2.93e-08!52;UBERON:0002020!3.35e-08!34;UBERON:0000955!4.09e-08!50;UBERON:0006238!4.09e-08!50;UBERON:0002616!1.11e-07!49;UBERON:0002021!1.24e-07!10;UBERON:0000411!1.24e-07!10;UBERON:0001950!1.24e-07!10;UBERON:0003056!4.44e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.97e-14,51;UBERON:0004121,3.18e-13,95;UBERON:0000924,3.18e-13,95;UBERON:0006601,3.18e-13,95;UBERON:0001016,1.33e-10,75;UBERON:0010314,2.69e-10,92;UBERON:0001017,4.15e-10,73;UBERON:0002346,1.72e-09,64;UBERON:0003075,1.72e-09,64;UBERON:0007284,1.72e-09,64;UBERON:0010371,2.29e-09,73;UBERON:0000073,3.21e-09,54;UBERON:0001049,2.93e-08,52;UBERON:0005068,2.93e-08,52;UBERON:0006241,2.93e-08,52;UBERON:0007135,2.93e-08,52;UBERON:0002020,3.35e-08,34;UBERON:0002021,1.24e-07,10;UBERON:0000411,1.24e-07,10;UBERON:0001950,1.24e-07,10;UBERON:0003056,4.44e-07,49;UBERON:0000955,8.20e-07,47;UBERON:0006238,8.20e-07,47|phase1_expression=47.404058743019,92.4784830244307,95.5498402718026,95.2762265616515,101.681833179108,61.2759342478398,64.7107014449606,0.645616617207881,12.8117737158017,12.8735489477096,4.45166717386313,7.6581272635523,0.171200729931206,0.874204024189974,22.6514638034651,16.6029719259657,7.69518065940961,2.05050407482854,2.05671650408608,2.97072756258621,62.8469914216406,25.5177744586275,30.2991755401165,131.51377153618,132.827973737891,112.549464966544,99.0752591165872,97.3929971740218,227.268009669823,140.884842535801,112.86082992355,7.62036808151557,7.99584223859941,0,62.6808014860266,75.1380597020385,67.5800569228442,3.76678467663217,3.906676722619,4.71171369576418,5.29408339227913,3.41522742479223,2.91306211818692,123.001191162139,103.100339050246,81.6783047119483,34.4252191513137,61.4830940992859,87.2154145455853,102.075697013999,74.4727763046929,89.1265899062824,1.34226084846189,0.725362142011344,1.34437519656986,116.281265088248,137.249517730664,85.085895225778,81.3312172655583,94.1603943104219,96.9762047364454,50.8266798103698,52.4683929705572,49.0445345918362,73.1761108299561,56.1279290807419,57.2236211090153,49.5641613864805,42.3053618218589,46.4420427861016,48.1644161494665,128.257291997308,130.0915706205,52.5485528632153,50.7980996396653,66.1837526359215,208.119015088845,164.078229439466,171.271284580711,78.8680000626559,79.2282993596868,64.0723445784815,135.124571516668,164.889444739282,153.562239015694,145.251892638518,111.477026065698,82.7613539464335,80.7998482865074,120.990067730964,55.6539818307221,45.6024654800135,52.3577926954968,62.6055702299868,63.6780889098716,73.476409483963,68.3964326041632,171.96419548126,153.793314724898,155.82275235906,54.647246873352,68.0130330295885,84.0857291031931,106.660005473,75.9883553949361,81.8352365484568,72.289995637114,83.5825999543519,25.1169747137757,92.331010498321,62.4547176358089,86.7726613189602,76.5643450890114,72.1961448247062,68.7893936743873,80.6779516336517,84.5406789651559,184.942577500567,30.0767587662957,55.3242626820139,30.6969710659947,30.547140947519,208.758772564297,82.8569655542678,86.08259650033,134.625868094928,16.534487181817,10.1983464268879,15.8837783841331,193.679296750436,193.522754992279,49.2565060282428,239.356088904765,186.672283851141,186.593664014485,164.99936453991,48.5773765566009,47.3990558024454,111.703459227684,311.874830423754,74.1686524887411,70.3500439566427,84.8092631383195,68.7213969330861,67.0839881632093,69.5657501146734,72.6188365337898,163.500530307058,26.2992951378068,31.0133971475224,36.9497360744293,55.0181288393213,53.941166349766,80.7945026331426,93.6308720656143,30.651277090048,11.937624184325,12.0953516343916,9.09323198065896,63.1733606233281,65.6672967947069,73.6453831375551,72.6806338246596,74.573643832266,69.2659336864328,63.0166990273605,64.9221631387078,62.8197541935372,64.0137816163439,69.6070047695364,67.7735247803354,67.8367941653542,74.4274890836662,58.6482049982825,237.207061980336,68.019948782707,295.063973204532,142.53885543165,31.7799493297499,43.6604943097624,55.0264059845339,60.5050573870028,58.263047487356,70.3834816616469,132.868137232463,81.5259825883854,85.2026357832914,90.5251947787236,88.5136955520805,152.799299471218,144.164079266421,133.026370533917,63.9180826211885,50.4978425735001,68.7517187605791,62.7246089763568,69.0470854316748,64.2444110195318,74.8088234179964,106.57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|EntrezGene=20168
|HGNC=
|UniProt=Q9ES97
|association_with_transcript=0bp_to_ENSMUST00000088169_5end
|description=CAGE_peak_3_at_Rtn3_5end
|id=chr19:7557575..7557613,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.55e-14!102;UBERON:0000924!5.55e-14!102;UBERON:0006601!5.55e-14!102;UBERON:0007023!6.97e-14!51;UBERON:0000073!1.33e-10!75;UBERON:0001016!1.33e-10!75;UBERON:0001017!4.15e-10!73;UBERON:0005743!4.15e-10!73;UBERON:0002346!4.41e-10!71;UBERON:0003075!4.41e-10!71;UBERON:0007284!4.41e-10!71;UBERON:0000033!2.53e-09!63;UBERON:0001049!2.93e-08!52;UBERON:0005068!2.93e-08!52;UBERON:0006241!2.93e-08!52;UBERON:0007135!2.93e-08!52;UBERON:0002020!3.35e-08!34;UBERON:0000955!4.09e-08!50;UBERON:0006238!4.09e-08!50;UBERON:0002616!1.11e-07!49;UBERON:0002021!1.24e-07!10;UBERON:0000411!1.24e-07!10;UBERON:0001950!1.24e-07!10;UBERON:0003056!4.44e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.97e-14,51;UBERON:0004121,3.18e-13,95;UBERON:0000924,3.18e-13,95;UBERON:0006601,3.18e-13,95;UBERON:0001016,1.33e-10,75;UBERON:0010314,2.69e-10,92;UBERON:0001017,4.15e-10,73;UBERON:0002346,1.72e-09,64;UBERON:0003075,1.72e-09,64;UBERON:0007284,1.72e-09,64;UBERON:0010371,2.29e-09,73;UBERON:0000073,3.21e-09,54;UBERON:0001049,2.93e-08,52;UBERON:0005068,2.93e-08,52;UBERON:0006241,2.93e-08,52;UBERON:0007135,2.93e-08,52;UBERON:0002020,3.35e-08,34;UBERON:0002021,1.24e-07,10;UBERON:0000411,1.24e-07,10;UBERON:0001950,1.24e-07,10;UBERON:0003056,4.44e-07,49;UBERON:0000955,8.20e-07,47;UBERON:0006238,8.20e-07,47
|phase1_expression=47.404058743019,92.4784830244307,95.5498402718026,95.2762265616515,101.681833179108,61.2759342478398,64.7107014449606,0.645616617207881,12.8117737158017,12.8735489477096,4.45166717386313,7.6581272635523,0.171200729931206,0.874204024189974,22.6514638034651,16.6029719259657,7.69518065940961,2.05050407482854,2.05671650408608,2.97072756258621,62.8469914216406,25.5177744586275,30.2991755401165,131.51377153618,132.827973737891,112.549464966544,99.0752591165872,97.3929971740218,227.268009669823,140.884842535801,112.86082992355,7.62036808151557,7.99584223859941,0,62.6808014860266,75.1380597020385,67.5800569228442,3.76678467663217,3.906676722619,4.71171369576418,5.29408339227913,3.41522742479223,2.91306211818692,123.001191162139,103.100339050246,81.6783047119483,34.4252191513137,61.4830940992859,87.2154145455853,102.075697013999,74.4727763046929,89.1265899062824,1.34226084846189,0.725362142011344,1.34437519656986,116.281265088248,137.249517730664,85.085895225778,81.3312172655583,94.1603943104219,96.9762047364454,50.8266798103698,52.4683929705572,49.0445345918362,73.1761108299561,56.1279290807419,57.2236211090153,49.5641613864805,42.3053618218589,46.4420427861016,48.1644161494665,128.257291997308,130.0915706205,52.5485528632153,50.7980996396653,66.1837526359215,208.119015088845,164.078229439466,171.271284580711,78.8680000626559,79.2282993596868,64.0723445784815,135.124571516668,164.889444739282,153.562239015694,145.251892638518,111.477026065698,82.7613539464335,80.7998482865074,120.990067730964,55.6539818307221,45.6024654800135,52.3577926954968,62.6055702299868,63.6780889098716,73.476409483963,68.3964326041632,171.96419548126,153.793314724898,155.82275235906,54.647246873352,68.0130330295885,84.0857291031931,106.660005473,75.9883553949361,81.8352365484568,72.289995637114,83.5825999543519,25.1169747137757,92.331010498321,62.4547176358089,86.7726613189602,76.5643450890114,72.1961448247062,68.7893936743873,80.6779516336517,84.5406789651559,184.942577500567,30.0767587662957,55.3242626820139,30.6969710659947,30.547140947519,208.758772564297,82.8569655542678,86.08259650033,134.625868094928,16.534487181817,10.1983464268879,15.8837783841331,193.679296750436,193.522754992279,49.2565060282428,239.356088904765,186.672283851141,186.593664014485,164.99936453991,48.5773765566009,47.3990558024454,111.703459227684,311.874830423754,74.1686524887411,70.3500439566427,84.8092631383195,68.7213969330861,67.0839881632093,69.5657501146734,72.6188365337898,163.500530307058,26.2992951378068,31.0133971475224,36.9497360744293,55.0181288393213,53.941166349766,80.7945026331426,93.6308720656143,30.651277090048,11.937624184325,12.0953516343916,9.09323198065896,63.1733606233281,65.6672967947069,73.6453831375551,72.6806338246596,74.573643832266,69.2659336864328,63.0166990273605,64.9221631387078,62.8197541935372,64.0137816163439,69.6070047695364,67.7735247803354,67.8367941653542,74.4274890836662,58.6482049982825,237.207061980336,68.019948782707,295.063973204532,142.53885543165,31.7799493297499,43.6604943097624,55.0264059845339,60.5050573870028,58.263047487356,70.3834816616469,132.868137232463,81.5259825883854,85.2026357832914,90.5251947787236,88.5136955520805,152.799299471218,144.164079266421,133.026370533917,63.9180826211885,50.4978425735001,68.7517187605791,62.7246089763568,69.0470854316748,64.2444110195318,74.8088234179964,106.574526841273,131.564933931072,141.659944182227,58.4011675361683,30.5326543460452,29.6804082620937,29.4569367224158,32.4576194221605,38.8295227201391,29.2819729548633,31.3588789821384,26.4280419643308,33.2219309957579,43.1304619582064,46.1454775108944,46.4936132940695,50.7683544673695,41.9789947641274,62.7176577772377,84.9864674766382,43.5830247072115,50.356177720586,42.2665263580218,46.7033594094119,59.7997339067282,63.7956957574517,53.2714858651791,57.2215573105473,55.5876371018425,42.4149684628916,65.5453258862952,67.5198279095652,66.9725141232399,42.2215595029962,48.4076058598651,117.53166125155,106.235647327322,144.816632168988,135.262286327402,120.492184851856,49.2318308048527,62.7861356638351,70.6694127176916,81.430044342998,65.2384818410467,77.3111399065908,65.1076020814315,70.0322513897567,70.7259176145375,69.5706489185881,165.159156640809,69.6925818372599,46.1189913498191,42.6763833506369,75.2263760754762,90.2666940711747,46.3711015056015,41.1160037472061,55.2612883684781,65.5570202195316,63.639075624393,60.2137923081955,66.890206223861,67.734501893097,67.9479029562004,80.1181425169991,81.4770791660676,71.4923172082955,61.9410163467707,59.5049945400671,57.6566624234983,59.9409989710885,53.6890140982232,52.6556865926787,44.4518825707315,156.995372694622,130.276723581249,90.1961148044794,92.8309604060533,88.3210414026603,62.9063807000666,61.8348741936247,53.1816515173998,114.551968795531,147.227689796345,24.2636650732951,32.1963514022627,35.5573492549846,28.2552685507037,23.5114071680163,18.7598102029349,17.677756719361,19.3133004206648,17.8277966207707,212.89154781737,42.5471911366627,52.0497835844733,57.7828573396637,68.3718727967313,86.4715752434863,98.8555659000736,89.6789994619895,122.501780848526,212.827786145124,147.257417201601,2.81846469342095,29.0062099325319,35.573575448276,35.5845674669607,39.5229059841857,42.5769436236761,37.202244650704,27.8637383566053,25.0613833177449,12.0792060413003,10.0810502190253,14.5365115488962,35.4769126757787,31.6349748067668,17.7991527479579,19.692936523423,16.490552446845,11.0579813558371,10.6336459565696,10.0966449948148,10.6689529317,8.36857336635776,7.50425681696094,6.25376970662141,7.71387554398355,99.5346384070778,72.3674207999451,57.9551513697213,77.2269235274761,77.4690272069084,137.383572030265,112.638248924368,145.984866152844,102.320709223214,171.684560155588,152.827978520383,175.306027112455,183.023639196027,231.557891682477,248.524592241211,217.357245074641,244.974734553976,280.948293570207,300.818741127807,21.7953429926771,41.0995619603062,42.5126678327794,67.826774062054,31.2323612315694,37.5040757238029,79.119835097375,67.1674286598795,78.6252063499947,72.0187053526823,67.1720144709135,65.4533404609684,57.6831686014476,58.9671653648846,56.286759576501,62.3944735580827,60.4916181432146,56.1365831549382,60.1645415172828,64.9147237792692,76.8027125343331,53.2427418478012,54.1250151180419,72.2371690662673,63.5238317803482,66.5916964107494,59.8174471293966,57.6122668048876,60.1612224337168,93.7107593668423,58.2497938989695,56.2460594364467,58.1108081300959,59.030936491853,65.7811543445692,75.6926051151976,69.2437560998409,72.8412873223731,78.2369278161569,81.6188250742207,78.139460604082
|short_description=p3@Rtn3
}}

Revision as of 18:25, 13 September 2013

Short description:p3@Rtn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rtn3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000088169_5end
EntrezGene:Rtn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rtn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G747.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I592.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I695.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I395.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I4101.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I761.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I864.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.60
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A362.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1131.51
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2132.83
GP2+ M cell, pool1.CNhs13228.11845-124H9112.55
GP2+ M cell, pool2.CNhs13231.11846-124I199.08
GP2+ M cell, pool3.CNhs13240.11847-124I297.39
Ileum epithelium, pool1.CNhs13199.10252-104B9227.27
Ileum epithelium, pool2.CNhs13232.10253-104C1140.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8112.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F562.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F675.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F767.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8123.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9103.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B381.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B734.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C261.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B887.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3102.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C474.47
Mouse Astrocytes, donor3.CNhs12107.11633-122C489.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1116.28
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1137.25
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C585.09
Mouse Granule cells, donor1.CNhs12131.11713-123C381.33
Mouse Granule cells, donor2.CNhs12357.11731-123E394.16
Mouse Granule cells, donor3.CNhs12108.11636-122C796.98
Mouse Meningeal cells, donor1.CNhs12132.11716-123C650.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D152.47
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C749.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E773.18
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D256.13
Mouse Microglia, donor1.CNhs12629.11718-123C857.22
Mouse Microglia, donor2.CNhs12634.11736-123E849.56
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F546.44
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.16
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1128.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5130.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D252.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F250.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D666.18
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3208.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3164.08
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7171.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D478.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F479.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D864.07
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4135.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5164.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6153.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6145.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6111.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E182.76
Mouse Schwann, donor1.CNhs12507.11728-123D980.80
Mouse Schwann, donor2.CNhs12573.11746-123F9120.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G355.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C452.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C862.61
Mouse hepatocyte, donor6.CNhs13090.11822-124F463.68
Mouse hepatocyte, donor8.CNhs13091.11824-124F673.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7171.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3153.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8155.82
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G654.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H168.01
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I884.09
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6106.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G175.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G281.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G372.29
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B683.58
accessory axillary lymph node, adult.CNhs10475.1063-29H925.12
adrenal gland, adult.CNhs10508.49-24D792.33
adrenal gland, embryo E14.CNhs11038.406-44C562.45
adrenal gland, embryo E16.CNhs11004.1254-43D686.77
adrenal gland, embryo E17.CNhs11043.1263-45I176.56
adrenal gland, embryo E18.CNhs11026.1262-18F572.20
adrenal gland, neonate N00.CNhs11191.1311-23C168.79
adrenal gland, neonate N25.CNhs11223.1377-27I380.68
amnion, adult pregnant day17.5.CNhs10488.583-22A884.54
aorta, adult.CNhs10498.46-23H1184.94
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F555.32
bone (os femoris), neonate N16.CNhs11225.1525-43A630.70
bone (os femoris), neonate N20.CNhs11195.1350-25C330.55
cecum, adult.CNhs10467.37-13H4208.76
cerebellum, adult.CNhs10494.15-8B282.86
cerebellum, neonate N30.CNhs11135.1395-42I286.08
colon, adult.CNhs10468.36-18H7134.63
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.88
corpora quadrigemina, adult.CNhs10501.16-22A4193.68
corpus striatum, adult.CNhs10487.19-21D8193.52
corpus striatum, neonate N00.CNhs11226.630-43F149.26
cortex, adult.CNhs10473.12-14D5239.36
cortex, neonate N30.CNhs11107.1392-42F2186.67
diencephalon, adult.CNhs10482.20-12F2186.59
diencephalon, neonate N30.CNhs11201.1388-42B2165.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B148.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A247.40
epididymis, adult.CNhs10490.58-23B2111.70
eyeball, adult.CNhs10484.31-12G4311.87
eyeball, embryo E12.CNhs11016.345-16C674.17
eyeball, embryo E14.CNhs10521.399-16E270.35
eyeball, embryo E15.CNhs10593.426-16C984.81
eyeball, embryo E17.CNhs11023.1261-18D468.72
eyeball, neonate N00.CNhs11207.633-15C667.08
eyeball, neonate N01.CNhs11140.1532-43E769.57
eyeball, neonate N02.CNhs11205.1551-44G872.62
eyeball, neonate N16.CNhs11188.777-19A2163.50
forelimb, embryo E11.CNhs10596.335-25E226.30
forelimb, embryo E12.CNhs10600.359-14H231.01
forelimb, embryo E13.CNhs10589.384-1E236.95
forelimb, embryo E14.CNhs10577.413-26A855.02
forelimb, embryo E15.CNhs11007.437-20E753.94
forelimb, embryo E17.CNhs10598.1517-43C480.79
forelimb, embryo E18.CNhs11008.1520-43B593.63
gonad, embryo E13.CNhs11044.1564-45I630.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E963.17
heart, embryo E12.CNhs11015.353-12F565.67
heart, embryo E13.CNhs11013.376-3I973.65
heart, embryo E14.CNhs10597.403-26D472.68
heart, embryo E15.CNhs11017.431-16C874.57
heart, embryo E16.CNhs11021.457-17C669.27
heart, embryo E17.CNhs11025.479-18E563.02
heart, embryo E18.CNhs11030.1283-20G364.92
heart, neonate N00.CNhs11213.639-21E362.82
heart, neonate N03.CNhs11221.1349-25I264.01
heart, neonate N10.CNhs11118.749-24G169.61
heart, neonate N16.CNhs11209.782-15G167.77
heart, neonate N20.CNhs11127.821-26I667.84
heart, neonate N25.CNhs11196.1351-25D374.43
heart, neonate N30.CNhs11202.1390-42D258.65
hippocampus, adult.CNhs10478.13-16E8237.21
hippocampus, neonate N00.CNhs11228.627-43G168.02
intestinal mucosa, adult.CNhs10506.860-29I3295.06
intestine, adult.CNhs10496.178-9A3142.54
intestine, embryo E12.CNhs11019.1251-16I531.78
intestine, embryo E13.CNhs11010.381-16D543.66
intestine, embryo E15.CNhs10602.976-16D855.03
intestine, embryo E16.CNhs10585.463-22H460.51
intestine, embryo E17.CNhs10582.482-18D358.26
intestine, embryo E18.CNhs10526.1289-20F770.38
intestine, neonate N00.CNhs11126.644-26D1132.87
intestine, neonate N01.CNhs11192.1322-23E981.53
intestine, neonate N06.CNhs11102.688-20B885.20
intestine, neonate N07.CNhs11095.720-20F290.53
intestine, neonate N10.CNhs11098.755-23A588.51
intestine, neonate N20.CNhs11187.827-18D1152.80
intestine, neonate N25.CNhs11121.1352-25E3144.16
intestine, neonate N30.CNhs11131.1384-42G1133.03
kidney, embryo E14.CNhs10606.411-4I963.92
kidney, embryo E15.CNhs10997.434-16F850.50
kidney, embryo E16.CNhs10584.464-22A568.75
kidney, embryo E17.CNhs11028.483-18I262.72
kidney, embryo E18.CNhs11001.1288-20C769.05
kidney, neonate N00.CNhs11214.646-21G764.24
kidney, neonate N10.CNhs11206.758-6D574.81
kidney, neonate N20.CNhs11113.832-19I1106.57
kidney, neonate N25.CNhs11122.1353-25F3131.56
kidney, neonate N30.CNhs11203.1385-42H1141.66
liver, adult pregnant day01.CNhs10466.508-5B258.40
liver, embryo E12.CNhs10601.355-15F830.53
liver, embryo E13.CNhs10524.378-3H629.68
liver, embryo E14.CNhs10594.409-16E129.46
liver, embryo E15.CNhs10520.433-16D732.46
liver, embryo E16.CNhs10523.462-17F538.83
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F426.43
liver, neonate N03.CNhs11123.1345-25G233.22
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H246.15
liver, neonate N10.CNhs11115.751-24B946.49
liver, neonate N20.CNhs11220.823-25A350.77
liver, neonate N25.CNhs11198.1368-26H141.98
liver, neonate N30.CNhs11106.1382-42D162.72
lung, adult.CNhs10474.28-22B184.99
lung, embryo E12.CNhs10522.354-16G243.58
lung, embryo E14.CNhs10604.404-26F850.36
lung, embryo E15.CNhs11020.432-17C542.27
lung, embryo E16.CNhs10998.458-17B646.70
lung, embryo E17.CNhs10605.480-44A659.80
lung, embryo E18.CNhs10583.1287-20I663.80
lung, neonate N00.CNhs11224.640-42C653.27
lung, neonate N06.CNhs11212.683-20E557.22
lung, neonate N07.CNhs11111.715-19A355.59
lung, neonate N10.CNhs11219.750-23E642.41
lung, neonate N20.CNhs11109.822-18A465.55
lung, neonate N25.CNhs11119.1359-25C767.52
lung, neonate N30.CNhs11133.1394-42H266.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.41
mammary gland, adult lactating day02.CNhs10480.595-22B6117.53
mammary gland, adult pregnant day19.CNhs10476.588-5H2106.24
medulla oblongata, adult.CNhs10477.17-12C2144.82
medulla oblongata, neonate N30.CNhs11200.1396-42A3135.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7120.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E162.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E270.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E381.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D765.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D877.31
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D470.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D570.73
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D669.57
olfactory brain, adult.CNhs10489.18-22I9165.16
ovary, adult.CNhs10507.91-2I769.69
ovary, embryo E18.CNhs11040.505-44H746.12
ovary, neonate N00.CNhs11217.1299-22I442.68
oviduct, adult pregnant day01.CNhs10500.988-6G675.23
pancreas, adult.CNhs10486.34-16E490.27
pancreas, embryo E14.CNhs11012.405-44F446.37
pancreas, embryo E15.CNhs11042.1556-45F241.12
pancreas, embryo E16.CNhs11003.460-26E555.26
pancreas, embryo E17.CNhs10599.1558-45G365.56
pancreas, embryo E18.CNhs10580.1535-43I763.64
pancreas, neonate N00.CNhs11105.645-26G960.21
pancreas, neonate N01.CNhs11138.1531-43D766.89
pancreas, neonate N02.CNhs11139.1539-43D867.73
pancreas, neonate N16.CNhs11136.787-43B667.95
pancreas, neonate N25.CNhs11094.1555-45E280.12
pancreas, neonate N30.CNhs11182.1548-44H581.48
pituitary gland, adult.CNhs10493.21-1G871.49
pituitary gland, embryo E12.CNhs11018.346-16E661.94
pituitary gland, embryo E13.CNhs11009.370-44C759.50
pituitary gland, embryo E14.CNhs11037.398-44A557.66
pituitary gland, embryo E15.CNhs10592.427-16B959.94
pituitary gland, embryo E16.CNhs11036.449-43F653.69
pituitary gland, embryo E17.CNhs11039.1265-44F552.66
pituitary gland, neonate N00.CNhs11190.1308-22E944.45
placenta, adult pregnant day10.CNhs10472.539-13I7157.00
placenta, adult pregnant day17.CNhs10464.577-18G3130.28
prostate, adult.CNhs10470.859-1F890.20
skin, adult.CNhs10492.30-1C392.83
skin, neonate N00.CNhs11124.650-25G488.32
skin, neonate N03.CNhs11215.662-22H362.91
skin, neonate N06.CNhs11097.693-20I561.83
skin, neonate N10.CNhs11108.762-6C453.18
small intestine, neonate N16.CNhs11114.790-21I1114.55
spinal cord, adult.CNhs10505.24-13C9147.23
spleen, adult.CNhs10465.25-2G224.26
spleen, embryo E16.CNhs11035.461-43C132.20
spleen, embryo E18.CNhs11011.1271-21F235.56
spleen, neonate N10.CNhs11116.752-24D128.26
spleen, neonate N20.CNhs11112.824-19H123.51
spleen, neonate N25.CNhs11099.1354-25G318.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H6212.89
stomach, embryo E12.CNhs10588.356-43E342.55
stomach, embryo E15.CNhs10603.1252-16G852.05
stomach, embryo E16.CNhs11022.459-17D457.78
stomach, embryo E17.CNhs11006.1035-18D568.37
stomach, embryo E18.CNhs10999.1286-20C686.47
stomach, neonate N03.CNhs11193.1340-24B898.86
stomach, neonate N07.CNhs11210.718-18A989.68
stomach, neonate N25.CNhs11104.1355-25E4122.50
stomach, neonate N30.CNhs11134.1386-42I1212.83
submandibular gland, adult.CNhs10469.59-29C1147.26
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F529.01
testis, embryo E15.CNhs11034.443-27C535.57
testis, embryo E16.CNhs11033.470-26G535.58
testis, embryo E17.CNhs11029.486-18I539.52
testis, embryo E18.CNhs11027.503-18G542.58
testis, neonate N00.CNhs11189.1300-22B737.20
testis, neonate N07.CNhs11222.726-26I427.86
testis, neonate N10.CNhs11204.763-44D925.06
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I435.48
thymus, embryo E15.CNhs11005.430-45I231.63
thymus, embryo E16.CNhs11002.456-26C517.80
thymus, embryo E17.CNhs10581.478-18C119.69
thymus, embryo E18.CNhs10595.1273-19G416.49
thymus, neonate N02.CNhs11181.1541-43F811.06
thymus, neonate N03.CNhs11137.2104-43C710.63
thymus, neonate N06.CNhs11197.681-26C410.10
thymus, neonate N07.CNhs11211.713-19D310.67
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G76.25
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B499.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H372.37
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F757.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G577.23
urinary bladder, adult.CNhs10481.879-12E477.47
uterus, adult pregnant day19.CNhs10497.590-15F5137.38
uterus, adult.CNhs10509.92-27E5112.64
vagina, adult.CNhs10502.89-27D5145.98
vesicular gland, adult.CNhs10491.51-27F8102.32
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1171.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2152.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3175.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7183.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4231.56
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5248.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6217.36
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7244.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8280.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9300.82
whole body, embryo E11.CNhs11014.324-5I821.80
whole body, embryo E12.CNhs10587.857-27C941.10
whole body, embryo E13.CNhs10512.372-23H242.51
whole body, embryo E14.5.CNhs10578.420-27D267.83
whole body, embryo E14.CNhs10519.395-14B131.23
whole body, embryo E16.CNhs10514.453-14F237.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G579.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G567.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G578.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G572.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G567.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G565.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G557.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G558.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G562.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G560.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G556.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G560.16
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G564.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G576.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G553.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G554.13
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G572.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G563.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G566.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G559.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G557.61
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G560.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G593.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G558.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G556.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G558.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G559.03
whole body, embryo E17.5.CNhs10513.490-9F965.78
whole body, embryo E17.CNhs10517.475-3I575.69
whole body, embryo E18.CNhs10516.493-3B369.24
whole body, neonate N00.CNhs10525.657-19C272.84
whole body, neonate N01.CNhs10576.659-23C678.24
whole body, neonate N06.CNhs10515.692-21D181.62
whole body, neonate N10.CNhs10518.761-6B478.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism6.97e-1451
ectoderm-derived structure3.18e-1395
ectoderm3.18e-1395
presumptive ectoderm3.18e-1395
nervous system1.33e-1075
structure with developmental contribution from neural crest2.69e-1092
central nervous system4.15e-1073
neurectoderm1.72e-0964
neural plate1.72e-0964
presumptive neural plate1.72e-0964
ecto-epithelium2.29e-0973
regional part of nervous system3.21e-0954
neural tube2.93e-0852
neural rod2.93e-0852
future spinal cord2.93e-0852
neural keel2.93e-0852
gray matter3.35e-0834
occipital lobe1.24e-0710
visual cortex1.24e-0710
neocortex1.24e-0710
pre-chordal neural plate4.44e-0749
brain8.20e-0747
future brain8.20e-0747







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