FFCP PHASE1:Mm9::chr6:129187104..129187117,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:129187104..129187117,-|id=chr6:129187104..129187117,-|ontology_enrichment_celltype=CL:0000838!1.41e-11!12;CL:0000988!3.51e-11!32;CL:0002032!3.51e-11!32;CL:0000037!3.51e-11!32;CL:0000566!3.51e-11!32;CL:0000837!3.51e-11!32;CL:0000084!5.39e-11!11;CL:0000827!5.39e-11!11;CL:0000542!2.56e-10!13;CL:0000051!2.56e-10!13;CL:0002031!4.35e-10!25;CL:0000738!7.08e-10!17;CL:0002087!7.08e-10!17;CL:0002320!2.53e-09!46;CL:0000134!2.53e-09!46;CL:0000791!3.28e-09!9;CL:0000789!3.28e-09!9;CL:0002420!3.28e-09!9;CL:0002419!3.28e-09!9;CL:0000790!3.28e-09!9;CL:0000624!2.16e-08!8;CL:0000063!2.98e-07!66;CL:0000219!5.09e-07!54;CL:0000893!7.47e-07!6;CL:0002489!7.47e-07!6;CL:0000898!7.47e-07!6;CL:0000809!7.47e-07!6;CL:0000810!7.47e-07!6;CL:0000895!7.47e-07!6;CL:0000808!7.47e-07!6;CL:0000894!7.47e-07!6;CL:0000806!7.47e-07!6;CL:0000807!7.47e-07!6;CL:0000805!7.47e-07!6;CL:0002425!7.47e-07!6;CL:0002436!7.47e-07!6;CL:0002427!7.47e-07!6;CL:0002428!7.47e-07!6;CL:0002429!7.47e-07!6;CL:0002433!7.47e-07!6;CL:0002431!7.47e-07!6;CL:0002432!7.47e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,1.98e-21,11;CL:0000827,1.98e-21,11;CL:0000738,1.37e-19,17;CL:0002087,1.37e-19,17;CL:0000838,1.66e-19,12;CL:0000542,7.01e-18,13;CL:0000051,7.01e-18,13;CL:0002031,1.48e-17,25;CL:0000791,3.16e-16,9;CL:0000789,3.16e-16,9;CL:0002420,3.16e-16,9;CL:0002419,3.16e-16,9;CL:0000790,3.16e-16,9;CL:0000624,7.63e-14,8;CL:0000893,3.38e-13,6;CL:0002489,3.38e-13,6;CL:0000898,3.38e-13,6;CL:0000809,3.38e-13,6;CL:0000810,3.38e-13,6;CL:0000895,3.38e-13,6;CL:0000808,3.38e-13,6;CL:0000894,3.38e-13,6;CL:0000806,3.38e-13,6;CL:0000807,3.38e-13,6;CL:0000805,3.38e-13,6;CL:0002425,3.38e-13,6;CL:0002436,3.38e-13,6;CL:0002427,3.38e-13,6;CL:0002428,3.38e-13,6;CL:0002429,3.38e-13,6;CL:0002433,3.38e-13,6;CL:0002431,3.38e-13,6;CL:0002432,3.38e-13,6;CL:0000988,4.01e-13,32;CL:0002032,4.01e-13,32;CL:0000037,4.01e-13,32;CL:0000837,4.01e-13,32;CL:0002320,2.55e-08,46;CL:0000134,2.55e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.22e-09,3;DOID:4045,1.22e-09,3|ontology_enrichment_uberon=UBERON:0002193!4.38e-21!48;UBERON:0002390!7.75e-19!45;UBERON:0003061!7.75e-19!45;UBERON:0002405!1.35e-18!70;UBERON:0004177!1.19e-14!29;UBERON:0005057!7.19e-12!51;UBERON:0003408!8.62e-12!24;UBERON:0002370!3.34e-11!23;UBERON:0000974!3.34e-11!23;UBERON:0004807!3.34e-11!23;UBERON:0005058!3.34e-11!23;UBERON:0003351!3.34e-11!23;UBERON:0009113!3.34e-11!23;UBERON:0003295!3.34e-11!23;UBERON:0009722!3.34e-11!23;UBERON:0005562!3.34e-11!23;UBERON:0007690!3.34e-11!23;UBERON:0005911!8.36e-11!69;UBERON:0000490!1.38e-10!66;UBERON:0006562!1.94e-10!24;UBERON:0001557!1.94e-10!24;UBERON:0001042!1.94e-10!24;UBERON:0008814!1.94e-10!24;UBERON:0009145!1.94e-10!24;UBERON:0003081!2.12e-10!88;UBERON:0003929!4.00e-10!55;UBERON:0002384!2.53e-09!46;UBERON:0001004!4.60e-09!42;UBERON:0000065!1.44e-08!41;UBERON:0000072!1.64e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.74e-16,48;UBERON:0002405,5.74e-16,48;UBERON:0002390,4.38e-15,45;UBERON:0003061,4.38e-15,45;UBERON:0004177,1.23e-14,29;UBERON:0005057,1.23e-14,29;UBERON:0002370,1.15e-13,23;UBERON:0000974,1.15e-13,23;UBERON:0004807,1.15e-13,23;UBERON:0005058,1.15e-13,23;UBERON:0003351,1.15e-13,23;UBERON:0009113,1.15e-13,23;UBERON:0003295,1.15e-13,23;UBERON:0009722,1.15e-13,23;UBERON:0005562,1.15e-13,23;UBERON:0007690,1.15e-13,23;UBERON:0006562,5.25e-13,24;UBERON:0003408,5.25e-13,24;UBERON:0001557,5.25e-13,24;UBERON:0001042,5.25e-13,24;UBERON:0008814,5.25e-13,24;UBERON:0009145,5.25e-13,24;UBERON:0000077,1.14e-11,35;UBERON:0000072,2.54e-11,27;UBERON:0002384,2.55e-08,46;UBERON:0007811,5.84e-08,36;UBERON:0003081,5.22e-07,87;UBERON:0000490,5.34e-07,66;UBERON:0000065,9.78e-07,41|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,4.77756296733832,14.782815825925,10.7669682108117,6.50628279256919,3.90883579077148,3.0816131387617,0.699363219351979,0.333109761815663,0.202475267389826,0,1.57731082679119,1.64537320326887,0.42438965179803,0.17008658030214,2.87943758482567,3.6567970479451,0.639969691173627,0.68822784320151,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,6.27797446105362,9.37602413428561,1.57057123192139,22.3527965451785,6.83045484958446,9.22469670759192,0.377690453926732,0,0.367093504323363,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0.896053774194671,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,10.0985774622397,0.148442139064825,0,0.608930956624282,0,0,0,0,0,0,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0,0.469380496577004,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,3.01582567878545,1.08781136763742,0,0.551873492609465,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,1.87957968877638,0.206386867963223,0.370389054739423,0.376736914009382,0.956859594047176,2.0590035588587,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.129920822977795,0.358053391334963,1.39076948346885,0.841368146639782,0.738447635872886,1.9183625490148,0.838274873204998,0.907435666231565,2.63136277997332,2.50150788264857,2.68816875017609,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr6:129187104..129187117,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:129187104..129187117,- | |||
|id=chr6:129187104..129187117,- | |||
|ontology_enrichment_celltype=CL:0000838!1.41e-11!12;CL:0000988!3.51e-11!32;CL:0002032!3.51e-11!32;CL:0000037!3.51e-11!32;CL:0000566!3.51e-11!32;CL:0000837!3.51e-11!32;CL:0000084!5.39e-11!11;CL:0000827!5.39e-11!11;CL:0000542!2.56e-10!13;CL:0000051!2.56e-10!13;CL:0002031!4.35e-10!25;CL:0000738!7.08e-10!17;CL:0002087!7.08e-10!17;CL:0002320!2.53e-09!46;CL:0000134!2.53e-09!46;CL:0000791!3.28e-09!9;CL:0000789!3.28e-09!9;CL:0002420!3.28e-09!9;CL:0002419!3.28e-09!9;CL:0000790!3.28e-09!9;CL:0000624!2.16e-08!8;CL:0000063!2.98e-07!66;CL:0000219!5.09e-07!54;CL:0000893!7.47e-07!6;CL:0002489!7.47e-07!6;CL:0000898!7.47e-07!6;CL:0000809!7.47e-07!6;CL:0000810!7.47e-07!6;CL:0000895!7.47e-07!6;CL:0000808!7.47e-07!6;CL:0000894!7.47e-07!6;CL:0000806!7.47e-07!6;CL:0000807!7.47e-07!6;CL:0000805!7.47e-07!6;CL:0002425!7.47e-07!6;CL:0002436!7.47e-07!6;CL:0002427!7.47e-07!6;CL:0002428!7.47e-07!6;CL:0002429!7.47e-07!6;CL:0002433!7.47e-07!6;CL:0002431!7.47e-07!6;CL:0002432!7.47e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.98e-21,11;CL:0000827,1.98e-21,11;CL:0000738,1.37e-19,17;CL:0002087,1.37e-19,17;CL:0000838,1.66e-19,12;CL:0000542,7.01e-18,13;CL:0000051,7.01e-18,13;CL:0002031,1.48e-17,25;CL:0000791,3.16e-16,9;CL:0000789,3.16e-16,9;CL:0002420,3.16e-16,9;CL:0002419,3.16e-16,9;CL:0000790,3.16e-16,9;CL:0000624,7.63e-14,8;CL:0000893,3.38e-13,6;CL:0002489,3.38e-13,6;CL:0000898,3.38e-13,6;CL:0000809,3.38e-13,6;CL:0000810,3.38e-13,6;CL:0000895,3.38e-13,6;CL:0000808,3.38e-13,6;CL:0000894,3.38e-13,6;CL:0000806,3.38e-13,6;CL:0000807,3.38e-13,6;CL:0000805,3.38e-13,6;CL:0002425,3.38e-13,6;CL:0002436,3.38e-13,6;CL:0002427,3.38e-13,6;CL:0002428,3.38e-13,6;CL:0002429,3.38e-13,6;CL:0002433,3.38e-13,6;CL:0002431,3.38e-13,6;CL:0002432,3.38e-13,6;CL:0000988,4.01e-13,32;CL:0002032,4.01e-13,32;CL:0000037,4.01e-13,32;CL:0000837,4.01e-13,32;CL:0002320,2.55e-08,46;CL:0000134,2.55e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.22e-09,3;DOID:4045,1.22e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.38e-21!48;UBERON:0002390!7.75e-19!45;UBERON:0003061!7.75e-19!45;UBERON:0002405!1.35e-18!70;UBERON:0004177!1.19e-14!29;UBERON:0005057!7.19e-12!51;UBERON:0003408!8.62e-12!24;UBERON:0002370!3.34e-11!23;UBERON:0000974!3.34e-11!23;UBERON:0004807!3.34e-11!23;UBERON:0005058!3.34e-11!23;UBERON:0003351!3.34e-11!23;UBERON:0009113!3.34e-11!23;UBERON:0003295!3.34e-11!23;UBERON:0009722!3.34e-11!23;UBERON:0005562!3.34e-11!23;UBERON:0007690!3.34e-11!23;UBERON:0005911!8.36e-11!69;UBERON:0000490!1.38e-10!66;UBERON:0006562!1.94e-10!24;UBERON:0001557!1.94e-10!24;UBERON:0001042!1.94e-10!24;UBERON:0008814!1.94e-10!24;UBERON:0009145!1.94e-10!24;UBERON:0003081!2.12e-10!88;UBERON:0003929!4.00e-10!55;UBERON:0002384!2.53e-09!46;UBERON:0001004!4.60e-09!42;UBERON:0000065!1.44e-08!41;UBERON:0000072!1.64e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.74e-16,48;UBERON:0002405,5.74e-16,48;UBERON:0002390,4.38e-15,45;UBERON:0003061,4.38e-15,45;UBERON:0004177,1.23e-14,29;UBERON:0005057,1.23e-14,29;UBERON:0002370,1.15e-13,23;UBERON:0000974,1.15e-13,23;UBERON:0004807,1.15e-13,23;UBERON:0005058,1.15e-13,23;UBERON:0003351,1.15e-13,23;UBERON:0009113,1.15e-13,23;UBERON:0003295,1.15e-13,23;UBERON:0009722,1.15e-13,23;UBERON:0005562,1.15e-13,23;UBERON:0007690,1.15e-13,23;UBERON:0006562,5.25e-13,24;UBERON:0003408,5.25e-13,24;UBERON:0001557,5.25e-13,24;UBERON:0001042,5.25e-13,24;UBERON:0008814,5.25e-13,24;UBERON:0009145,5.25e-13,24;UBERON:0000077,1.14e-11,35;UBERON:0000072,2.54e-11,27;UBERON:0002384,2.55e-08,46;UBERON:0007811,5.84e-08,36;UBERON:0003081,5.22e-07,87;UBERON:0000490,5.34e-07,66;UBERON:0000065,9.78e-07,41 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,4.77756296733832,14.782815825925,10.7669682108117,6.50628279256919,3.90883579077148,3.0816131387617,0.699363219351979,0.333109761815663,0.202475267389826,0,1.57731082679119,1.64537320326887,0.42438965179803,0.17008658030214,2.87943758482567,3.6567970479451,0.639969691173627,0.68822784320151,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,6.27797446105362,9.37602413428561,1.57057123192139,22.3527965451785,6.83045484958446,9.22469670759192,0.377690453926732,0,0.367093504323363,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0.896053774194671,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,10.0985774622397,0.148442139064825,0,0.608930956624282,0,0,0,0,0,0,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0,0.469380496577004,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,3.01582567878545,1.08781136763742,0,0.551873492609465,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,1.87957968877638,0.206386867963223,0.370389054739423,0.376736914009382,0.956859594047176,2.0590035588587,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.129920822977795,0.358053391334963,1.39076948346885,0.841368146639782,0.738447635872886,1.9183625490148,0.838274873204998,0.907435666231565,2.63136277997332,2.50150788264857,2.68816875017609,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:129187104..129187117,- | |||
}} |
Revision as of 09:04, 14 September 2013
Short description: | p@chr6:129187104..129187117, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129187104..129187117, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.74e-16 | 48 |
immune system | 5.74e-16 | 48 |
hematopoietic system | 4.38e-15 | 45 |
blood island | 4.38e-15 | 45 |
hemopoietic organ | 1.23e-14 | 29 |
immune organ | 1.23e-14 | 29 |
thymus | 1.15e-13 | 23 |
neck | 1.15e-13 | 23 |
respiratory system epithelium | 1.15e-13 | 23 |
hemolymphoid system gland | 1.15e-13 | 23 |
pharyngeal epithelium | 1.15e-13 | 23 |
thymic region | 1.15e-13 | 23 |
pharyngeal gland | 1.15e-13 | 23 |
entire pharyngeal arch endoderm | 1.15e-13 | 23 |
thymus primordium | 1.15e-13 | 23 |
early pharyngeal endoderm | 1.15e-13 | 23 |
pharynx | 5.25e-13 | 24 |
gland of gut | 5.25e-13 | 24 |
upper respiratory tract | 5.25e-13 | 24 |
chordate pharynx | 5.25e-13 | 24 |
pharyngeal arch system | 5.25e-13 | 24 |
pharyngeal region of foregut | 5.25e-13 | 24 |
mixed endoderm/mesoderm-derived structure | 1.14e-11 | 35 |
segment of respiratory tract | 2.54e-11 | 27 |
connective tissue | 2.55e-08 | 46 |
craniocervical region | 5.84e-08 | 36 |
lateral plate mesoderm | 5.22e-07 | 87 |
unilaminar epithelium | 5.34e-07 | 66 |
respiratory tract | 9.78e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.22e-09 | 3 |
muscle cancer | 1.22e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.